RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 ATP6V1AP38606 617 aa27.58■■■□□ 2.01
CIRBP-246ENST00000628979 GAS2L2Q8NHY3 880 aa27.58■■■□□ 2.01
CIRBP-246ENST00000628979 TAF1LQ8IZX4 1826 aa27.57■■■□□ 2
CIRBP-246ENST00000628979 VIRMAQ69YN4 1812 aaKnown RBP27.57■■■□□ 2
CIRBP-246ENST00000628979 TUBGCP6Q96RT7 1819 aa27.56■■■□□ 2
CIRBP-246ENST00000628979 MSH5O43196 834 aa27.56■■■□□ 2
CIRBP-246ENST00000628979 PPP1R1BQ9UD71 204 aaPredicted RBP27.56■■■□□ 2
CIRBP-246ENST00000628979 PNPLA7Q6ZV29 1317 aa27.56■■■□□ 2
CIRBP-246ENST00000628979 ZNF316A6NFI3 1004 aaPredicted RBP27.55■■■□□ 2
CIRBP-246ENST00000628979 FCHSD2O94868 740 aa27.55■■■□□ 2
CIRBP-246ENST00000628979 HMGB2P26583 209 aaKnown RBP27.55■■■□□ 2
CIRBP-246ENST00000628979 SLC52A2Q9HAB3 445 aa27.55■■■□□ 2
CIRBP-246ENST00000628979 GNAT3A8MTJ3 354 aa27.54■■■□□ 2
CIRBP-246ENST00000628979 ITPK1Q13572 414 aa27.54■■■□□ 2
CIRBP-246ENST00000628979 AK7Q96M32 723 aa27.54■■■□□ 2
CIRBP-246ENST00000628979 MAP3K5Q99683 1374 aa27.53■■■□□ 2
CIRBP-246ENST00000628979 MYBBP1AQ9BQG0 1328 aaKnown RBP27.53■■■□□ 2
CIRBP-246ENST00000628979 PTCD1O75127 700 aaKnown RBP27.53■■■□□ 2
CIRBP-246ENST00000628979 LINC00116Q8NCU8 138 aa27.53■■■□□ 2
CIRBP-246ENST00000628979 MTFR1LQ9H019 292 aa27.53■■■□□ 2
CIRBP-246ENST00000628979 C4BP0C0L5 1744 aa27.52■■■□□ 2
CIRBP-246ENST00000628979 QSER1Q2KHR3 1735 aa27.52■■■□□ 2
CIRBP-246ENST00000628979 SLC4A9Q96Q91 983 aa27.5■■□□□ 1.99
CIRBP-246ENST00000628979 SLC39A6Q13433 755 aa27.49■■□□□ 1.99
CIRBP-246ENST00000628979 COL23A1Q86Y22 540 aaPredicted RBP27.49■■□□□ 1.99
CIRBP-246ENST00000628979 PHF14O94880 888 aa27.48■■□□□ 1.99
CIRBP-246ENST00000628979 NEFMP07197 916 aa27.48■■□□□ 1.99
CIRBP-246ENST00000628979 SMIM5Q71RC9 77 aa27.48■■□□□ 1.99
CIRBP-246ENST00000628979 IL17REQ8NFR9 667 aa27.48■■□□□ 1.99
CIRBP-246ENST00000628979 PTGER2P43116 358 aa27.47■■□□□ 1.99
CIRBP-246ENST00000628979 TEFQ10587 303 aa27.47■■□□□ 1.99
CIRBP-246ENST00000628979 PRKRIP1Q9H875 184 aaPredicted RBP27.47■■□□□ 1.99
CIRBP-246ENST00000628979 SLC16A10Q8TF71 515 aa27.46■■□□□ 1.99
CIRBP-246ENST00000628979 ADAMTS7Q9UKP4 1686 aa27.46■■□□□ 1.99
CIRBP-246ENST00000628979 MRC1P22897 1456 aa27.45■■□□□ 1.99
CIRBP-246ENST00000628979 GNPATO15228 680 aa27.44■■□□□ 1.98
CIRBP-246ENST00000628979 AMIGO3Q86WK7 504 aa27.44■■□□□ 1.98
CIRBP-246ENST00000628979 FLAD1Q8NFF5 587 aa27.44■■□□□ 1.98
CIRBP-246ENST00000628979 RTF1Q92541 710 aaKnown RBP27.44■■□□□ 1.98
CIRBP-246ENST00000628979 PNNQ9H307 717 aaKnown RBP27.42■■□□□ 1.98
CIRBP-246ENST00000628979 UBR3Q6ZT12 1888 aa27.42■■□□□ 1.98
CIRBP-246ENST00000628979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.41■■□□□ 1.98
CIRBP-246ENST00000628979 MSL1Q68DK7 614 aa27.41■■□□□ 1.98
CIRBP-246ENST00000628979 MCM10Q7L590 875 aa27.41■■□□□ 1.98
CIRBP-246ENST00000628979 DCTN1Q14203 1278 aa27.4■■□□□ 1.98
CIRBP-246ENST00000628979 TTC5Q8N0Z6 440 aa27.4■■□□□ 1.98
CIRBP-246ENST00000628979 PLEKHF1Q96S99 279 aa27.4■■□□□ 1.98
CIRBP-246ENST00000628979 SGIP1Q9BQI5 828 aa27.4■■□□□ 1.98
CIRBP-246ENST00000628979 MAPK8IP3Q9UPT6 1336 aa27.4■■□□□ 1.98
CIRBP-246ENST00000628979 ZNF831Q5JPB2 1677 aa27.4■■□□□ 1.98
CIRBP-246ENST00000628979 POLD1P28340 1107 aa27.39■■□□□ 1.98
CIRBP-246ENST00000628979 SSFA2P28290 1259 aa27.38■■□□□ 1.97
CIRBP-246ENST00000628979 ARXQ96QS3 562 aa27.38■■□□□ 1.97
CIRBP-246ENST00000628979 COL5A3P25940 1745 aaPredicted RBP27.38■■□□□ 1.97
CIRBP-246ENST00000628979 WDR43Q15061 677 aaKnown RBP eCLIP27.37■■□□□ 1.97
CIRBP-246ENST00000628979 DNAJC10Q8IXB1 793 aa27.37■■□□□ 1.97
CIRBP-246ENST00000628979 RTCBQ9Y3I0 505 aaKnown RBP27.37■■□□□ 1.97
CIRBP-246ENST00000628979 CEMIPQ8WUJ3 1361 aa27.36■■□□□ 1.97
CIRBP-246ENST00000628979 RC3H1Q5TC82 1133 aaKnown RBP27.36■■□□□ 1.97
CIRBP-246ENST00000628979 TJP1Q07157 1748 aa27.36■■□□□ 1.97
CIRBP-246ENST00000628979 SIPA1L3O60292 1781 aaPredicted RBP27.35■■□□□ 1.97
CIRBP-246ENST00000628979 BTBD11A6QL63 1104 aa27.35■■□□□ 1.97
CIRBP-246ENST00000628979 CRKLP46109 303 aaKnown RBP27.35■■□□□ 1.97
CIRBP-246ENST00000628979 NFE2L2Q16236 605 aa27.35■■□□□ 1.97
CIRBP-246ENST00000628979 KLHL34Q8N239 644 aa27.35■■□□□ 1.97
CIRBP-246ENST00000628979 KCPQ6ZWJ8 1503 aa27.35■■□□□ 1.97
CIRBP-246ENST00000628979 CNTNAP4Q9C0A0 1308 aa27.35■■□□□ 1.97
CIRBP-246ENST00000628979 DLG5Q8TDM6 1919 aa27.34■■□□□ 1.97
CIRBP-246ENST00000628979 HTATSF1O43719 755 aaKnown RBP27.34■■□□□ 1.97
CIRBP-246ENST00000628979 TRAPPC3LQ5T215 181 aa27.34■■□□□ 1.97
CIRBP-246ENST00000628979 ZNF790Q6PG37 636 aa27.34■■□□□ 1.97
CIRBP-246ENST00000628979 CCDC146Q8IYE0 955 aa27.33■■□□□ 1.97
CIRBP-246ENST00000628979 FHDC1Q9C0D6 1143 aaPredicted RBP27.33■■□□□ 1.97
CIRBP-246ENST00000628979 MYH14Q7Z406 1995 aaKnown RBP27.33■■□□□ 1.97
CIRBP-246ENST00000628979 RPS6KA4O75676 772 aa27.32■■□□□ 1.96
CIRBP-246ENST00000628979 KCNQ3O43525 872 aa27.31■■□□□ 1.96
CIRBP-246ENST00000628979 ZNF496Q96IT1 587 aaPredicted RBP27.31■■□□□ 1.96
CIRBP-246ENST00000628979 ARHGEF1Q92888 912 aaKnown RBP27.3■■□□□ 1.96
CIRBP-246ENST00000628979 COL24A1Q17RW2 1714 aa27.3■■□□□ 1.96
CIRBP-246ENST00000628979 UBR2Q8IWV8 1755 aa27.3■■□□□ 1.96
CIRBP-246ENST00000628979 VSIG10Q8N0Z9 540 aa27.29■■□□□ 1.96
CIRBP-246ENST00000628979 ADAMTS8Q9UP79 889 aa27.29■■□□□ 1.96
CIRBP-246ENST00000628979 CYP19A1P11511 503 aaPredicted RBP27.28■■□□□ 1.96
CIRBP-246ENST00000628979 RFC4P35249 363 aa27.28■■□□□ 1.96
CIRBP-246ENST00000628979 INTS5Q6P9B9 1019 aaKnown RBP27.28■■□□□ 1.96
CIRBP-246ENST00000628979 FMNL2Q96PY5 1086 aa27.28■■□□□ 1.96
CIRBP-246ENST00000628979 SYT17Q9BSW7 474 aa27.28■■□□□ 1.96
CIRBP-246ENST00000628979 CCDC87Q9NVE4 849 aa27.28■■□□□ 1.96
CIRBP-246ENST00000628979 RIPK4P57078 832 aa27.27■■□□□ 1.96
CIRBP-246ENST00000628979 THUMPD2Q9BTF0 503 aaKnown RBP27.27■■□□□ 1.96
CIRBP-246ENST00000628979 CICQ96RK0 1608 aaPredicted RBP27.27■■□□□ 1.96
CIRBP-246ENST00000628979 HEG1Q9ULI3 1381 aa27.26■■□□□ 1.95
CIRBP-246ENST00000628979 ANP32CO43423 234 aa27.26■■□□□ 1.95
CIRBP-246ENST00000628979 ADRA2BP18089 450 aa27.26■■□□□ 1.95
CIRBP-246ENST00000628979 TAF7Q15545 349 aaPredicted RBP27.26■■□□□ 1.95
CIRBP-246ENST00000628979 MIS18AQ9NYP9 233 aa27.26■■□□□ 1.95
CIRBP-246ENST00000628979 RRP7AQ9Y3A4 280 aaKnown RBP27.26■■□□□ 1.95
CIRBP-246ENST00000628979 NEUROD2Q15784 382 aa27.25■■□□□ 1.95
CIRBP-246ENST00000628979 STARD3NLO95772 234 aa27.24■■□□□ 1.95
CIRBP-246ENST00000628979 RUNDC1Q96C34 613 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms