RNA–Protein interactions for RNA: ENST00000636525.1

CLN5-211, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-211ENST00000636525 ALS2Q96Q42 1657 aa23.2■■□□□ 1.3
CLN5-211ENST00000636525 NECTIN2Q92692 538 aa23.19■■□□□ 1.3
CLN5-211ENST00000636525 NCOA3Q9Y6Q9 1424 aa23.19■■□□□ 1.3
CLN5-211ENST00000636525 LRRC37A3O60309 1634 aa23.19■■□□□ 1.3
CLN5-211ENST00000636525 MRE11P49959 708 aa23.19■■□□□ 1.3
CLN5-211ENST00000636525 GZF1Q9H116 711 aaPredicted RBP23.19■■□□□ 1.3
CLN5-211ENST00000636525 TAF7Q15545 349 aaPredicted RBP23.17■■□□□ 1.3
CLN5-211ENST00000636525 SIRT2Q8IXJ6 389 aa23.17■■□□□ 1.3
CLN5-211ENST00000636525 XIRP1Q702N8 1843 aaKnown RBP23.17■■□□□ 1.3
CLN5-211ENST00000636525 NPHP3Q7Z494 1330 aa23.16■■□□□ 1.3
CLN5-211ENST00000636525 SMC5Q8IY18 1101 aa23.16■■□□□ 1.3
CLN5-211ENST00000636525 MPRIPQ6WCQ1 1025 aa23.16■■□□□ 1.3
CLN5-211ENST00000636525 HAP1P54257 671 aaPredicted RBP23.15■■□□□ 1.3
CLN5-211ENST00000636525 ZNF530Q6P9A1 599 aaPredicted RBP23.15■■□□□ 1.3
CLN5-211ENST00000636525 BRINP3Q76B58 766 aa23.15■■□□□ 1.3
CLN5-211ENST00000636525 CEMIPQ8WUJ3 1361 aa23.15■■□□□ 1.3
CLN5-211ENST00000636525 ERBB3P21860 1342 aa23.15■■□□□ 1.3
CLN5-211ENST00000636525 TRAK2O60296 914 aa23.15■■□□□ 1.3
CLN5-211ENST00000636525 PXDNQ92626 1479 aa23.15■■□□□ 1.3
CLN5-211ENST00000636525 RGPD5Q99666 1765 aa23.14■■□□□ 1.3
CLN5-211ENST00000636525 CHRNA2Q15822 529 aa23.14■■□□□ 1.3
CLN5-211ENST00000636525 F6X3S4 739 aa23.14■■□□□ 1.29
CLN5-211ENST00000636525 INTS3Q68E01 1043 aaKnown RBP23.13■■□□□ 1.29
CLN5-211ENST00000636525 CHMP5Q9NZZ3 219 aa23.13■■□□□ 1.29
CLN5-211ENST00000636525 KCNQ3O43525 872 aa23.12■■□□□ 1.29
CLN5-211ENST00000636525 NCAPD2Q15021 1401 aa23.12■■□□□ 1.29
CLN5-211ENST00000636525 PLEKHO1Q53GL0 409 aaPredicted RBP23.11■■□□□ 1.29
CLN5-211ENST00000636525 SPATA31A3Q5VYP0 1347 aa23.11■■□□□ 1.29
CLN5-211ENST00000636525 ESPNB1AK53 854 aa23.11■■□□□ 1.29
CLN5-211ENST00000636525 SPRYD3Q8NCJ5 442 aa23.11■■□□□ 1.29
CLN5-211ENST00000636525 ISY1Q9ULR0 285 aaKnown RBP23.11■■□□□ 1.29
CLN5-211ENST00000636525 TNS3Q68CZ2 1445 aa23.1■■□□□ 1.29
CLN5-211ENST00000636525 PTPRCP08575 1304 aa23.1■■□□□ 1.29
CLN5-211ENST00000636525 AKAP4Q5JQC9 854 aa23.1■■□□□ 1.29
CLN5-211ENST00000636525 GRPEL1Q9HAV7 217 aa23.1■■□□□ 1.29
CLN5-211ENST00000636525 NLRP2Q9NX02 1062 aa23.09■■□□□ 1.29
CLN5-211ENST00000636525 SLC4A10Q6U841 1118 aa23.08■■□□□ 1.29
CLN5-211ENST00000636525 LNPKQ9C0E8 428 aa23.08■■□□□ 1.29
CLN5-211ENST00000636525 SLAIN2Q9P270 581 aa23.08■■□□□ 1.29
CLN5-211ENST00000636525 MEIS3Q99687 375 aa23.08■■□□□ 1.28
CLN5-211ENST00000636525 NUCB1Q02818 461 aa23.07■■□□□ 1.28
CLN5-211ENST00000636525 AMOTQ4VCS5 1084 aa23.07■■□□□ 1.28
CLN5-211ENST00000636525 STK31Q9BXU1 1019 aa23.07■■□□□ 1.28
CLN5-211ENST00000636525 CCDC30Q5VVM6 783 aa23.06■■□□□ 1.28
CLN5-211ENST00000636525 CHMP4BQ9H444 224 aaKnown RBP23.06■■□□□ 1.28
CLN5-211ENST00000636525 RNMTO43148 476 aaKnown RBP23.06■■□□□ 1.28
CLN5-211ENST00000636525 EIF4A1P60842 406 aaKnown RBP23.06■■□□□ 1.28
CLN5-211ENST00000636525 BABAM1Q9NWV8 329 aa23.06■■□□□ 1.28
CLN5-211ENST00000636525 DDX11L8A8MPP1 907 aa23.05■■□□□ 1.28
CLN5-211ENST00000636525 TEFQ10587 303 aa23.05■■□□□ 1.28
CLN5-211ENST00000636525 FLIIQ13045 1269 aa23.05■■□□□ 1.28
CLN5-211ENST00000636525 C1orf141Q5JVX7 400 aa23.05■■□□□ 1.28
CLN5-211ENST00000636525 ERBB4Q15303 1308 aa23.04■■□□□ 1.28
CLN5-211ENST00000636525 BTBD11A6QL63 1104 aa23.04■■□□□ 1.28
CLN5-211ENST00000636525 EIF2S2P20042 333 aaKnown RBP23.04■■□□□ 1.28
CLN5-211ENST00000636525 ANKRD45Q5TZF3 282 aa23.04■■□□□ 1.28
CLN5-211ENST00000636525 CHD1LQ86WJ1 897 aa23.04■■□□□ 1.28
CLN5-211ENST00000636525 CAMTA1Q9Y6Y1 1673 aa23.04■■□□□ 1.28
CLN5-211ENST00000636525 LMO7Q8WWI1 1683 aa23.03■■□□□ 1.28
CLN5-211ENST00000636525 FKBP5Q13451 457 aaPredicted RBP23.03■■□□□ 1.28
CLN5-211ENST00000636525 HDGFL1Q5TGJ6 251 aa23.03■■□□□ 1.28
CLN5-211ENST00000636525 PHAXQ9H814 394 aaKnown RBP23.03■■□□□ 1.28
CLN5-211ENST00000636525 CSB-PGBD3P0DP91 1061 aa23.03■■□□□ 1.28
CLN5-211ENST00000636525 COL18A1P39060 1754 aa23.02■■□□□ 1.28
CLN5-211ENST00000636525 TPM2P07951 284 aa23.02■■□□□ 1.27
CLN5-211ENST00000636525 C22orf23Q9BZE7 217 aa23.01■■□□□ 1.27
CLN5-211ENST00000636525 ATP10DQ9P241 1426 aa23.01■■□□□ 1.27
CLN5-211ENST00000636525 TRIM44Q96DX7 344 aaPredicted RBP23.01■■□□□ 1.27
CLN5-211ENST00000636525 RAPGEF4Q8WZA2 1011 aa23■■□□□ 1.27
CLN5-211ENST00000636525 FAM208AQ9UK61 1670 aaKnown RBP23■■□□□ 1.27
CLN5-211ENST00000636525 GCC1Q96CN9 775 aa23■■□□□ 1.27
CLN5-211ENST00000636525 MEGF6O75095 1541 aa22.99■■□□□ 1.27
CLN5-211ENST00000636525 PRAMEF22A3QJZ6 481 aa22.99■■□□□ 1.27
CLN5-211ENST00000636525 CEP85Q6P2H3 762 aa22.99■■□□□ 1.27
CLN5-211ENST00000636525 ANXA1P04083 346 aa22.99■■□□□ 1.27
CLN5-211ENST00000636525 CRYBG1Q9Y4K1 1723 aa22.98■■□□□ 1.27
CLN5-211ENST00000636525 SOS2Q07890 1332 aaPredicted RBP22.98■■□□□ 1.27
CLN5-211ENST00000636525 CHPF2Q9P2E5 772 aa22.98■■□□□ 1.27
CLN5-211ENST00000636525 ANKRD44Q8N8A2 993 aa22.97■■□□□ 1.27
CLN5-211ENST00000636525 KDM3BQ7LBC6 1761 aa22.96■■□□□ 1.27
CLN5-211ENST00000636525 CCT4P50991 539 aaKnown RBP22.96■■□□□ 1.27
CLN5-211ENST00000636525 HSCBQ8IWL3 235 aa22.96■■□□□ 1.27
CLN5-211ENST00000636525 DCTPP1Q9H773 170 aa22.95■■□□□ 1.26
CLN5-211ENST00000636525 SOS1Q07889 1333 aaPredicted RBP22.95■■□□□ 1.26
CLN5-211ENST00000636525 CPDO75976 1380 aa22.95■■□□□ 1.26
CLN5-211ENST00000636525 MFAP1P55081 439 aaKnown RBP22.95■■□□□ 1.26
CLN5-211ENST00000636525 PDCL3Q9H2J4 239 aa22.95■■□□□ 1.26
CLN5-211ENST00000636525 TATP17735 454 aaPredicted RBP22.94■■□□□ 1.26
CLN5-211ENST00000636525 PHKG2P15735 406 aa22.93■■□□□ 1.26
CLN5-211ENST00000636525 SLC39A6Q13433 755 aa22.93■■□□□ 1.26
CLN5-211ENST00000636525 RPAP2Q8IXW5 612 aaPredicted RBP22.93■■□□□ 1.26
CLN5-211ENST00000636525 PRDM11Q9NQV5 511 aa22.93■■□□□ 1.26
CLN5-211ENST00000636525 KDM6AO15550 1401 aaPredicted RBP22.93■■□□□ 1.26
CLN5-211ENST00000636525 APBB1O00213 710 aa22.92■■□□□ 1.26
CLN5-211ENST00000636525 CYP27B1O15528 508 aa22.92■■□□□ 1.26
CLN5-211ENST00000636525 DDIT3P35638 169 aa22.92■■□□□ 1.26
CLN5-211ENST00000636525 C16orf71Q8IYS4 520 aaPredicted RBP22.92■■□□□ 1.26
CLN5-211ENST00000636525 GIGYF1O75420 1035 aaPredicted RBP22.91■■□□□ 1.26
CLN5-211ENST00000636525 NFATC2IPQ8NCF5 419 aa22.91■■□□□ 1.26
CLN5-211ENST00000636525 PROSER3Q2NL68 480 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms