RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 HDAC1Q13547 482 aaPredicted RBP14.89□□□□□ -0.03
CCDC163-201ENST00000625766 DCAF5Q96JK2 942 aa14.89□□□□□ -0.03
CCDC163-201ENST00000625766 STK31Q9BXU1 1019 aa14.89□□□□□ -0.03
CCDC163-201ENST00000625766 HEG1Q9ULI3 1381 aa14.89□□□□□ -0.03
CCDC163-201ENST00000625766 ADAMTS7Q9UKP4 1686 aa14.89□□□□□ -0.03
CCDC163-201ENST00000625766 CYP27B1O15528 508 aa14.88□□□□□ -0.03
CCDC163-201ENST00000625766 SLC52A2Q9HAB3 445 aa14.88□□□□□ -0.03
CCDC163-201ENST00000625766 ABCA3Q99758 1704 aa14.87□□□□□ -0.03
CCDC163-201ENST00000625766 ZCRB1Q8TBF4 217 aaKnown RBP14.87□□□□□ -0.03
CCDC163-201ENST00000625766 KCNQ3O43525 872 aa14.86□□□□□ -0.03
CCDC163-201ENST00000625766 NKX1-1Q15270 411 aaPredicted RBP14.86□□□□□ -0.03
CCDC163-201ENST00000625766 LARP1Q6PKG0 1096 aaKnown RBP14.86□□□□□ -0.03
CCDC163-201ENST00000625766 RGS12O14924 1447 aa14.86□□□□□ -0.03
CCDC163-201ENST00000625766 IL2RBP14784 551 aa14.86□□□□□ -0.03
CCDC163-201ENST00000625766 COL22A1Q8NFW1 1626 aaPredicted RBP14.85□□□□□ -0.03
CCDC163-201ENST00000625766 G2E3Q7L622 706 aa14.85□□□□□ -0.03
CCDC163-201ENST00000625766 BTG4Q9NY30 223 aa14.85□□□□□ -0.03
CCDC163-201ENST00000625766 GIGYF1O75420 1035 aaPredicted RBP14.85□□□□□ -0.03
CCDC163-201ENST00000625766 HDGFL1Q5TGJ6 251 aa14.85□□□□□ -0.03
CCDC163-201ENST00000625766 RBM19Q9Y4C8 960 aaKnown RBP14.85□□□□□ -0.03
CCDC163-201ENST00000625766 KDM6AO15550 1401 aaPredicted RBP14.84□□□□□ -0.03
CCDC163-201ENST00000625766 NFATC2IPQ8NCF5 419 aa14.84□□□□□ -0.03
CCDC163-201ENST00000625766 STRN4Q9NRL3 753 aa14.84□□□□□ -0.03
CCDC163-201ENST00000625766 KDM3BQ7LBC6 1761 aa14.83□□□□□ -0.03
CCDC163-201ENST00000625766 FLIIQ13045 1269 aa14.83□□□□□ -0.03
CCDC163-201ENST00000625766 ZNF790Q6PG37 636 aa14.83□□□□□ -0.03
CCDC163-201ENST00000625766 PCDH11XQ9BZA7 1347 aa14.83□□□□□ -0.04
CCDC163-201ENST00000625766 PCDH11YQ9BZA8 1340 aa14.83□□□□□ -0.04
CCDC163-201ENST00000625766 PKD1L3Q7Z443 1732 aa14.83□□□□□ -0.04
CCDC163-201ENST00000625766 CACNA1FO60840 1977 aa14.83□□□□□ -0.04
CCDC163-201ENST00000625766 CCT4P50991 539 aaKnown RBP14.83□□□□□ -0.04
CCDC163-201ENST00000625766 ERVV-2B6SEH9 535 aa14.82□□□□□ -0.04
CCDC163-201ENST00000625766 SMC5Q8IY18 1101 aa14.81□□□□□ -0.04
CCDC163-201ENST00000625766 SIPA1L3O60292 1781 aaPredicted RBP14.81□□□□□ -0.04
CCDC163-201ENST00000625766 EIF2S2P20042 333 aaKnown RBP14.8□□□□□ -0.04
CCDC163-201ENST00000625766 COL14A1Q05707 1796 aaKnown RBP14.8□□□□□ -0.04
CCDC163-201ENST00000625766 SCN11AQ9UI33 1791 aa14.8□□□□□ -0.04
CCDC163-201ENST00000625766 MRC1P22897 1456 aa14.8□□□□□ -0.04
CCDC163-201ENST00000625766 CABP4P57796 275 aa14.8□□□□□ -0.04
CCDC163-201ENST00000625766 DBF4Q9UBU7 674 aaPredicted RBP14.8□□□□□ -0.04
CCDC163-201ENST00000625766 COL16A1Q07092 1604 aaPredicted RBP14.79□□□□□ -0.04
CCDC163-201ENST00000625766 FKBP5Q13451 457 aaPredicted RBP14.79□□□□□ -0.04
CCDC163-201ENST00000625766 NECTIN2Q92692 538 aa14.79□□□□□ -0.04
CCDC163-201ENST00000625766 UBAP1LF5GYI3 381 aa14.78□□□□□ -0.04
CCDC163-201ENST00000625766 PIP4K2BP78356 416 aa14.78□□□□□ -0.04
CCDC163-201ENST00000625766 SKAP1Q86WV1 359 aa14.78□□□□□ -0.04
CCDC163-201ENST00000625766 RPAP2Q8IXW5 612 aaPredicted RBP14.78□□□□□ -0.04
CCDC163-201ENST00000625766 PARP4Q9UKK3 1724 aaKnown RBP14.78□□□□□ -0.04
CCDC163-201ENST00000625766 F6X3S4 739 aa14.78□□□□□ -0.04
CCDC163-201ENST00000625766 SLC39A6Q13433 755 aa14.78□□□□□ -0.04
CCDC163-201ENST00000625766 PDZRN3Q9UPQ7 1066 aa14.78□□□□□ -0.04
CCDC163-201ENST00000625766 VIRMAQ69YN4 1812 aaKnown RBP14.78□□□□□ -0.04
CCDC163-201ENST00000625766 PDE4AP27815 886 aa14.77□□□□□ -0.04
CCDC163-201ENST00000625766 SIRT2Q8IXJ6 389 aa14.77□□□□□ -0.04
CCDC163-201ENST00000625766 BACH2Q9BYV9 841 aa14.77□□□□□ -0.04
CCDC163-201ENST00000625766 PHAXQ9H814 394 aaKnown RBP14.77□□□□□ -0.04
CCDC163-201ENST00000625766 CHPF2Q9P2E5 772 aa14.77□□□□□ -0.04
CCDC163-201ENST00000625766 GCC1Q96CN9 775 aa14.77□□□□□ -0.05
CCDC163-201ENST00000625766 HYPKQ9NX55 129 aa14.77□□□□□ -0.05
CCDC163-201ENST00000625766 PHLPP1O60346 1717 aa14.76□□□□□ -0.05
CCDC163-201ENST00000625766 SNRPA1P09661 255 aaKnown RBP14.76□□□□□ -0.05
CCDC163-201ENST00000625766 ZNF496Q96IT1 587 aaPredicted RBP14.76□□□□□ -0.05
CCDC163-201ENST00000625766 FMNL2Q96PY5 1086 aa14.76□□□□□ -0.05
CCDC163-201ENST00000625766 CDCA7Q9BWT1 371 aaPredicted RBP14.76□□□□□ -0.05
CCDC163-201ENST00000625766 DDX21Q9NR30 783 aaKnown RBP eCLIP14.76□□□□□ -0.05
CCDC163-201ENST00000625766 DISP2A7MBM2 1401 aa14.76□□□□□ -0.05
CCDC163-201ENST00000625766 SLC4A10Q6U841 1118 aa14.75□□□□□ -0.05
CCDC163-201ENST00000625766 TTC5Q8N0Z6 440 aa14.75□□□□□ -0.05
CCDC163-201ENST00000625766 ANKRD44Q8N8A2 993 aa14.75□□□□□ -0.05
CCDC163-201ENST00000625766 DDX54Q8TDD1 881 aaKnown RBP14.75□□□□□ -0.05
CCDC163-201ENST00000625766 THRAP3Q9Y2W1 955 aaKnown RBP14.75□□□□□ -0.05
CCDC163-201ENST00000625766 PDIA6Q15084 440 aa14.75□□□□□ -0.05
CCDC163-201ENST00000625766 PRAMEF22A3QJZ6 481 aa14.74□□□□□ -0.05
CCDC163-201ENST00000625766 MEIS3Q99687 375 aa14.74□□□□□ -0.05
CCDC163-201ENST00000625766 C1orf115Q9H7X2 142 aa14.74□□□□□ -0.05
CCDC163-201ENST00000625766 USP35Q9P2H5 1018 aa14.74□□□□□ -0.05
CCDC163-201ENST00000625766 PXDNLA1KZ92 1463 aa14.74□□□□□ -0.05
CCDC163-201ENST00000625766 GNAI3P08754 354 aa14.73□□□□□ -0.05
CCDC163-201ENST00000625766 RGS3P49796 1198 aa14.73□□□□□ -0.05
CCDC163-201ENST00000625766 NUCB1Q02818 461 aa14.73□□□□□ -0.05
CCDC163-201ENST00000625766 DCTPP1Q9H773 170 aa14.73□□□□□ -0.05
CCDC163-201ENST00000625766 EXOC5O00471 708 aa14.73□□□□□ -0.05
CCDC163-201ENST00000625766 ADAMTS2O95450 1211 aa14.73□□□□□ -0.05
CCDC163-201ENST00000625766 PI4KAP2A4QPH2 592 aa14.72□□□□□ -0.05
CCDC163-201ENST00000625766 CEP85Q6P2H3 762 aa14.72□□□□□ -0.05
CCDC163-201ENST00000625766 KSR2Q6VAB6 950 aa14.72□□□□□ -0.05
CCDC163-201ENST00000625766 AEBP2Q6ZN18 517 aaPredicted RBP14.72□□□□□ -0.05
CCDC163-201ENST00000625766 PI4KAP1Q8N8J0 262 aa14.72□□□□□ -0.05
CCDC163-201ENST00000625766 DNAAF4Q8WXU2 420 aa14.72□□□□□ -0.05
CCDC163-201ENST00000625766 SPATA31A1Q5TZJ5 1347 aa14.72□□□□□ -0.05
CCDC163-201ENST00000625766 GNAI2P04899 355 aa14.72□□□□□ -0.05
CCDC163-201ENST00000625766 FAM161AQ3B820 660 aa14.72□□□□□ -0.05
CCDC163-201ENST00000625766 BEND3Q5T5X7 828 aa14.72□□□□□ -0.05
CCDC163-201ENST00000625766 CERKQ8TCT0 537 aa14.72□□□□□ -0.05
CCDC163-201ENST00000625766 USP44Q9H0E7 712 aa14.72□□□□□ -0.05
CCDC163-201ENST00000625766 USP16Q9Y5T5 823 aa14.72□□□□□ -0.05
CCDC163-201ENST00000625766 PROSER3Q2NL68 480 aa14.71□□□□□ -0.05
CCDC163-201ENST00000625766 SRCIN1Q9C0H9 1055 aa14.71□□□□□ -0.05
CCDC163-201ENST00000625766 JCADQ9P266 1359 aa14.71□□□□□ -0.06
CCDC163-201ENST00000625766 ATP10DQ9P241 1426 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms