RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 RHBDD1Q8TEB9 315 aa6.85□□□□□ -1.31
SRP54-214ENST00000630962 SLC4A9Q96Q91 983 aa6.85□□□□□ -1.31
SRP54-214ENST00000630962 ETNK1Q9HBU6 452 aa6.85□□□□□ -1.31
SRP54-214ENST00000630962 PCDHGA11Q9Y5H2 935 aa6.85□□□□□ -1.31
SRP54-214ENST00000630962 HRH3Q9Y5N1 445 aa6.85□□□□□ -1.31
SRP54-214ENST00000630962 A0A1B0GTH6 734 aa6.84□□□□□ -1.31
SRP54-214ENST00000630962 SMTNP53814 917 aa6.84□□□□□ -1.31
SRP54-214ENST00000630962 LCE2AQ5TA79 106 aaPredicted RBP6.84□□□□□ -1.31
SRP54-214ENST00000630962 SV2AQ7L0J3 742 aa6.84□□□□□ -1.31
SRP54-214ENST00000630962 C1orf216Q8TAB5 229 aa6.84□□□□□ -1.31
SRP54-214ENST00000630962 UCN2Q96RP3 112 aa6.84□□□□□ -1.31
SRP54-214ENST00000630962 PPP1R12CQ9BZL4 782 aa6.84□□□□□ -1.31
SRP54-214ENST00000630962 FHDC1Q9C0D6 1143 aaPredicted RBP6.84□□□□□ -1.31
SRP54-214ENST00000630962 TIMMDC1Q9NPL8 285 aa6.84□□□□□ -1.31
SRP54-214ENST00000630962 TFIP11Q9UBB9 837 aaKnown RBP6.84□□□□□ -1.31
SRP54-214ENST00000630962 M0R2N6 131 aa6.83□□□□□ -1.32
SRP54-214ENST00000630962 CDK2AP1O14519 115 aa6.83□□□□□ -1.32
SRP54-214ENST00000630962 SCNN1DP51172 638 aa6.83□□□□□ -1.32
SRP54-214ENST00000630962 POU4F2Q12837 409 aa6.83□□□□□ -1.32
SRP54-214ENST00000630962 LBRQ14739 615 aaKnown RBP6.83□□□□□ -1.32
SRP54-214ENST00000630962 NIFKQ9BYG3 293 aaKnown RBP6.83□□□□□ -1.32
SRP54-214ENST00000630962 DNAAF2Q9NVR5 837 aaKnown RBP6.83□□□□□ -1.32
SRP54-214ENST00000630962 MKRN1Q9UHC7 482 aaKnown RBP6.83□□□□□ -1.32
SRP54-214ENST00000630962 MAFBQ9Y5Q3 323 aaPredicted RBP6.83□□□□□ -1.32
SRP54-214ENST00000630962 F11P03951 625 aa6.82□□□□□ -1.32
SRP54-214ENST00000630962 MTFR1Q15390 333 aa6.82□□□□□ -1.32
SRP54-214ENST00000630962 LARP1Q6PKG0 1096 aaKnown RBP6.82□□□□□ -1.32
SRP54-214ENST00000630962 TRIM22Q8IYM9 498 aa6.82□□□□□ -1.32
SRP54-214ENST00000630962 DEPDC4Q8N2C3 294 aa6.82□□□□□ -1.32
SRP54-214ENST00000630962 SENP3-EIF4A1A0A087X0R7 540 aa6.81□□□□□ -1.32
SRP54-214ENST00000630962 FAM181BA6NEQ2 426 aa6.81□□□□□ -1.32
SRP54-214ENST00000630962 A6NJY4 79 aa6.81□□□□□ -1.32
SRP54-214ENST00000630962 TMEM229AB2RXF0 380 aa6.81□□□□□ -1.32
SRP54-214ENST00000630962 CSB-PGBD3P0DP91 1061 aa6.81□□□□□ -1.32
SRP54-214ENST00000630962 SIX5Q8N196 739 aa6.81□□□□□ -1.32
SRP54-214ENST00000630962 PGBD3Q8N328 593 aa6.81□□□□□ -1.32
SRP54-214ENST00000630962 OGFOD1Q8N543 542 aa6.81□□□□□ -1.32
SRP54-214ENST00000630962 VRTNQ9H8Y1 702 aa6.81□□□□□ -1.32
SRP54-214ENST00000630962 ZNF777Q9ULD5 760 aaPredicted RBP6.81□□□□□ -1.32
SRP54-214ENST00000630962 CHMP3Q9Y3E7 222 aa6.81□□□□□ -1.32
SRP54-214ENST00000630962 RHOQP17081 205 aa6.8□□□□□ -1.32
SRP54-214ENST00000630962 VEGFBP49765 207 aa6.8□□□□□ -1.32
SRP54-214ENST00000630962 NBPF1Q3BBV0 1214 aa6.8□□□□□ -1.32
SRP54-214ENST00000630962 CCDC102BQ68D86 513 aa6.8□□□□□ -1.32
SRP54-214ENST00000630962 TRERF1Q96PN7 1200 aa6.8□□□□□ -1.32
SRP54-214ENST00000630962 CDC14CA4D256 554 aa6.79□□□□□ -1.32
SRP54-214ENST00000630962 RASA1P20936 1047 aa6.79□□□□□ -1.32
SRP54-214ENST00000630962 RIPOR1Q6ZS17 1223 aa6.79□□□□□ -1.32
SRP54-214ENST00000630962 TPCN2Q8NHX9 752 aa6.79□□□□□ -1.32
SRP54-214ENST00000630962 GAS2L2Q8NHY3 880 aa6.79□□□□□ -1.32
SRP54-214ENST00000630962 GAS2L1Q99501 681 aaPredicted RBP6.79□□□□□ -1.32
SRP54-214ENST00000630962 SERPINA10Q9UK55 444 aa6.79□□□□□ -1.32
SRP54-214ENST00000630962 PHF24Q9UPV7 400 aa6.79□□□□□ -1.32
SRP54-214ENST00000630962 FAM196BA6NMK8 535 aa6.78□□□□□ -1.32
SRP54-214ENST00000630962 TATP17735 454 aaPredicted RBP6.78□□□□□ -1.32
SRP54-214ENST00000630962 LMOD1P29536 600 aaPredicted RBP6.78□□□□□ -1.32
SRP54-214ENST00000630962 GMPRP36959 345 aa6.78□□□□□ -1.32
SRP54-214ENST00000630962 C4orf17Q53FE4 359 aa6.78□□□□□ -1.32
SRP54-214ENST00000630962 EFHC2Q5JST6 749 aa6.78□□□□□ -1.32
SRP54-214ENST00000630962 CCDC97Q96F63 343 aaPredicted RBP6.78□□□□□ -1.32
SRP54-214ENST00000630962 ZNF358Q9NW07 568 aa6.78□□□□□ -1.32
SRP54-214ENST00000630962 ZDHHC3Q9NYG2 299 aa6.78□□□□□ -1.32
SRP54-214ENST00000630962 SCHIP1Q9P0W5 487 aaPredicted RBP6.78□□□□□ -1.32
SRP54-214ENST00000630962 SERTAD1Q9UHV2 236 aa6.78□□□□□ -1.32
SRP54-214ENST00000630962 NSFL1CQ9UNZ2 370 aaKnown RBP6.78□□□□□ -1.32
SRP54-214ENST00000630962 GPC6Q9Y625 555 aaPredicted RBP6.78□□□□□ -1.32
SRP54-214ENST00000630962 ERBB4Q15303 1308 aa6.77□□□□□ -1.32
SRP54-214ENST00000630962 ZBTB7BO15156 539 aaPredicted RBP6.77□□□□□ -1.33
SRP54-214ENST00000630962 SEC13P55735 322 aa6.77□□□□□ -1.33
SRP54-214ENST00000630962 FIGNL1Q6PIW4 674 aa6.77□□□□□ -1.33
SRP54-214ENST00000630962 C14orf37Q86TY3 774 aa6.77□□□□□ -1.33
SRP54-214ENST00000630962 VWA5B2Q8N398 1253 aa6.77□□□□□ -1.33
SRP54-214ENST00000630962 CLDN10P78369 228 aa6.76□□□□□ -1.33
SRP54-214ENST00000630962 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.76□□□□□ -1.33
SRP54-214ENST00000630962 NUCKS1Q9H1E3 243 aaKnown RBP6.76□□□□□ -1.33
SRP54-214ENST00000630962 CRISPLD1Q9H336 500 aa6.76□□□□□ -1.33
SRP54-214ENST00000630962 CABP1Q9NZU7 370 aa6.76□□□□□ -1.33
SRP54-214ENST00000630962 STK17AQ9UEE5 414 aa6.76□□□□□ -1.33
SRP54-214ENST00000630962 PHKA2P46019 1235 aa6.75□□□□□ -1.33
SRP54-214ENST00000630962 PSMA6P60900 246 aaKnown RBP6.75□□□□□ -1.33
SRP54-214ENST00000630962 TEAD4Q15561 434 aa6.75□□□□□ -1.33
SRP54-214ENST00000630962 NLRP8Q86W28 1048 aa6.75□□□□□ -1.33
SRP54-214ENST00000630962 ZNF837Q96EG3 531 aaPredicted RBP6.75□□□□□ -1.33
SRP54-214ENST00000630962 CFHR5Q9BXR6 569 aa6.75□□□□□ -1.33
SRP54-214ENST00000630962 IQSEC3Q9UPP2 1182 aaPredicted RBP6.75□□□□□ -1.33
SRP54-214ENST00000630962 RFX1P22670 979 aa6.74□□□□□ -1.33
SRP54-214ENST00000630962 MSX1P28360 303 aa6.74□□□□□ -1.33
SRP54-214ENST00000630962 PLA2G4AP47712 749 aa6.74□□□□□ -1.33
SRP54-214ENST00000630962 FOXK2Q01167 660 aa6.74□□□□□ -1.33
SRP54-214ENST00000630962 KANK4Q5T7N3 995 aaPredicted RBP6.74□□□□□ -1.33
SRP54-214ENST00000630962 STAG2Q8N3U4 1231 aa6.74□□□□□ -1.33
SRP54-214ENST00000630962 ZSCAN1Q8NBB4 408 aa6.74□□□□□ -1.33
SRP54-214ENST00000630962 AIDAQ96BJ3 306 aa6.74□□□□□ -1.33
SRP54-214ENST00000630962 ZNF594Q96JF6 807 aaPredicted RBP6.74□□□□□ -1.33
SRP54-214ENST00000630962 SERTM1A2A2V5 107 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 USP17L15C9J2P7 530 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 USP17L10C9JJH3 530 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 USP17L13C9JLJ4 530 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 USP17L12C9JPN9 530 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 USP17L11C9JVI0 530 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms