RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 LRRCC1Q9C099 1032 aa17.92■□□□□ 0.46
CACNA1A-220ENST00000635988 STAG3Q9UJ98 1225 aa17.92■□□□□ 0.46
CACNA1A-220ENST00000635988 KRT24Q2M2I5 525 aa17.92■□□□□ 0.46
CACNA1A-220ENST00000635988 PODXL2Q9NZ53 605 aa17.92■□□□□ 0.46
CACNA1A-220ENST00000635988 NRKQ7Z2Y5 1582 aa17.91■□□□□ 0.46
CACNA1A-220ENST00000635988 MX1P20591 662 aa17.91■□□□□ 0.46
CACNA1A-220ENST00000635988 CHMLP26374 656 aa17.91■□□□□ 0.46
CACNA1A-220ENST00000635988 ANO2Q9NQ90 1003 aa17.91■□□□□ 0.46
CACNA1A-220ENST00000635988 PRDM4Q9UKN5 801 aa17.91■□□□□ 0.46
CACNA1A-220ENST00000635988 CCDC183Q5T5S1 534 aa17.9■□□□□ 0.46
CACNA1A-220ENST00000635988 CCDC94Q9BW85 323 aaPredicted RBP17.9■□□□□ 0.46
CACNA1A-220ENST00000635988 ZRANB1Q9UGI0 708 aa17.9■□□□□ 0.46
CACNA1A-220ENST00000635988 SULT6B1Q6IMI4 303 aa17.9■□□□□ 0.46
CACNA1A-220ENST00000635988 USP48Q86UV5 1035 aa17.9■□□□□ 0.46
CACNA1A-220ENST00000635988 GTF2F1P35269 517 aaKnown RBP eCLIP17.89■□□□□ 0.45
CACNA1A-220ENST00000635988 STAP2Q9UGK3 403 aa17.89■□□□□ 0.45
CACNA1A-220ENST00000635988 PALD1Q9ULE6 856 aa17.89■□□□□ 0.45
CACNA1A-220ENST00000635988 ARHGEF10O15013 1369 aa17.89■□□□□ 0.45
CACNA1A-220ENST00000635988 AOX1Q06278 1338 aa17.89■□□□□ 0.45
CACNA1A-220ENST00000635988 CCDC61Q9Y6R9 512 aa17.89■□□□□ 0.45
CACNA1A-220ENST00000635988 GNAI3P08754 354 aa17.88■□□□□ 0.45
CACNA1A-220ENST00000635988 NOLC1Q14978 699 aaKnown RBP eCLIP17.88■□□□□ 0.45
CACNA1A-220ENST00000635988 MON2Q7Z3U7 1717 aa17.88■□□□□ 0.45
CACNA1A-220ENST00000635988 EIF4A2Q14240 407 aaKnown RBP17.88■□□□□ 0.45
CACNA1A-220ENST00000635988 SLC4A10Q6U841 1118 aa17.88■□□□□ 0.45
CACNA1A-220ENST00000635988 MCM10Q7L590 875 aa17.88■□□□□ 0.45
CACNA1A-220ENST00000635988 TRIM6-TRIM34B2RNG4 842 aa17.87■□□□□ 0.45
CACNA1A-220ENST00000635988 NUDT16Q96DE0 195 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-220ENST00000635988 EXOC6BQ9Y2D4 811 aa17.87■□□□□ 0.45
CACNA1A-220ENST00000635988 CPS1P31327 1500 aa17.87■□□□□ 0.45
CACNA1A-220ENST00000635988 GADD45BO75293 160 aaPredicted RBP17.87■□□□□ 0.45
CACNA1A-220ENST00000635988 RILPL2Q969X0 211 aa17.87■□□□□ 0.45
CACNA1A-220ENST00000635988 CRB1P82279 1406 aa17.86■□□□□ 0.45
CACNA1A-220ENST00000635988 RIMBP3CA6NJZ7 1639 aa17.86■□□□□ 0.45
CACNA1A-220ENST00000635988 RIMBP3BA6NNM3 1639 aa17.86■□□□□ 0.45
CACNA1A-220ENST00000635988 RIMBP3Q9UFD9 1639 aa17.86■□□□□ 0.45
CACNA1A-220ENST00000635988 AEBP1Q8IUX7 1158 aa17.86■□□□□ 0.45
CACNA1A-220ENST00000635988 TUBGCP6Q96RT7 1819 aa17.86■□□□□ 0.45
CACNA1A-220ENST00000635988 NOL8Q76FK4 1167 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-220ENST00000635988 ATP6V1DQ9Y5K8 247 aa17.86■□□□□ 0.45
CACNA1A-220ENST00000635988 ADCY5O95622 1261 aa17.85■□□□□ 0.45
CACNA1A-220ENST00000635988 UBE2HP62256 183 aa17.85■□□□□ 0.45
CACNA1A-220ENST00000635988 ATP8B2P98198 1209 aa17.85■□□□□ 0.45
CACNA1A-220ENST00000635988 SPTLC3Q9NUV7 552 aa17.85■□□□□ 0.45
CACNA1A-220ENST00000635988 USP25Q9UHP3 1055 aa17.85■□□□□ 0.45
CACNA1A-220ENST00000635988 TPM3P06753 285 aa17.84■□□□□ 0.45
CACNA1A-220ENST00000635988 HSPA4P34932 840 aa17.84■□□□□ 0.45
CACNA1A-220ENST00000635988 C3P01024 1663 aa17.84■□□□□ 0.45
CACNA1A-220ENST00000635988 FBXO31Q5XUX0 539 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-220ENST00000635988 STK31Q9BXU1 1019 aa17.84■□□□□ 0.45
CACNA1A-220ENST00000635988 UPF3BQ9BZI7 483 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-220ENST00000635988 GDPD2Q9HCC8 539 aa17.84■□□□□ 0.45
CACNA1A-220ENST00000635988 RPAP1Q9BWH6 1393 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-220ENST00000635988 RICTORQ6R327 1708 aa17.83■□□□□ 0.45
CACNA1A-220ENST00000635988 F6X3S4 739 aa17.83■□□□□ 0.44
CACNA1A-220ENST00000635988 SETD1AO15047 1707 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-220ENST00000635988 ZSCAN22P10073 491 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-220ENST00000635988 FKBP5Q13451 457 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-220ENST00000635988 UTP14CQ5TAP6 766 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-220ENST00000635988 TSHZ3Q63HK5 1081 aa17.82■□□□□ 0.44
CACNA1A-220ENST00000635988 G2E3Q7L622 706 aa17.82■□□□□ 0.44
CACNA1A-220ENST00000635988 SIRT1Q96EB6 747 aa17.82■□□□□ 0.44
CACNA1A-220ENST00000635988 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-220ENST00000635988 KDM4AO75164 1064 aa17.82■□□□□ 0.44
CACNA1A-220ENST00000635988 RTF1Q92541 710 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-220ENST00000635988 TSPYL4Q9UJ04 414 aa17.82■□□□□ 0.44
CACNA1A-220ENST00000635988 KIF3AQ9Y496 699 aa17.82■□□□□ 0.44
CACNA1A-220ENST00000635988 TTC21BQ7Z4L5 1316 aa17.81■□□□□ 0.44
CACNA1A-220ENST00000635988 AKAP12Q02952 1782 aa17.81■□□□□ 0.44
CACNA1A-220ENST00000635988 FOXD4L6Q3SYB3 417 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-220ENST00000635988 FOXD4L3Q6VB84 417 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-220ENST00000635988 A2ML1A8K2U0 1454 aa17.81■□□□□ 0.44
CACNA1A-220ENST00000635988 ITSN1Q15811 1721 aa17.8■□□□□ 0.44
CACNA1A-220ENST00000635988 HCLS1P14317 486 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-220ENST00000635988 TTC12Q9H892 705 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-220ENST00000635988 DIAPH3Q9NSV4 1193 aa17.8■□□□□ 0.44
CACNA1A-220ENST00000635988 CNPY2Q9Y2B0 182 aa17.79■□□□□ 0.44
CACNA1A-220ENST00000635988 PNMA6EA0A0J9YXQ4 647 aa17.79■□□□□ 0.44
CACNA1A-220ENST00000635988 STX6O43752 255 aa17.79■□□□□ 0.44
CACNA1A-220ENST00000635988 ZNF830Q96NB3 372 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-220ENST00000635988 PPP6R1Q9UPN7 881 aa17.79■□□□□ 0.44
CACNA1A-220ENST00000635988 CHAF1AQ13111 956 aaPredicted RBP17.78■□□□□ 0.44
CACNA1A-220ENST00000635988 LIMCH1Q9UPQ0 1083 aa17.78■□□□□ 0.44
CACNA1A-220ENST00000635988 SOS1Q07889 1333 aaPredicted RBP17.78■□□□□ 0.44
CACNA1A-220ENST00000635988 RAD50Q92878 1312 aa17.78■□□□□ 0.44
CACNA1A-220ENST00000635988 SPATA31D1Q6ZQQ2 1576 aa17.78■□□□□ 0.44
CACNA1A-220ENST00000635988 GOLGA6L6A8MZA4 724 aa17.78■□□□□ 0.44
CACNA1A-220ENST00000635988 RAB11FIP3O75154 756 aa17.78■□□□□ 0.44
CACNA1A-220ENST00000635988 CCDC30Q5VVM6 783 aa17.78■□□□□ 0.44
CACNA1A-220ENST00000635988 F13A1P00488 732 aa17.77■□□□□ 0.44
CACNA1A-220ENST00000635988 DMTNQ08495 405 aa17.77■□□□□ 0.44
CACNA1A-220ENST00000635988 ARID3AQ99856 593 aa17.77■□□□□ 0.44
CACNA1A-220ENST00000635988 RGPD1P0DJD0 1748 aa17.77■□□□□ 0.44
CACNA1A-220ENST00000635988 FLIIQ13045 1269 aa17.77■□□□□ 0.44
CACNA1A-220ENST00000635988 UNC5CLQ8IV45 518 aa17.77■□□□□ 0.44
CACNA1A-220ENST00000635988 ZNF710Q8N1W2 664 aa17.77■□□□□ 0.44
CACNA1A-220ENST00000635988 TTC14Q96N46 770 aa17.77■□□□□ 0.44
CACNA1A-220ENST00000635988 SMC3Q9UQE7 1217 aa17.77■□□□□ 0.44
CACNA1A-220ENST00000635988 SYT1P21579 422 aa17.76■□□□□ 0.43
CACNA1A-220ENST00000635988 FUCA2Q9BTY2 467 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms