RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 GPATCH11Q8N954 259 aa10.67□□□□□ -0.7
SMN2-214ENST00000626847 SPAG9O60271 1321 aaKnown RBP10.67□□□□□ -0.7
SMN2-214ENST00000626847 USP17L8P0C7I0 530 aa10.67□□□□□ -0.7
SMN2-214ENST00000626847 MEX3CQ5U5Q3 659 aaKnown RBP10.67□□□□□ -0.7
SMN2-214ENST00000626847 YY1AP1Q9H869 796 aa10.67□□□□□ -0.7
SMN2-214ENST00000626847 NLRP1Q9C000 1473 aa10.66□□□□□ -0.7
SMN2-214ENST00000626847 PREX2Q70Z35 1606 aa10.66□□□□□ -0.7
SMN2-214ENST00000626847 SLC10A3P09131 477 aa10.66□□□□□ -0.7
SMN2-214ENST00000626847 KDM5DQ9BY66 1539 aa10.65□□□□□ -0.7
SMN2-214ENST00000626847 ZC3H13Q5T200 1668 aaKnown RBP10.65□□□□□ -0.7
SMN2-214ENST00000626847 PZPP20742 1482 aa10.65□□□□□ -0.7
SMN2-214ENST00000626847 RNF40O75150 1001 aa10.65□□□□□ -0.7
SMN2-214ENST00000626847 SLF2Q8IX21 1173 aa10.65□□□□□ -0.7
SMN2-214ENST00000626847 TSC1Q92574 1164 aa10.65□□□□□ -0.7
SMN2-214ENST00000626847 MIA2Q96PC5 1412 aa10.65□□□□□ -0.7
SMN2-214ENST00000626847 SPATA31A6Q5VVP1 1343 aa10.64□□□□□ -0.71
SMN2-214ENST00000626847 PHLPP1O60346 1717 aa10.64□□□□□ -0.71
SMN2-214ENST00000626847 CLIP1P30622 1438 aa10.64□□□□□ -0.71
SMN2-214ENST00000626847 GUCA2AQ02747 115 aa10.64□□□□□ -0.71
SMN2-214ENST00000626847 FAM98CQ17RN3 349 aaKnown RBP10.64□□□□□ -0.71
SMN2-214ENST00000626847 CERS3Q8IU89 383 aa10.64□□□□□ -0.71
SMN2-214ENST00000626847 SLC4A5Q9BY07 1137 aa10.64□□□□□ -0.71
SMN2-214ENST00000626847 TBC1D2BQ9UPU7 963 aa10.64□□□□□ -0.71
SMN2-214ENST00000626847 AXIN2Q9Y2T1 843 aa10.64□□□□□ -0.71
SMN2-214ENST00000626847 ATP7AQ04656 1500 aa10.64□□□□□ -0.71
SMN2-214ENST00000626847 RGS12O14924 1447 aa10.63□□□□□ -0.71
SMN2-214ENST00000626847 TERF1P54274 439 aa10.63□□□□□ -0.71
SMN2-214ENST00000626847 LSM11P83369 360 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMN2-214ENST00000626847 MTMR2Q13614 643 aa10.63□□□□□ -0.71
SMN2-214ENST00000626847 CC2D1BQ5T0F9 858 aaKnown RBP10.63□□□□□ -0.71
SMN2-214ENST00000626847 FAM43BQ6ZT52 329 aaPredicted RBP10.63□□□□□ -0.71
SMN2-214ENST00000626847 TMEM94Q12767 1356 aa10.63□□□□□ -0.71
SMN2-214ENST00000626847 DMRTA1Q5VZB9 504 aa10.62□□□□□ -0.71
SMN2-214ENST00000626847 TMED8Q6PL24 325 aaPredicted RBP10.62□□□□□ -0.71
SMN2-214ENST00000626847 HELBQ8NG08 1087 aaPredicted RBP10.62□□□□□ -0.71
SMN2-214ENST00000626847 HLA-CQ95604 372 aa10.62□□□□□ -0.71
SMN2-214ENST00000626847 GTPBP4Q9BZE4 634 aaKnown RBP10.62□□□□□ -0.71
SMN2-214ENST00000626847 LRRC9Q6ZRR7 1453 aa10.62□□□□□ -0.71
SMN2-214ENST00000626847 C6orf229H3BNL8 230 aa10.61□□□□□ -0.71
SMN2-214ENST00000626847 SAMD7Q7Z3H4 446 aa10.61□□□□□ -0.71
SMN2-214ENST00000626847 CALR3Q96L12 384 aaKnown RBP10.61□□□□□ -0.71
SMN2-214ENST00000626847 PCDHGC3Q9UN70 934 aa10.61□□□□□ -0.71
SMN2-214ENST00000626847 INO80Q9ULG1 1556 aaPredicted RBP10.61□□□□□ -0.71
SMN2-214ENST00000626847 SYCP2Q9BX26 1530 aa10.61□□□□□ -0.71
SMN2-214ENST00000626847 ZBTB7CA1YPR0 619 aa10.6□□□□□ -0.71
SMN2-214ENST00000626847 LETM1O95202 739 aaPredicted RBP10.6□□□□□ -0.71
SMN2-214ENST00000626847 PBX2P40425 430 aa10.6□□□□□ -0.71
SMN2-214ENST00000626847 DMTNQ08495 405 aa10.6□□□□□ -0.71
SMN2-214ENST00000626847 NBPF11Q86T75 865 aa10.6□□□□□ -0.71
SMN2-214ENST00000626847 NBPF3Q9H094 633 aa10.6□□□□□ -0.71
SMN2-214ENST00000626847 NDUFB9Q9Y6M9 179 aa10.6□□□□□ -0.71
SMN2-214ENST00000626847 COL16A1Q07092 1604 aaPredicted RBP10.6□□□□□ -0.71
SMN2-214ENST00000626847 MAP3K1Q13233 1512 aa10.6□□□□□ -0.71
SMN2-214ENST00000626847 FGD6Q6ZV73 1430 aa10.6□□□□□ -0.71
SMN2-214ENST00000626847 TTC36A6NLP5 189 aa10.59□□□□□ -0.71
SMN2-214ENST00000626847 CFHP08603 1231 aa10.59□□□□□ -0.71
SMN2-214ENST00000626847 HNRNPMP52272 730 aaKnown RBP eCLIP10.59□□□□□ -0.71
SMN2-214ENST00000626847 FUT2Q10981 343 aa10.59□□□□□ -0.71
SMN2-214ENST00000626847 OS9Q13438 667 aaPredicted RBP10.59□□□□□ -0.71
SMN2-214ENST00000626847 RALBP1Q15311 655 aa10.59□□□□□ -0.71
SMN2-214ENST00000626847 PRDM16Q9HAZ2 1276 aa10.59□□□□□ -0.71
SMN2-214ENST00000626847 TCERG1O14776 1098 aaKnown RBP10.58□□□□□ -0.72
SMN2-214ENST00000626847 CTDSPL2Q05D32 466 aa10.58□□□□□ -0.72
SMN2-214ENST00000626847 NBPF1Q3BBV0 1214 aa10.58□□□□□ -0.72
SMN2-214ENST00000626847 L1TD1Q5T7N2 865 aaKnown RBP10.58□□□□□ -0.72
SMN2-214ENST00000626847 POTEEQ6S8J3 1075 aa10.58□□□□□ -0.72
SMN2-214ENST00000626847 VPS9D1Q9Y2B5 631 aa10.58□□□□□ -0.72
SMN2-214ENST00000626847 LAPTM4BQ86VI4 370 aa10.58□□□□□ -0.72
SMN2-214ENST00000626847 GEMIN8Q9NWZ8 242 aaKnown RBP10.58□□□□□ -0.72
SMN2-214ENST00000626847 AFF2P51816 1311 aa10.57□□□□□ -0.72
SMN2-214ENST00000626847 SCAF11Q99590 1463 aaKnown RBP10.57□□□□□ -0.72
SMN2-214ENST00000626847 ATAD2Q6PL18 1390 aa10.57□□□□□ -0.72
SMN2-214ENST00000626847 ATP6V1AP38606 617 aa10.57□□□□□ -0.72
SMN2-214ENST00000626847 KMT5BQ4FZB7 885 aa10.57□□□□□ -0.72
SMN2-214ENST00000626847 DNTTIP2Q5QJE6 756 aaKnown RBP10.57□□□□□ -0.72
SMN2-214ENST00000626847 SLAIN2Q9P270 581 aa10.57□□□□□ -0.72
SMN2-214ENST00000626847 LTKP29376 864 aa10.56□□□□□ -0.72
SMN2-214ENST00000626847 RBM6P78332 1123 aaKnown RBP10.56□□□□□ -0.72
SMN2-214ENST00000626847 HSP90AB3PQ58FF7 597 aa10.56□□□□□ -0.72
SMN2-214ENST00000626847 CDC42BPAQ5VT25 1732 aa10.55□□□□□ -0.72
SMN2-214ENST00000626847 ADGBQ8N7X0 1667 aa10.55□□□□□ -0.72
SMN2-214ENST00000626847 POM121CA8CG34 1229 aa10.55□□□□□ -0.72
SMN2-214ENST00000626847 CASC1Q6TDU7 716 aa10.55□□□□□ -0.72
SMN2-214ENST00000626847 GLMNQ92990 594 aa10.55□□□□□ -0.72
SMN2-214ENST00000626847 CARD10Q9BWT7 1032 aa10.55□□□□□ -0.72
SMN2-214ENST00000626847 WASHC4Q2M389 1173 aa10.54□□□□□ -0.72
SMN2-214ENST00000626847 NECTIN2Q92692 538 aa10.54□□□□□ -0.72
SMN2-214ENST00000626847 GJD4Q96KN9 370 aaPredicted RBP10.54□□□□□ -0.72
SMN2-214ENST00000626847 LRP5O75197 1615 aa10.54□□□□□ -0.72
SMN2-214ENST00000626847 SHPRHQ149N8 1683 aa10.54□□□□□ -0.72
SMN2-214ENST00000626847 FMN1Q68DA7 1419 aa10.54□□□□□ -0.72
SMN2-214ENST00000626847 KIAA1107Q9UPP5 1409 aa10.54□□□□□ -0.72
SMN2-214ENST00000626847 KCNA6P17658 529 aa10.53□□□□□ -0.72
SMN2-214ENST00000626847 TXNDC2Q86VQ3 553 aa10.53□□□□□ -0.72
SMN2-214ENST00000626847 MRPL50Q8N5N7 158 aaKnown RBP10.53□□□□□ -0.72
SMN2-214ENST00000626847 ZFRQ96KR1 1074 aaKnown RBP10.53□□□□□ -0.72
SMN2-214ENST00000626847 TSPYL1Q9H0U9 437 aa10.53□□□□□ -0.72
SMN2-214ENST00000626847 QTRT2Q9H974 415 aaKnown RBP10.53□□□□□ -0.72
SMN2-214ENST00000626847 HMX1Q9NP08 348 aaPredicted RBP10.53□□□□□ -0.72
SMN2-214ENST00000626847 DHX29Q7Z478 1369 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms