RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 NLRP6P59044 892 aa13.11□□□□□ -0.31
PSPC1-207ENST00000635251 ZGPATQ8N5A5 531 aaKnown RBP13.11□□□□□ -0.31
PSPC1-207ENST00000635251 KDRP35968 1356 aa13.11□□□□□ -0.31
PSPC1-207ENST00000635251 GNAT3A8MTJ3 354 aa13.11□□□□□ -0.31
PSPC1-207ENST00000635251 TSHZ3Q63HK5 1081 aa13.11□□□□□ -0.31
PSPC1-207ENST00000635251 ANP32BQ92688 251 aaKnown RBP13.11□□□□□ -0.31
PSPC1-207ENST00000635251 CEP170BQ9Y4F5 1589 aaPredicted RBP13.11□□□□□ -0.31
PSPC1-207ENST00000635251 ESPNB1AK53 854 aa13.1□□□□□ -0.31
PSPC1-207ENST00000635251 TRIM6-TRIM34B2RNG4 842 aa13.1□□□□□ -0.31
PSPC1-207ENST00000635251 HTATSF1O43719 755 aaKnown RBP13.1□□□□□ -0.31
PSPC1-207ENST00000635251 PLEKHG5O94827 1062 aa13.1□□□□□ -0.31
PSPC1-207ENST00000635251 PKP1Q13835 747 aa13.1□□□□□ -0.31
PSPC1-207ENST00000635251 NUTM2GQ5VZR2 741 aa13.1□□□□□ -0.31
PSPC1-207ENST00000635251 RILPL2Q969X0 211 aa13.1□□□□□ -0.31
PSPC1-207ENST00000635251 NAP1L5Q96NT1 182 aaPredicted RBP13.1□□□□□ -0.31
PSPC1-207ENST00000635251 MX1P20591 662 aa13.1□□□□□ -0.31
PSPC1-207ENST00000635251 MCCP23508 829 aa13.1□□□□□ -0.31
PSPC1-207ENST00000635251 CYP2E1P05181 493 aaPredicted RBP13.09□□□□□ -0.31
PSPC1-207ENST00000635251 NASPP49321 788 aaPredicted RBP13.09□□□□□ -0.31
PSPC1-207ENST00000635251 NEK4P51957 841 aa13.09□□□□□ -0.31
PSPC1-207ENST00000635251 LTV1Q96GA3 475 aaPredicted RBP13.09□□□□□ -0.31
PSPC1-207ENST00000635251 PNMA6EA0A0J9YXQ4 647 aa13.09□□□□□ -0.31
PSPC1-207ENST00000635251 ATP8B2P98198 1209 aa13.09□□□□□ -0.31
PSPC1-207ENST00000635251 CAVIN1Q6NZI2 390 aaKnown RBP13.09□□□□□ -0.31
PSPC1-207ENST00000635251 AK9Q5TCS8 1911 aa13.08□□□□□ -0.32
PSPC1-207ENST00000635251 ESYT1Q9BSJ8 1104 aa13.08□□□□□ -0.32
PSPC1-207ENST00000635251 LMBRD1Q9NUN5 540 aa13.08□□□□□ -0.32
PSPC1-207ENST00000635251 IBTKQ9P2D0 1353 aaPredicted RBP13.08□□□□□ -0.32
PSPC1-207ENST00000635251 HOXC9P31274 260 aa13.08□□□□□ -0.32
PSPC1-207ENST00000635251 CCDC173Q0VFZ6 552 aa13.08□□□□□ -0.32
PSPC1-207ENST00000635251 ANO2Q9NQ90 1003 aa13.08□□□□□ -0.32
PSPC1-207ENST00000635251 TBX22Q9Y458 520 aa13.08□□□□□ -0.32
PSPC1-207ENST00000635251 LRRFIP2Q9Y608 721 aaKnown RBP13.08□□□□□ -0.32
PSPC1-207ENST00000635251 DIP2AQ14689 1571 aa13.07□□□□□ -0.32
PSPC1-207ENST00000635251 PRPF40AO75400 957 aaKnown RBP13.07□□□□□ -0.32
PSPC1-207ENST00000635251 C14orf37Q86TY3 774 aa13.07□□□□□ -0.32
PSPC1-207ENST00000635251 MAP3K5Q99683 1374 aa13.06□□□□□ -0.32
PSPC1-207ENST00000635251 UBTFL1P0CB47 393 aaPredicted RBP13.06□□□□□ -0.32
PSPC1-207ENST00000635251 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
PSPC1-207ENST00000635251 KIF13AQ9H1H9 1805 aa13.06□□□□□ -0.32
PSPC1-207ENST00000635251 SALL3Q9BXA9 1300 aa13.06□□□□□ -0.32
PSPC1-207ENST00000635251 MCM2P49736 904 aa13.06□□□□□ -0.32
PSPC1-207ENST00000635251 TAF7Q15545 349 aaPredicted RBP13.06□□□□□ -0.32
PSPC1-207ENST00000635251 FOXD4L5Q5VV16 416 aaPredicted RBP13.06□□□□□ -0.32
PSPC1-207ENST00000635251 FOXD4L4Q8WXT5 416 aaPredicted RBP13.06□□□□□ -0.32
PSPC1-207ENST00000635251 SRCIN1Q9C0H9 1055 aa13.06□□□□□ -0.32
PSPC1-207ENST00000635251 ERBB4Q15303 1308 aa13.06□□□□□ -0.32
PSPC1-207ENST00000635251 PIK3C2AO00443 1686 aa13.05□□□□□ -0.32
PSPC1-207ENST00000635251 CHMLP26374 656 aa13.05□□□□□ -0.32
PSPC1-207ENST00000635251 ZNF445P59923 1031 aa13.05□□□□□ -0.32
PSPC1-207ENST00000635251 ZSCAN23Q3MJ62 389 aa13.05□□□□□ -0.32
PSPC1-207ENST00000635251 NOL8Q76FK4 1167 aaKnown RBP13.05□□□□□ -0.32
PSPC1-207ENST00000635251 ABTB2Q8N961 1025 aa13.05□□□□□ -0.32
PSPC1-207ENST00000635251 IL17REQ8NFR9 667 aa13.05□□□□□ -0.32
PSPC1-207ENST00000635251 TMX3Q96JJ7 454 aa13.05□□□□□ -0.32
PSPC1-207ENST00000635251 FAM208AQ9UK61 1670 aaKnown RBP13.05□□□□□ -0.32
PSPC1-207ENST00000635251 HDGFL1Q5TGJ6 251 aa13.05□□□□□ -0.32
PSPC1-207ENST00000635251 ZDHHC9Q9Y397 364 aa13.05□□□□□ -0.32
PSPC1-207ENST00000635251 SOS1Q07889 1333 aaPredicted RBP13.05□□□□□ -0.32
PSPC1-207ENST00000635251 RGPD8O14715 1765 aaPredicted RBP13.04□□□□□ -0.32
PSPC1-207ENST00000635251 LRRC37A3O60309 1634 aa13.04□□□□□ -0.32
PSPC1-207ENST00000635251 USHBP1Q8N6Y0 703 aa13.04□□□□□ -0.32
PSPC1-207ENST00000635251 IL1RAPL2Q9NP60 686 aa13.04□□□□□ -0.32
PSPC1-207ENST00000635251 XRN1Q8IZH2 1706 aaKnown RBP13.03□□□□□ -0.32
PSPC1-207ENST00000635251 USP44Q9H0E7 712 aa13.03□□□□□ -0.32
PSPC1-207ENST00000635251 PHAXQ9H814 394 aaKnown RBP13.03□□□□□ -0.32
PSPC1-207ENST00000635251 BABAM1Q9NWV8 329 aa13.03□□□□□ -0.32
PSPC1-207ENST00000635251 STAP2Q9UGK3 403 aa13.03□□□□□ -0.32
PSPC1-207ENST00000635251 PALD1Q9ULE6 856 aa13.03□□□□□ -0.32
PSPC1-207ENST00000635251 EIF2S2P20042 333 aaKnown RBP13.02□□□□□ -0.32
PSPC1-207ENST00000635251 ANAPC15P60006 121 aa13.02□□□□□ -0.32
PSPC1-207ENST00000635251 NUTM1Q86Y26 1132 aa13.02□□□□□ -0.32
PSPC1-207ENST00000635251 PPP1R9BQ96SB3 815 aa13.02□□□□□ -0.32
PSPC1-207ENST00000635251 RBM27Q9P2N5 1060 aaKnown RBP13.02□□□□□ -0.32
PSPC1-207ENST00000635251 UNC5CLQ8IV45 518 aa13.02□□□□□ -0.33
PSPC1-207ENST00000635251 THEMISQ8N1K5 641 aaPredicted RBP13.02□□□□□ -0.33
PSPC1-207ENST00000635251 GPT2Q8TD30 523 aa13.02□□□□□ -0.33
PSPC1-207ENST00000635251 PXDNLA1KZ92 1463 aa13.02□□□□□ -0.33
PSPC1-207ENST00000635251 SLIT1O75093 1534 aa13.02□□□□□ -0.33
PSPC1-207ENST00000635251 SURF6O75683 361 aaKnown RBP13.01□□□□□ -0.33
PSPC1-207ENST00000635251 CHAMP1Q96JM3 812 aa13.01□□□□□ -0.33
PSPC1-207ENST00000635251 ARHGAP23Q9P227 1491 aa13.01□□□□□ -0.33
PSPC1-207ENST00000635251 AOX1Q06278 1338 aa13.01□□□□□ -0.33
PSPC1-207ENST00000635251 ANKARQ7Z5J8 1434 aa13.01□□□□□ -0.33
PSPC1-207ENST00000635251 ZBTB7CA1YPR0 619 aa13□□□□□ -0.33
PSPC1-207ENST00000635251 RAB11FIP3O75154 756 aa13□□□□□ -0.33
PSPC1-207ENST00000635251 MAP4K4O95819 1239 aaPredicted RBP13□□□□□ -0.33
PSPC1-207ENST00000635251 KCNA6P17658 529 aa13□□□□□ -0.33
PSPC1-207ENST00000635251 PPP1R42Q7Z4L9 355 aa13□□□□□ -0.33
PSPC1-207ENST00000635251 SSH3Q8TE77 659 aa13□□□□□ -0.33
PSPC1-207ENST00000635251 UPF3BQ9BZI7 483 aaKnown RBP13□□□□□ -0.33
PSPC1-207ENST00000635251 NWD1Q149M9 1564 aa13□□□□□ -0.33
PSPC1-207ENST00000635251 PRIM1P49642 420 aaKnown RBP13□□□□□ -0.33
PSPC1-207ENST00000635251 CUL4AQ13619 759 aa13□□□□□ -0.33
PSPC1-207ENST00000635251 RBSNQ9H1K0 784 aa13□□□□□ -0.33
PSPC1-207ENST00000635251 SRGAP3O43295 1099 aa12.99□□□□□ -0.33
PSPC1-207ENST00000635251 BRD1O95696 1058 aa12.99□□□□□ -0.33
PSPC1-207ENST00000635251 MSNP26038 577 aaKnown RBP12.99□□□□□ -0.33
PSPC1-207ENST00000635251 INTS4Q96HW7 963 aaKnown RBP12.99□□□□□ -0.33
PSPC1-207ENST00000635251 MBD3O95983 291 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms