RNA–Protein interactions for RNA: ENST00000634688.1

SMARCA2-225, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-225ENST00000634688 RNF135Q8IUD6 432 aa9.93□□□□□ -0.82
SMARCA2-225ENST00000634688 CALR3Q96L12 384 aaKnown RBP9.93□□□□□ -0.82
SMARCA2-225ENST00000634688 CUL7Q14999 1698 aa9.93□□□□□ -0.82
SMARCA2-225ENST00000634688 ZIC2O95409 532 aaPredicted RBP9.92□□□□□ -0.82
SMARCA2-225ENST00000634688 ILDR2Q71H61 639 aa9.92□□□□□ -0.82
SMARCA2-225ENST00000634688 ITPKCQ96DU7 683 aa9.92□□□□□ -0.82
SMARCA2-225ENST00000634688 ZFAND3Q9H8U3 227 aa9.92□□□□□ -0.82
SMARCA2-225ENST00000634688 DHX9Q08211 1270 aaKnown RBP9.91□□□□□ -0.82
SMARCA2-225ENST00000634688 ADAMTS8Q9UP79 889 aa9.91□□□□□ -0.82
SMARCA2-225ENST00000634688 PCDHB11Q9Y5F2 797 aa9.91□□□□□ -0.82
SMARCA2-225ENST00000634688 DISP3Q9P2K9 1392 aa9.9□□□□□ -0.82
SMARCA2-225ENST00000634688 KIF21BO75037 1637 aa9.9□□□□□ -0.82
SMARCA2-225ENST00000634688 TSGA10IPQ3SY00 556 aa9.9□□□□□ -0.82
SMARCA2-225ENST00000634688 RNF20Q5VTR2 975 aa9.9□□□□□ -0.82
SMARCA2-225ENST00000634688 ERICH6Q7L0X2 663 aa9.9□□□□□ -0.82
SMARCA2-225ENST00000634688 SEPT12Q8IYM1 358 aa9.9□□□□□ -0.82
SMARCA2-225ENST00000634688 CCDC85AQ96PX6 553 aaPredicted RBP9.9□□□□□ -0.82
SMARCA2-225ENST00000634688 CYLDQ9NQC7 956 aa9.9□□□□□ -0.82
SMARCA2-225ENST00000634688 EMILIN1Q9Y6C2 1016 aa9.9□□□□□ -0.82
SMARCA2-225ENST00000634688 TEX14Q8IWB6 1497 aa9.9□□□□□ -0.83
SMARCA2-225ENST00000634688 WRNQ14191 1432 aaPredicted RBP eCLIP9.9□□□□□ -0.83
SMARCA2-225ENST00000634688 ASXL2Q76L83 1435 aa9.9□□□□□ -0.83
SMARCA2-225ENST00000634688 BIVM-ERCC5R4GMW8 1640 aa9.89□□□□□ -0.83
SMARCA2-225ENST00000634688 KRT76Q01546 638 aa9.89□□□□□ -0.83
SMARCA2-225ENST00000634688 ZNF784Q8NCA9 323 aaPredicted RBP9.89□□□□□ -0.83
SMARCA2-225ENST00000634688 PGPEP1Q9NXJ5 209 aa9.89□□□□□ -0.83
SMARCA2-225ENST00000634688 PLB1Q6P1J6 1458 aa9.89□□□□□ -0.83
SMARCA2-225ENST00000634688 ABCC2Q92887 1545 aa9.88□□□□□ -0.83
SMARCA2-225ENST00000634688 SKIP12755 728 aa9.88□□□□□ -0.83
SMARCA2-225ENST00000634688 CBLBQ13191 982 aa9.88□□□□□ -0.83
SMARCA2-225ENST00000634688 C6orf118Q5T5N4 469 aa9.88□□□□□ -0.83
SMARCA2-225ENST00000634688 UCN2Q96RP3 112 aa9.88□□□□□ -0.83
SMARCA2-225ENST00000634688 DOLKQ9UPQ8 538 aa9.88□□□□□ -0.83
SMARCA2-225ENST00000634688 SPATA31D1Q6ZQQ2 1576 aa9.88□□□□□ -0.83
SMARCA2-225ENST00000634688 SUPT5HO00267 1087 aaKnown RBP9.87□□□□□ -0.83
SMARCA2-225ENST00000634688 OXLD1Q5BKU9 147 aa9.87□□□□□ -0.83
SMARCA2-225ENST00000634688 PHTF2Q8N3S3 785 aa9.87□□□□□ -0.83
SMARCA2-225ENST00000634688 CDCA7Q9BWT1 371 aaPredicted RBP9.87□□□□□ -0.83
SMARCA2-225ENST00000634688 IGHA1P01876 353 aa9.86□□□□□ -0.83
SMARCA2-225ENST00000634688 PLPP7Q8NBV4 271 aa9.86□□□□□ -0.83
SMARCA2-225ENST00000634688 CNTNAP3BQ96NU0 1288 aa9.86□□□□□ -0.83
SMARCA2-225ENST00000634688 CNTNAP3Q9BZ76 1288 aa9.86□□□□□ -0.83
SMARCA2-225ENST00000634688 DNMT3AQ9Y6K1 912 aaPredicted RBP9.86□□□□□ -0.83
SMARCA2-225ENST00000634688 PCF11O94913 1555 aaKnown RBP9.85□□□□□ -0.83
SMARCA2-225ENST00000634688 SCTRP47872 440 aa9.85□□□□□ -0.83
SMARCA2-225ENST00000634688 GPAT2Q6NUI2 795 aa9.85□□□□□ -0.83
SMARCA2-225ENST00000634688 TBC1D9Q6ZT07 1266 aa9.85□□□□□ -0.83
SMARCA2-225ENST00000634688 DEPDC4Q8N2C3 294 aa9.85□□□□□ -0.83
SMARCA2-225ENST00000634688 EPRSP07814 1512 aaKnown RBP9.84□□□□□ -0.83
SMARCA2-225ENST00000634688 GPR161Q8N6U8 529 aaKnown RBP9.84□□□□□ -0.83
SMARCA2-225ENST00000634688 KIAA0586Q9BVV6 1533 aa9.82□□□□□ -0.84
SMARCA2-225ENST00000634688 LILRA1O75019 489 aa9.82□□□□□ -0.84
SMARCA2-225ENST00000634688 BMP2P12643 396 aa9.82□□□□□ -0.84
SMARCA2-225ENST00000634688 ADD1P35611 737 aaKnown RBP9.82□□□□□ -0.84
SMARCA2-225ENST00000634688 CC2D2BQ6DHV5 1058 aa9.82□□□□□ -0.84
SMARCA2-225ENST00000634688 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
SMARCA2-225ENST00000634688 AGBL1Q96MI9 1066 aa9.82□□□□□ -0.84
SMARCA2-225ENST00000634688 ESF1Q9H501 851 aaKnown RBP9.82□□□□□ -0.84
SMARCA2-225ENST00000634688 TFIP11Q9UBB9 837 aaKnown RBP9.82□□□□□ -0.84
SMARCA2-225ENST00000634688 DNMT3LQ9UJW3 386 aa9.82□□□□□ -0.84
SMARCA2-225ENST00000634688 ADAMTSL3P82987 1691 aa9.82□□□□□ -0.84
SMARCA2-225ENST00000634688 PTPRGP23470 1445 aa9.82□□□□□ -0.84
SMARCA2-225ENST00000634688 SOS2Q07890 1332 aaPredicted RBP9.82□□□□□ -0.84
SMARCA2-225ENST00000634688 PTPRMP28827 1452 aa9.81□□□□□ -0.84
SMARCA2-225ENST00000634688 USP17L5A8MUK1 530 aa9.81□□□□□ -0.84
SMARCA2-225ENST00000634688 UPP2O95045 317 aa9.81□□□□□ -0.84
SMARCA2-225ENST00000634688 NCOA4Q13772 614 aa9.81□□□□□ -0.84
SMARCA2-225ENST00000634688 ZNF385CQ66K41 422 aaPredicted RBP9.81□□□□□ -0.84
SMARCA2-225ENST00000634688 C1orf115Q9H7X2 142 aa9.81□□□□□ -0.84
SMARCA2-225ENST00000634688 PALM3A6NDB9 673 aaPredicted RBP9.8□□□□□ -0.84
SMARCA2-225ENST00000634688 ATP9BO43861 1147 aa9.8□□□□□ -0.84
SMARCA2-225ENST00000634688 MYCP01106 439 aaPredicted RBP9.8□□□□□ -0.84
SMARCA2-225ENST00000634688 ERVK-9P63128 1117 aa9.8□□□□□ -0.84
SMARCA2-225ENST00000634688 RELBQ01201 579 aa9.8□□□□□ -0.84
SMARCA2-225ENST00000634688 MAP7D1Q3KQU3 841 aa9.8□□□□□ -0.84
SMARCA2-225ENST00000634688 MEIOBQ8N635 442 aa9.8□□□□□ -0.84
SMARCA2-225ENST00000634688 ZCCHC11Q5TAX3 1644 aaKnown RBP9.8□□□□□ -0.84
SMARCA2-225ENST00000634688 UHRF1BP1LA0JNW5 1464 aa9.79□□□□□ -0.84
SMARCA2-225ENST00000634688 IRS1P35568 1242 aa9.79□□□□□ -0.84
SMARCA2-225ENST00000634688 FOXK2Q01167 660 aa9.79□□□□□ -0.84
SMARCA2-225ENST00000634688 XP32Q5T750 250 aa9.79□□□□□ -0.84
SMARCA2-225ENST00000634688 CCDC125Q86Z20 511 aa9.79□□□□□ -0.84
SMARCA2-225ENST00000634688 SVOPQ8N4V2 548 aa9.79□□□□□ -0.84
SMARCA2-225ENST00000634688 COL25A1Q9BXS0 654 aaPredicted RBP9.79□□□□□ -0.84
SMARCA2-225ENST00000634688 PPP1R12CQ9BZL4 782 aa9.79□□□□□ -0.84
SMARCA2-225ENST00000634688 CHIC2Q9UKJ5 165 aa9.79□□□□□ -0.84
SMARCA2-225ENST00000634688 TTBK1Q5TCY1 1321 aaPredicted RBP9.79□□□□□ -0.84
SMARCA2-225ENST00000634688 CFAP43Q8NDM7 1665 aa9.78□□□□□ -0.84
SMARCA2-225ENST00000634688 USP17L3A6NCW0 530 aa9.78□□□□□ -0.84
SMARCA2-225ENST00000634688 USP17L4A6NCW7 530 aa9.78□□□□□ -0.84
SMARCA2-225ENST00000634688 RFX1P22670 979 aa9.78□□□□□ -0.84
SMARCA2-225ENST00000634688 EML3Q32P44 896 aa9.78□□□□□ -0.84
SMARCA2-225ENST00000634688 USP17L2Q6R6M4 530 aa9.78□□□□□ -0.84
SMARCA2-225ENST00000634688 USP17L1Q7RTZ2 530 aa9.78□□□□□ -0.84
SMARCA2-225ENST00000634688 CCDC82Q8N4S0 544 aa9.78□□□□□ -0.84
SMARCA2-225ENST00000634688 NFATC2IPQ8NCF5 419 aa9.78□□□□□ -0.84
SMARCA2-225ENST00000634688 CCDC97Q96F63 343 aaPredicted RBP9.78□□□□□ -0.84
SMARCA2-225ENST00000634688 ADH1AP07327 375 aa9.77□□□□□ -0.85
SMARCA2-225ENST00000634688 LMOD1P29536 600 aaPredicted RBP9.77□□□□□ -0.85
SMARCA2-225ENST00000634688 USP4Q13107 963 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms