RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-223	ENST00000634435	TMEM94	Q12767	1356 aa		10.04	□□□□□ -0.8
SMARCA2-223	ENST00000634435	PATL2	C9JE40	543 aa	Known RBP	10.04	□□□□□ -0.8
SMARCA2-223	ENST00000634435	PER1	O15534	1290 aa	Predicted RBP	10.04	□□□□□ -0.8
SMARCA2-223	ENST00000634435	SLC27A5	Q9Y2P5	690 aa		10.04	□□□□□ -0.8
SMARCA2-223	ENST00000634435	FAM135B	Q49AJ0	1406 aa		10.04	□□□□□ -0.8
SMARCA2-223	ENST00000634435	KANK1	Q14678	1352 aa		10.03	□□□□□ -0.8
SMARCA2-223	ENST00000634435	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.03	□□□□□ -0.8
SMARCA2-223	ENST00000634435	PALM3	A6NDB9	673 aa	Predicted RBP	10.03	□□□□□ -0.8
SMARCA2-223	ENST00000634435	RFX1	P22670	979 aa		10.03	□□□□□ -0.8
SMARCA2-223	ENST00000634435	KANK4	Q5T7N3	995 aa	Predicted RBP	10.03	□□□□□ -0.8
SMARCA2-223	ENST00000634435	LYPD8	Q6UX82	237 aa		10.03	□□□□□ -0.8
SMARCA2-223	ENST00000634435	EFCAB6	Q5THR3	1501 aa		10.02	□□□□□ -0.8
SMARCA2-223	ENST00000634435	HR	O43593	1189 aa		10.02	□□□□□ -0.81
SMARCA2-223	ENST00000634435	CSB-PGBD3	P0DP91	1061 aa		10.02	□□□□□ -0.81
SMARCA2-223	ENST00000634435	SEMA3F	Q13275	785 aa		10.02	□□□□□ -0.81
SMARCA2-223	ENST00000634435	NPM2	Q86SE8	214 aa	Known RBP	10.02	□□□□□ -0.81
SMARCA2-223	ENST00000634435	RRP7BP	Q9NSQ0	103 aa		10.02	□□□□□ -0.81
SMARCA2-223	ENST00000634435	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.02	□□□□□ -0.81
SMARCA2-223	ENST00000634435	SALL2	Q9Y467	1007 aa	Predicted RBP	10.02	□□□□□ -0.81
SMARCA2-223	ENST00000634435	PIK3C2B	O00750	1634 aa		10.01	□□□□□ -0.81
SMARCA2-223	ENST00000634435	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
SMARCA2-223	ENST00000634435	PUS10	Q3MIT2	529 aa	Known RBP	10.01	□□□□□ -0.81
SMARCA2-223	ENST00000634435	UCN2	Q96RP3	112 aa		10.01	□□□□□ -0.81
SMARCA2-223	ENST00000634435	MAP3K1	Q13233	1512 aa		10.01	□□□□□ -0.81
SMARCA2-223	ENST00000634435	ABCC5	O15440	1437 aa		10	□□□□□ -0.81
SMARCA2-223	ENST00000634435	KCNA6	P17658	529 aa		10	□□□□□ -0.81
SMARCA2-223	ENST00000634435	POTEA	Q6S8J7	498 aa		10	□□□□□ -0.81
SMARCA2-223	ENST00000634435	KCTD12	Q96CX2	325 aa	Known RBP	10	□□□□□ -0.81
SMARCA2-223	ENST00000634435	SLC26A8	Q96RN1	970 aa		10	□□□□□ -0.81
SMARCA2-223	ENST00000634435	DAPK1	P53355	1430 aa		9.99	□□□□□ -0.81
SMARCA2-223	ENST00000634435	NKTR	P30414	1462 aa	Known RBP	9.99	□□□□□ -0.81
SMARCA2-223	ENST00000634435	LMOD1	P29536	600 aa	Predicted RBP	9.99	□□□□□ -0.81
SMARCA2-223	ENST00000634435	USB1	Q9BQ65	265 aa	Known RBP	9.99	□□□□□ -0.81
SMARCA2-223	ENST00000634435	TFIP11	Q9UBB9	837 aa	Known RBP	9.99	□□□□□ -0.81
SMARCA2-223	ENST00000634435	MSH6	P52701	1360 aa		9.99	□□□□□ -0.81
SMARCA2-223	ENST00000634435	BRD1	O95696	1058 aa		9.98	□□□□□ -0.81
SMARCA2-223	ENST00000634435	NR1H3	Q13133	447 aa		9.98	□□□□□ -0.81
SMARCA2-223	ENST00000634435	IDI1	Q13907	227 aa		9.98	□□□□□ -0.81
SMARCA2-223	ENST00000634435	STAC3	Q96MF2	364 aa		9.98	□□□□□ -0.81
SMARCA2-223	ENST00000634435	CROCC2	H7BZ55	1655 aa		9.98	□□□□□ -0.81
SMARCA2-223	ENST00000634435	ROBO1	Q9Y6N7	1651 aa		9.98	□□□□□ -0.81
SMARCA2-223	ENST00000634435	ZC3H4	Q9UPT8	1303 aa	Known RBP	9.98	□□□□□ -0.81
SMARCA2-223	ENST00000634435	CFAP65	Q6ZU64	1925 aa	Known RBP	9.97	□□□□□ -0.81
SMARCA2-223	ENST00000634435	ADGRB3	O60242	1522 aa		9.97	□□□□□ -0.81
SMARCA2-223	ENST00000634435	LMTK2	Q8IWU2	1503 aa		9.97	□□□□□ -0.81
SMARCA2-223	ENST00000634435	KCNA1	Q09470	495 aa		9.97	□□□□□ -0.81
SMARCA2-223	ENST00000634435	BRICD5	Q6PL45	260 aa		9.97	□□□□□ -0.81
SMARCA2-223	ENST00000634435	RNF19B	Q6ZMZ0	732 aa		9.97	□□□□□ -0.81
SMARCA2-223	ENST00000634435	MAFB	Q9Y5Q3	323 aa	Predicted RBP	9.97	□□□□□ -0.81
SMARCA2-223	ENST00000634435	XIRP1	Q702N8	1843 aa	Known RBP	9.97	□□□□□ -0.81
SMARCA2-223	ENST00000634435	ANKRD30A	Q9BXX3	1397 aa		9.97	□□□□□ -0.81
SMARCA2-223	ENST00000634435	NWD1	Q149M9	1564 aa		9.97	□□□□□ -0.81
SMARCA2-223	ENST00000634435	PTPN23	Q9H3S7	1636 aa		9.96	□□□□□ -0.81
SMARCA2-223	ENST00000634435	ATG7	O95352	703 aa		9.96	□□□□□ -0.82
SMARCA2-223	ENST00000634435	BLOC1S3	Q6QNY0	202 aa		9.96	□□□□□ -0.82
SMARCA2-223	ENST00000634435	ANKK1	Q8NFD2	765 aa		9.96	□□□□□ -0.82
SMARCA2-223	ENST00000634435	CHIC2	Q9UKJ5	165 aa		9.96	□□□□□ -0.82
SMARCA2-223	ENST00000634435	NOS1	P29475	1434 aa		9.96	□□□□□ -0.82
SMARCA2-223	ENST00000634435	FGD6	Q6ZV73	1430 aa		9.96	□□□□□ -0.82
SMARCA2-223	ENST00000634435	ZBBX	A8MT70	800 aa		9.95	□□□□□ -0.82
SMARCA2-223	ENST00000634435	FKBPL	Q9UIM3	349 aa		9.95	□□□□□ -0.82
SMARCA2-223	ENST00000634435	JCAD	Q9P266	1359 aa		9.95	□□□□□ -0.82
SMARCA2-223	ENST00000634435	TET3	O43151	1660 aa		9.95	□□□□□ -0.82
SMARCA2-223	ENST00000634435	KDM5A	P29375	1690 aa	Known RBP	9.95	□□□□□ -0.82
SMARCA2-223	ENST00000634435	ATP9B	O43861	1147 aa		9.94	□□□□□ -0.82
SMARCA2-223	ENST00000634435	NR1I2	O75469	434 aa		9.94	□□□□□ -0.82
SMARCA2-223	ENST00000634435	FMNL1	O95466	1100 aa	Predicted RBP	9.94	□□□□□ -0.82
SMARCA2-223	ENST00000634435	F12	P00748	615 aa	Predicted RBP	9.94	□□□□□ -0.82
SMARCA2-223	ENST00000634435	PPP4C	P60510	307 aa		9.94	□□□□□ -0.82
SMARCA2-223	ENST00000634435	PTPRN	Q16849	979 aa		9.94	□□□□□ -0.82
SMARCA2-223	ENST00000634435	TMCO4	Q5TGY1	634 aa		9.94	□□□□□ -0.82
SMARCA2-223	ENST00000634435	SLC52A1	Q9NWF4	448 aa		9.94	□□□□□ -0.82
SMARCA2-223	ENST00000634435	SLAIN2	Q9P270	581 aa		9.94	□□□□□ -0.82
SMARCA2-223	ENST00000634435	PLEKHG1	Q9ULL1	1385 aa		9.93	□□□□□ -0.82
SMARCA2-223	ENST00000634435	LOC105371045	A0A1W2PR82	267 aa		9.93	□□□□□ -0.82
SMARCA2-223	ENST00000634435	SOWAHB	A6NEL2	793 aa		9.93	□□□□□ -0.82
SMARCA2-223	ENST00000634435	FBXO45	P0C2W1	286 aa		9.93	□□□□□ -0.82
SMARCA2-223	ENST00000634435	JUND	P17535	347 aa		9.93	□□□□□ -0.82
SMARCA2-223	ENST00000634435	TBC1D9	Q6ZT07	1266 aa		9.93	□□□□□ -0.82
SMARCA2-223	ENST00000634435	NFATC2IP	Q8NCF5	419 aa		9.93	□□□□□ -0.82
SMARCA2-223	ENST00000634435	THAP11	Q96EK4	314 aa		9.93	□□□□□ -0.82
SMARCA2-223	ENST00000634435	GZF1	Q9H116	711 aa	Predicted RBP	9.93	□□□□□ -0.82
SMARCA2-223	ENST00000634435	MEX3C	Q5U5Q3	659 aa	Known RBP	9.92	□□□□□ -0.82
SMARCA2-223	ENST00000634435	SCUBE3	Q8IX30	993 aa		9.92	□□□□□ -0.82
SMARCA2-223	ENST00000634435	TSR3	Q9UJK0	312 aa	Known RBP	9.92	□□□□□ -0.82
SMARCA2-223	ENST00000634435	HPS5	Q9UPZ3	1129 aa		9.92	□□□□□ -0.82
SMARCA2-223	ENST00000634435	PCDHB3	Q9Y5E6	796 aa		9.92	□□□□□ -0.82
SMARCA2-223	ENST00000634435	RPRD2	Q5VT52	1461 aa	Known RBP	9.91	□□□□□ -0.82
SMARCA2-223	ENST00000634435	ZFYVE9	O95405	1425 aa		9.91	□□□□□ -0.82
SMARCA2-223	ENST00000634435	RIMS2	Q9UQ26	1411 aa		9.91	□□□□□ -0.82
SMARCA2-223	ENST00000634435	SETD1A	O15047	1707 aa	Known RBP	9.91	□□□□□ -0.82
SMARCA2-223	ENST00000634435	PHLPP1	O60346	1717 aa		9.91	□□□□□ -0.82
SMARCA2-223	ENST00000634435	GOLGA8CP	A6NN73	597 aa		9.91	□□□□□ -0.82
SMARCA2-223	ENST00000634435	APLP1	P51693	650 aa		9.91	□□□□□ -0.82
SMARCA2-223	ENST00000634435	ZNF592	Q92610	1267 aa		9.91	□□□□□ -0.82
SMARCA2-223	ENST00000634435	ANKRD50	Q9ULJ7	1429 aa		9.9	□□□□□ -0.82
SMARCA2-223	ENST00000634435	RGS20	O76081	388 aa		9.9	□□□□□ -0.82
SMARCA2-223	ENST00000634435	ADGRL2	O95490	1459 aa		9.9	□□□□□ -0.83
SMARCA2-223	ENST00000634435	LRP6	O75581	1613 aa		9.89	□□□□□ -0.83
SMARCA2-223	ENST00000634435	COL16A1	Q07092	1604 aa	Predicted RBP	9.89	□□□□□ -0.83

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