RNA–Protein interactions for RNA: ENST00000627441.2

SPTAN1-212, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-212ENST00000627441 TTC21BQ7Z4L5 1316 aa12.11□□□□□ -0.47
SPTAN1-212ENST00000627441 ZC3H4Q9UPT8 1303 aaKnown RBP12.11□□□□□ -0.47
SPTAN1-212ENST00000627441 NSD3Q9BZ95 1437 aa12.11□□□□□ -0.47
SPTAN1-212ENST00000627441 CHRNA5P30532 468 aa12.11□□□□□ -0.47
SPTAN1-212ENST00000627441 DALRD3Q5D0E6 543 aaKnown RBP12.11□□□□□ -0.47
SPTAN1-212ENST00000627441 PIM2Q9P1W9 311 aa12.11□□□□□ -0.47
SPTAN1-212ENST00000627441 WDR33Q9C0J8 1336 aaKnown RBP12.1□□□□□ -0.47
SPTAN1-212ENST00000627441 TMEM88BA6NKF7 163 aa12.09□□□□□ -0.47
SPTAN1-212ENST00000627441 CCDC87Q9NVE4 849 aa12.09□□□□□ -0.47
SPTAN1-212ENST00000627441 KDM2AQ9Y2K7 1162 aa12.09□□□□□ -0.47
SPTAN1-212ENST00000627441 DLEC1Q9Y238 1755 aa12.09□□□□□ -0.47
SPTAN1-212ENST00000627441 GNPATO15228 680 aa12.08□□□□□ -0.48
SPTAN1-212ENST00000627441 MAP2K1Q02750 393 aaPredicted RBP12.08□□□□□ -0.48
SPTAN1-212ENST00000627441 MPHOSPH9Q99550 1183 aa12.08□□□□□ -0.48
SPTAN1-212ENST00000627441 MON2Q7Z3U7 1717 aa12.08□□□□□ -0.48
SPTAN1-212ENST00000627441 ADAMTSL1Q8N6G6 1762 aa12.07□□□□□ -0.48
SPTAN1-212ENST00000627441 RASSF10A6NK89 507 aa12.07□□□□□ -0.48
SPTAN1-212ENST00000627441 DGKZQ13574 1117 aa12.07□□□□□ -0.48
SPTAN1-212ENST00000627441 ITGBL1O95965 494 aaPredicted RBP12.06□□□□□ -0.48
SPTAN1-212ENST00000627441 LMNB1P20700 586 aa12.06□□□□□ -0.48
SPTAN1-212ENST00000627441 ITPK1Q13572 414 aa12.06□□□□□ -0.48
SPTAN1-212ENST00000627441 DEFB115Q30KQ5 88 aa12.06□□□□□ -0.48
SPTAN1-212ENST00000627441 MPRIPQ6WCQ1 1025 aa12.06□□□□□ -0.48
SPTAN1-212ENST00000627441 ZCRB1Q8TBF4 217 aaKnown RBP12.06□□□□□ -0.48
SPTAN1-212ENST00000627441 LTV1Q96GA3 475 aaPredicted RBP12.06□□□□□ -0.48
SPTAN1-212ENST00000627441 SZT2Q5T011 3432 aa12.06□□□□□ -0.48
SPTAN1-212ENST00000627441 DLL1O00548 723 aa12.05□□□□□ -0.48
SPTAN1-212ENST00000627441 HABP4Q5JVS0 413 aaKnown RBP12.05□□□□□ -0.48
SPTAN1-212ENST00000627441 PPARGC1BQ86YN6 1023 aaKnown RBP12.05□□□□□ -0.48
SPTAN1-212ENST00000627441 NFKBIEO00221 500 aa12.04□□□□□ -0.48
SPTAN1-212ENST00000627441 ZNF219Q9P2Y4 722 aaPredicted RBP12.04□□□□□ -0.48
SPTAN1-212ENST00000627441 AFDNP55196 1824 aaKnown RBP12.04□□□□□ -0.48
SPTAN1-212ENST00000627441 ADAMTS7Q9UKP4 1686 aa12.03□□□□□ -0.48
SPTAN1-212ENST00000627441 SCN4AP35499 1836 aa12.03□□□□□ -0.48
SPTAN1-212ENST00000627441 GYS1P13807 737 aa12.03□□□□□ -0.48
SPTAN1-212ENST00000627441 TMF1P82094 1093 aa12.03□□□□□ -0.48
SPTAN1-212ENST00000627441 FER1L6Q2WGJ9 1857 aa12.03□□□□□ -0.48
SPTAN1-212ENST00000627441 MYH14Q7Z406 1995 aaKnown RBP12.03□□□□□ -0.48
SPTAN1-212ENST00000627441 COL5A3P25940 1745 aaPredicted RBP12.03□□□□□ -0.48
SPTAN1-212ENST00000627441 DDNO94850 711 aaPredicted RBP12.02□□□□□ -0.49
SPTAN1-212ENST00000627441 GRM1Q13255 1194 aa12.02□□□□□ -0.49
SPTAN1-212ENST00000627441 PARP3Q9Y6F1 533 aa12.02□□□□□ -0.49
SPTAN1-212ENST00000627441 TTC21AQ8NDW8 1320 aa12.02□□□□□ -0.49
SPTAN1-212ENST00000627441 CUL9Q8IWT3 2517 aa12.01□□□□□ -0.49
SPTAN1-212ENST00000627441 DDR1Q08345 913 aa12.01□□□□□ -0.49
SPTAN1-212ENST00000627441 NLGN1Q8N2Q7 840 aa12.01□□□□□ -0.49
SPTAN1-212ENST00000627441 DCAF11Q8TEB1 546 aa12.01□□□□□ -0.49
SPTAN1-212ENST00000627441 LOC102724428A0A0B4J2F2 783 aa12□□□□□ -0.49
SPTAN1-212ENST00000627441 FXR1P51114 621 aaKnown RBP eCLIP12□□□□□ -0.49
SPTAN1-212ENST00000627441 SIK1P57059 783 aa12□□□□□ -0.49
SPTAN1-212ENST00000627441 CYP4F22Q6NT55 531 aa12□□□□□ -0.49
SPTAN1-212ENST00000627441 LDHDQ86WU2 507 aa12□□□□□ -0.49
SPTAN1-212ENST00000627441 NME9Q86XW9 330 aa12□□□□□ -0.49
SPTAN1-212ENST00000627441 CAPNS2Q96L46 248 aa12□□□□□ -0.49
SPTAN1-212ENST00000627441 AOC2O75106 756 aa11.99□□□□□ -0.49
SPTAN1-212ENST00000627441 FMR1Q06787 632 aaKnown RBP eCLIP11.99□□□□□ -0.49
SPTAN1-212ENST00000627441 DPY19L2Q6NUT2 758 aa11.99□□□□□ -0.49
SPTAN1-212ENST00000627441 USHBP1Q8N6Y0 703 aa11.99□□□□□ -0.49
SPTAN1-212ENST00000627441 PIGBQ92521 554 aa11.99□□□□□ -0.49
SPTAN1-212ENST00000627441 ARHGEF1Q92888 912 aaKnown RBP11.99□□□□□ -0.49
SPTAN1-212ENST00000627441 ABT1Q9ULW3 272 aaKnown RBP11.99□□□□□ -0.49
SPTAN1-212ENST00000627441 USP31Q70CQ4 1352 aa11.99□□□□□ -0.49
SPTAN1-212ENST00000627441 CACNA1SQ13698 1873 aa11.99□□□□□ -0.49
SPTAN1-212ENST00000627441 TRPM7Q96QT4 1865 aa11.98□□□□□ -0.49
SPTAN1-212ENST00000627441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.98□□□□□ -0.49
SPTAN1-212ENST00000627441 BEGAINQ9BUH8 593 aa11.98□□□□□ -0.49
SPTAN1-212ENST00000627441 A0A0C4DFX4 3053 aa11.97□□□□□ -0.49
SPTAN1-212ENST00000627441 TRAPPC3LQ5T215 181 aa11.97□□□□□ -0.49
SPTAN1-212ENST00000627441 PAXIP1Q6ZW49 1069 aaPredicted RBP11.97□□□□□ -0.49
SPTAN1-212ENST00000627441 SMARCC1Q92922 1105 aaPredicted RBP11.97□□□□□ -0.49
SPTAN1-212ENST00000627441 TAF1DQ9H5J8 278 aaPredicted RBP11.97□□□□□ -0.49
SPTAN1-212ENST00000627441 MKI67P46013 3256 aaKnown RBP11.97□□□□□ -0.49
SPTAN1-212ENST00000627441 KTN1Q86UP2 1357 aaKnown RBP11.96□□□□□ -0.49
SPTAN1-212ENST00000627441 NBPF1Q3BBV0 1214 aa11.96□□□□□ -0.49
SPTAN1-212ENST00000627441 MAP1SQ66K74 1059 aaPredicted RBP11.96□□□□□ -0.49
SPTAN1-212ENST00000627441 GPR101Q96P66 508 aaPredicted RBP11.96□□□□□ -0.49
SPTAN1-212ENST00000627441 SRP68Q9UHB9 627 aaKnown RBP11.96□□□□□ -0.49
SPTAN1-212ENST00000627441 NRXN2Q9P2S2 1712 aa11.95□□□□□ -0.5
SPTAN1-212ENST00000627441 CENPJQ9HC77 1338 aaPredicted RBP11.95□□□□□ -0.5
SPTAN1-212ENST00000627441 CYP27B1O15528 508 aa11.95□□□□□ -0.5
SPTAN1-212ENST00000627441 ATP6V1AP38606 617 aa11.95□□□□□ -0.5
SPTAN1-212ENST00000627441 ERFEQ4G0M1 354 aa11.95□□□□□ -0.5
SPTAN1-212ENST00000627441 EAPPQ56P03 285 aaPredicted RBP11.95□□□□□ -0.5
SPTAN1-212ENST00000627441 IP6K1Q92551 441 aa11.95□□□□□ -0.5
SPTAN1-212ENST00000627441 GCC1Q96CN9 775 aa11.95□□□□□ -0.5
SPTAN1-212ENST00000627441 ASAP1Q9ULH1 1129 aa11.95□□□□□ -0.5
SPTAN1-212ENST00000627441 COL11A2P13942 1736 aaPredicted RBP11.94□□□□□ -0.5
SPTAN1-212ENST00000627441 HMGB2P26583 209 aaKnown RBP11.94□□□□□ -0.5
SPTAN1-212ENST00000627441 FKBP8Q14318 412 aa11.94□□□□□ -0.5
SPTAN1-212ENST00000627441 RTCBQ9Y3I0 505 aaKnown RBP11.94□□□□□ -0.5
SPTAN1-212ENST00000627441 KDRP35968 1356 aa11.93□□□□□ -0.5
SPTAN1-212ENST00000627441 ANKRD31Q8N7Z5 1873 aa11.93□□□□□ -0.5
SPTAN1-212ENST00000627441 SCN11AQ9UI33 1791 aa11.93□□□□□ -0.5
SPTAN1-212ENST00000627441 FBLN1P23142 703 aa11.93□□□□□ -0.5
SPTAN1-212ENST00000627441 NBPF6Q5VWK0 638 aa11.93□□□□□ -0.5
SPTAN1-212ENST00000627441 NBPF4Q96M43 638 aa11.93□□□□□ -0.5
SPTAN1-212ENST00000627441 SLC4A9Q96Q91 983 aa11.93□□□□□ -0.5
SPTAN1-212ENST00000627441 CD163L1Q9NR16 1453 aa11.92□□□□□ -0.5
SPTAN1-212ENST00000627441 POLRMTO00411 1230 aaKnown RBP11.92□□□□□ -0.5
SPTAN1-212ENST00000627441 CNTROBQ8N137 903 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms