RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 LMOD3Q0VAK6 560 aa10.81□□□□□ -0.68
CHD2-209ENST00000627185 DZIP1LQ8IYY4 767 aaKnown RBP10.81□□□□□ -0.68
CHD2-209ENST00000627185 STK26Q9P289 416 aa10.81□□□□□ -0.68
CHD2-209ENST00000627185 ARHGAP23Q9P227 1491 aa10.81□□□□□ -0.68
CHD2-209ENST00000627185 METP08581 1390 aa10.8□□□□□ -0.68
CHD2-209ENST00000627185 SLIT1O75093 1534 aa10.8□□□□□ -0.68
CHD2-209ENST00000627185 LRRC7Q96NW7 1537 aa10.8□□□□□ -0.68
CHD2-209ENST00000627185 ZNF853P0CG23 659 aa10.8□□□□□ -0.68
CHD2-209ENST00000627185 ATF7IPQ6VMQ6 1270 aa10.8□□□□□ -0.68
CHD2-209ENST00000627185 BCL2L12Q9HB09 334 aa10.8□□□□□ -0.68
CHD2-209ENST00000627185 IFT57Q9NWB7 429 aa10.8□□□□□ -0.68
CHD2-209ENST00000627185 ADAMTS13Q76LX8 1427 aa10.8□□□□□ -0.68
CHD2-209ENST00000627185 USP31Q70CQ4 1352 aa10.79□□□□□ -0.68
CHD2-209ENST00000627185 CANXP27824 592 aaKnown RBP10.79□□□□□ -0.68
CHD2-209ENST00000627185 IL13P35225 146 aa10.79□□□□□ -0.68
CHD2-209ENST00000627185 NFE2L2Q16236 605 aa10.79□□□□□ -0.68
CHD2-209ENST00000627185 NUTM2DQ5VT03 806 aaPredicted RBP10.79□□□□□ -0.68
CHD2-209ENST00000627185 SMC5Q8IY18 1101 aa10.79□□□□□ -0.68
CHD2-209ENST00000627185 PANK1Q8TE04 598 aa10.79□□□□□ -0.68
CHD2-209ENST00000627185 COG6Q9Y2V7 657 aa10.79□□□□□ -0.68
CHD2-209ENST00000627185 VIRMAQ69YN4 1812 aaKnown RBP10.79□□□□□ -0.68
CHD2-209ENST00000627185 KIF13AQ9H1H9 1805 aa10.79□□□□□ -0.68
CHD2-209ENST00000627185 C3P01024 1663 aa10.79□□□□□ -0.68
CHD2-209ENST00000627185 DIP2AQ14689 1571 aa10.78□□□□□ -0.68
CHD2-209ENST00000627185 NRKQ7Z2Y5 1582 aa10.78□□□□□ -0.68
CHD2-209ENST00000627185 PTCH1Q13635 1447 aa10.78□□□□□ -0.68
CHD2-209ENST00000627185 SSH2Q76I76 1423 aa10.78□□□□□ -0.68
CHD2-209ENST00000627185 NEFMP07197 916 aa10.78□□□□□ -0.68
CHD2-209ENST00000627185 RLBP1P12271 317 aa10.78□□□□□ -0.68
CHD2-209ENST00000627185 TNNT2P45379 298 aaPredicted RBP10.78□□□□□ -0.68
CHD2-209ENST00000627185 RIPK4P57078 832 aa10.78□□□□□ -0.68
CHD2-209ENST00000627185 PCDHB15Q9Y5E8 787 aa10.78□□□□□ -0.68
CHD2-209ENST00000627185 USP19O94966 1318 aa10.78□□□□□ -0.68
CHD2-209ENST00000627185 UBR1Q8IWV7 1749 aa10.78□□□□□ -0.68
CHD2-209ENST00000627185 AKAP12Q02952 1782 aa10.77□□□□□ -0.68
CHD2-209ENST00000627185 TRIM27P14373 513 aa10.77□□□□□ -0.69
CHD2-209ENST00000627185 GNAI1P63096 354 aa10.77□□□□□ -0.69
CHD2-209ENST00000627185 PDE4DQ08499 809 aa10.77□□□□□ -0.69
CHD2-209ENST00000627185 NUDT16Q96DE0 195 aaKnown RBP10.77□□□□□ -0.69
CHD2-209ENST00000627185 ZBTB40Q9NUA8 1239 aa10.77□□□□□ -0.69
CHD2-209ENST00000627185 RBM27Q9P2N5 1060 aaKnown RBP10.77□□□□□ -0.69
CHD2-209ENST00000627185 RRP7AQ9Y3A4 280 aaKnown RBP10.77□□□□□ -0.69
CHD2-209ENST00000627185 OVOS2A0A0J9YW53 1432 aa10.76□□□□□ -0.69
CHD2-209ENST00000627185 OVOS2Q6IE36 1432 aa10.76□□□□□ -0.69
CHD2-209ENST00000627185 TOPAZ1Q8N9V7 1692 aa10.76□□□□□ -0.69
CHD2-209ENST00000627185 EIF5BO60841 1220 aaKnown RBP10.76□□□□□ -0.69
CHD2-209ENST00000627185 EXOSC9Q06265 439 aaKnown RBP10.76□□□□□ -0.69
CHD2-209ENST00000627185 AMHR2Q16671 573 aa10.76□□□□□ -0.69
CHD2-209ENST00000627185 TMEM132AQ24JP5 1023 aa10.76□□□□□ -0.69
CHD2-209ENST00000627185 RTL5Q5HYW3 569 aaPredicted RBP10.76□□□□□ -0.69
CHD2-209ENST00000627185 SSH1Q8WYL5 1049 aa10.76□□□□□ -0.69
CHD2-209ENST00000627185 TBX22Q9Y458 520 aa10.76□□□□□ -0.69
CHD2-209ENST00000627185 U2SURPO15042 1029 aaKnown RBP10.75□□□□□ -0.69
CHD2-209ENST00000627185 WAPLQ7Z5K2 1190 aa10.75□□□□□ -0.69
CHD2-209ENST00000627185 TTC13Q8NBP0 860 aa10.75□□□□□ -0.69
CHD2-209ENST00000627185 COG3Q96JB2 828 aa10.75□□□□□ -0.69
CHD2-209ENST00000627185 ESF1Q9H501 851 aaKnown RBP10.75□□□□□ -0.69
CHD2-209ENST00000627185 SMC4Q9NTJ3 1288 aa10.75□□□□□ -0.69
CHD2-209ENST00000627185 TTC21AQ8NDW8 1320 aa10.75□□□□□ -0.69
CHD2-209ENST00000627185 SAFB2Q14151 953 aaKnown RBP eCLIP10.74□□□□□ -0.69
CHD2-209ENST00000627185 FTSJ3Q8IY81 847 aaKnown RBP10.74□□□□□ -0.69
CHD2-209ENST00000627185 FRAT1Q92837 279 aaPredicted RBP10.74□□□□□ -0.69
CHD2-209ENST00000627185 TTC21BQ7Z4L5 1316 aa10.74□□□□□ -0.69
CHD2-209ENST00000627185 KIAA0232Q92628 1395 aa10.74□□□□□ -0.69
CHD2-209ENST00000627185 PTPRUQ92729 1446 aa10.74□□□□□ -0.69
CHD2-209ENST00000627185 VAMP4O75379 141 aa10.73□□□□□ -0.69
CHD2-209ENST00000627185 PTPREP23469 700 aa10.73□□□□□ -0.69
CHD2-209ENST00000627185 PRKAR2BP31323 418 aa10.73□□□□□ -0.69
CHD2-209ENST00000627185 PRSS12P56730 875 aa10.73□□□□□ -0.69
CHD2-209ENST00000627185 PADI6Q6TGC4 694 aa10.73□□□□□ -0.69
CHD2-209ENST00000627185 TBC1D32Q96NH3 1257 aa10.73□□□□□ -0.69
CHD2-209ENST00000627185 GPBP1L1Q9HC44 474 aaPredicted RBP10.73□□□□□ -0.69
CHD2-209ENST00000627185 PDZRN3Q9UPQ7 1066 aa10.73□□□□□ -0.69
CHD2-209ENST00000627185 USP6P35125 1406 aa10.73□□□□□ -0.69
CHD2-209ENST00000627185 ANKARQ7Z5J8 1434 aa10.73□□□□□ -0.69
CHD2-209ENST00000627185 NALCNQ8IZF0 1738 aa10.72□□□□□ -0.69
CHD2-209ENST00000627185 PPP1R3GB7ZBB8 358 aa10.72□□□□□ -0.69
CHD2-209ENST00000627185 ST18O60284 1047 aa10.72□□□□□ -0.69
CHD2-209ENST00000627185 COL9A1P20849 921 aa10.72□□□□□ -0.69
CHD2-209ENST00000627185 BECN1Q14457 450 aa10.72□□□□□ -0.69
CHD2-209ENST00000627185 GCC1Q96CN9 775 aa10.72□□□□□ -0.69
CHD2-209ENST00000627185 UPF2Q9HAU5 1272 aaKnown RBP10.72□□□□□ -0.69
CHD2-209ENST00000627185 ABCC4O15439 1325 aa10.72□□□□□ -0.69
CHD2-209ENST00000627185 SOS1Q07889 1333 aaPredicted RBP10.72□□□□□ -0.69
CHD2-209ENST00000627185 ROBO2Q9HCK4 1378 aa10.72□□□□□ -0.69
CHD2-209ENST00000627185 USP54Q70EL1 1684 aa10.71□□□□□ -0.69
CHD2-209ENST00000627185 TSR2Q969E8 191 aaKnown RBP10.71□□□□□ -0.69
CHD2-209ENST00000627185 PRR36Q9H6K5 1346 aa10.71□□□□□ -0.69
CHD2-209ENST00000627185 ITSN1Q15811 1721 aa10.7□□□□□ -0.7
CHD2-209ENST00000627185 ARHGEF10O15013 1369 aa10.7□□□□□ -0.7
CHD2-209ENST00000627185 KDRP35968 1356 aa10.7□□□□□ -0.7
CHD2-209ENST00000627185 DEKP35659 375 aaKnown RBP10.7□□□□□ -0.7
CHD2-209ENST00000627185 RGS3P49796 1198 aa10.7□□□□□ -0.7
CHD2-209ENST00000627185 NUCB1Q02818 461 aa10.7□□□□□ -0.7
CHD2-209ENST00000627185 NPM2Q86SE8 214 aaKnown RBP10.7□□□□□ -0.7
CHD2-209ENST00000627185 MRPL50Q8N5N7 158 aaKnown RBP10.7□□□□□ -0.7
CHD2-209ENST00000627185 API5Q9BZZ5 524 aaKnown RBP10.7□□□□□ -0.7
CHD2-209ENST00000627185 KDM4CQ9H3R0 1056 aa10.7□□□□□ -0.7
CHD2-209ENST00000627185 DAXXQ9UER7 740 aaPredicted RBP10.7□□□□□ -0.7
CHD2-209ENST00000627185 NOB1Q9ULX3 412 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms