RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 L3MBTL2Q969R5 705 aa12.24□□□□□ -0.45
TCF4-258ENST00000627320 CACNA1SQ13698 1873 aa12.23□□□□□ -0.45
TCF4-258ENST00000627320 ROCK2O75116 1388 aaKnown RBP12.23□□□□□ -0.45
TCF4-258ENST00000627320 GNPATO15228 680 aa12.23□□□□□ -0.45
TCF4-258ENST00000627320 FCHSD2O94868 740 aa12.23□□□□□ -0.45
TCF4-258ENST00000627320 PIGBQ92521 554 aa12.23□□□□□ -0.45
TCF4-258ENST00000627320 KCNA3P22001 575 aa12.22□□□□□ -0.45
TCF4-258ENST00000627320 RASSF7Q02833 373 aa12.22□□□□□ -0.45
TCF4-258ENST00000627320 DLEC1Q9Y238 1755 aa12.22□□□□□ -0.45
TCF4-258ENST00000627320 C16orf71Q8IYS4 520 aaPredicted RBP12.21□□□□□ -0.45
TCF4-258ENST00000627320 FLAD1Q8NFF5 587 aa12.21□□□□□ -0.45
TCF4-258ENST00000627320 SIN3AQ96ST3 1273 aa12.21□□□□□ -0.45
TCF4-258ENST00000627320 RNF181Q9P0P0 153 aa12.21□□□□□ -0.45
TCF4-258ENST00000627320 ADAMTS7Q9UKP4 1686 aa12.21□□□□□ -0.45
TCF4-258ENST00000627320 TJP1Q07157 1748 aa12.2□□□□□ -0.46
TCF4-258ENST00000627320 AMPHP49418 695 aa12.2□□□□□ -0.46
TCF4-258ENST00000627320 ASAP1Q9ULH1 1129 aa12.2□□□□□ -0.46
TCF4-258ENST00000627320 NSD3Q9BZ95 1437 aa12.2□□□□□ -0.46
TCF4-258ENST00000627320 VIRMAQ69YN4 1812 aaKnown RBP12.19□□□□□ -0.46
TCF4-258ENST00000627320 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
TCF4-258ENST00000627320 SSFA2P28290 1259 aa12.19□□□□□ -0.46
TCF4-258ENST00000627320 CHRNA5P30532 468 aa12.19□□□□□ -0.46
TCF4-258ENST00000627320 SIK1P57059 783 aa12.19□□□□□ -0.46
TCF4-258ENST00000627320 SLC4A9Q96Q91 983 aa12.19□□□□□ -0.46
TCF4-258ENST00000627320 PCDH11XQ9BZA7 1347 aa12.18□□□□□ -0.46
TCF4-258ENST00000627320 PCDH11YQ9BZA8 1340 aa12.18□□□□□ -0.46
TCF4-258ENST00000627320 MYCNP04198 464 aaPredicted RBP12.18□□□□□ -0.46
TCF4-258ENST00000627320 FSTL1Q12841 308 aa12.18□□□□□ -0.46
TCF4-258ENST00000627320 HDGFL2Q7Z4V5 671 aaPredicted RBP12.18□□□□□ -0.46
TCF4-258ENST00000627320 PLEKHG2Q9H7P9 1386 aa12.18□□□□□ -0.46
TCF4-258ENST00000627320 TATP17735 454 aaPredicted RBP12.17□□□□□ -0.46
TCF4-258ENST00000627320 HSP90AB2PQ58FF8 381 aa12.17□□□□□ -0.46
TCF4-258ENST00000627320 RAPGEF4Q8WZA2 1011 aa12.17□□□□□ -0.46
TCF4-258ENST00000627320 DICER1Q9UPY3 1922 aaKnown RBP12.17□□□□□ -0.46
TCF4-258ENST00000627320 ANKRD26Q9UPS8 1709 aa12.17□□□□□ -0.46
TCF4-258ENST00000627320 KDRP35968 1356 aa12.17□□□□□ -0.46
TCF4-258ENST00000627320 SRP68Q9UHB9 627 aaKnown RBP12.16□□□□□ -0.46
TCF4-258ENST00000627320 MKRN1Q9UHC7 482 aaKnown RBP12.16□□□□□ -0.46
TCF4-258ENST00000627320 COL11A2P13942 1736 aaPredicted RBP12.16□□□□□ -0.46
TCF4-258ENST00000627320 ANKRD31Q8N7Z5 1873 aa12.15□□□□□ -0.46
TCF4-258ENST00000627320 FOXN1O15353 648 aa12.15□□□□□ -0.46
TCF4-258ENST00000627320 GYS1P13807 737 aa12.15□□□□□ -0.46
TCF4-258ENST00000627320 ATP6V1AP38606 617 aa12.15□□□□□ -0.46
TCF4-258ENST00000627320 GGNBP2Q9H3C7 697 aa12.15□□□□□ -0.46
TCF4-258ENST00000627320 ZNF831Q5JPB2 1677 aa12.15□□□□□ -0.46
TCF4-258ENST00000627320 RTL1A6NKG5 1358 aa12.15□□□□□ -0.46
TCF4-258ENST00000627320 POTEIP0CG38 1075 aa12.14□□□□□ -0.47
TCF4-258ENST00000627320 POTEJP0CG39 1038 aa12.14□□□□□ -0.47
TCF4-258ENST00000627320 TGFB2P61812 414 aa12.14□□□□□ -0.47
TCF4-258ENST00000627320 DDR1Q08345 913 aa12.14□□□□□ -0.47
TCF4-258ENST00000627320 FAM161AQ3B820 660 aa12.14□□□□□ -0.47
TCF4-258ENST00000627320 SMC1BQ8NDV3 1235 aa12.14□□□□□ -0.47
TCF4-258ENST00000627320 ARHGEF1Q92888 912 aaKnown RBP12.14□□□□□ -0.47
TCF4-258ENST00000627320 COG3Q96JB2 828 aa12.14□□□□□ -0.47
TCF4-258ENST00000627320 DCAF5Q96JK2 942 aa12.14□□□□□ -0.47
TCF4-258ENST00000627320 KDM2BQ8NHM5 1336 aa12.13□□□□□ -0.47
TCF4-258ENST00000627320 POTECB2RU33 542 aa12.13□□□□□ -0.47
TCF4-258ENST00000627320 ATG3Q9NT62 314 aa12.13□□□□□ -0.47
TCF4-258ENST00000627320 NRXN2Q9P2S2 1712 aa12.12□□□□□ -0.47
TCF4-258ENST00000627320 TMF1P82094 1093 aa12.12□□□□□ -0.47
TCF4-258ENST00000627320 NEUROD1Q13562 356 aa12.12□□□□□ -0.47
TCF4-258ENST00000627320 SMARCC1Q92922 1105 aaPredicted RBP12.12□□□□□ -0.47
TCF4-258ENST00000627320 FER1L6Q2WGJ9 1857 aa12.12□□□□□ -0.47
TCF4-258ENST00000627320 KDM6AO15550 1401 aaPredicted RBP12.11□□□□□ -0.47
TCF4-258ENST00000627320 SMG6Q86US8 1419 aaKnown RBP12.11□□□□□ -0.47
TCF4-258ENST00000627320 FKBP8Q14318 412 aa12.11□□□□□ -0.47
TCF4-258ENST00000627320 CCDC87Q9NVE4 849 aa12.11□□□□□ -0.47
TCF4-258ENST00000627320 EMILIN1Q9Y6C2 1016 aa12.11□□□□□ -0.47
TCF4-258ENST00000627320 NCAPD2Q15021 1401 aa12.11□□□□□ -0.47
TCF4-258ENST00000627320 INSRP06213 1382 aa12.1□□□□□ -0.47
TCF4-258ENST00000627320 TERF2IPQ9NYB0 399 aa12.1□□□□□ -0.47
TCF4-258ENST00000627320 TMOD3Q9NYL9 352 aa12.1□□□□□ -0.47
TCF4-258ENST00000627320 TNRC18O15417 2968 aaPredicted RBP12.09□□□□□ -0.47
TCF4-258ENST00000627320 CARMIL3Q8ND23 1372 aa12.09□□□□□ -0.47
TCF4-258ENST00000627320 DALRD3Q5D0E6 543 aaKnown RBP12.09□□□□□ -0.47
TCF4-258ENST00000627320 TRAPPC3LQ5T215 181 aa12.09□□□□□ -0.47
TCF4-258ENST00000627320 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
TCF4-258ENST00000627320 PIM2Q9P1W9 311 aa12.09□□□□□ -0.47
TCF4-258ENST00000627320 PARP3Q9Y6F1 533 aa12.09□□□□□ -0.47
TCF4-258ENST00000627320 CGNL1Q0VF96 1302 aa12.09□□□□□ -0.47
TCF4-258ENST00000627320 FYB1O15117 783 aa12.08□□□□□ -0.48
TCF4-258ENST00000627320 RTCBQ9Y3I0 505 aaKnown RBP12.08□□□□□ -0.48
TCF4-258ENST00000627320 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
TCF4-258ENST00000627320 NKX1-1Q15270 411 aaPredicted RBP12.07□□□□□ -0.48
TCF4-258ENST00000627320 CARD11Q9BXL7 1154 aa12.07□□□□□ -0.48
TCF4-258ENST00000627320 FLT4P35916 1363 aa12.06□□□□□ -0.48
TCF4-258ENST00000627320 NFKBIEO00221 500 aa12.06□□□□□ -0.48
TCF4-258ENST00000627320 PHKG2P15735 406 aa12.06□□□□□ -0.48
TCF4-258ENST00000627320 NLGN1Q8N2Q7 840 aa12.06□□□□□ -0.48
TCF4-258ENST00000627320 SCN11AQ9UI33 1791 aa12.05□□□□□ -0.48
TCF4-258ENST00000627320 SLX4Q8IY92 1834 aa12.05□□□□□ -0.48
TCF4-258ENST00000627320 GLTPD2A6NH11 291 aa12.05□□□□□ -0.48
TCF4-258ENST00000627320 RFC4P35249 363 aa12.05□□□□□ -0.48
TCF4-258ENST00000627320 LBX1P52954 281 aa12.05□□□□□ -0.48
TCF4-258ENST00000627320 TESK2Q96S53 571 aa12.05□□□□□ -0.48
TCF4-258ENST00000627320 ZNF219Q9P2Y4 722 aaPredicted RBP12.05□□□□□ -0.48
TCF4-258ENST00000627320 U3KPZ7 1027 aaPredicted RBP12.05□□□□□ -0.48
TCF4-258ENST00000627320 POLRMTO00411 1230 aaKnown RBP12.04□□□□□ -0.48
TCF4-258ENST00000627320 RPS6KA4O75676 772 aa12.04□□□□□ -0.48
TCF4-258ENST00000627320 VEGFAP15692 232 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms