RNA–Protein interactions for RNA: ENST00000625581.2

SOX2-OT-237, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 495 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-237ENST00000625581 ANP32CO43423 234 aa19.28■□□□□ 0.68
SOX2-OT-237ENST00000625581 CABP4P57796 275 aa19.28■□□□□ 0.68
SOX2-OT-237ENST00000625581 ATG3Q9NT62 314 aa19.28■□□□□ 0.68
SOX2-OT-237ENST00000625581 C4BP0C0L5 1744 aa19.28■□□□□ 0.68
SOX2-OT-237ENST00000625581 PSDA5PKW4 1024 aaPredicted RBP19.27■□□□□ 0.68
SOX2-OT-237ENST00000625581 GNAT3A8MTJ3 354 aa19.27■□□□□ 0.68
SOX2-OT-237ENST00000625581 KCNQ4P56696 695 aa19.27■□□□□ 0.68
SOX2-OT-237ENST00000625581 SMARCC1Q92922 1105 aaPredicted RBP19.27■□□□□ 0.68
SOX2-OT-237ENST00000625581 SLC52A2Q9HAB3 445 aa19.27■□□□□ 0.68
SOX2-OT-237ENST00000625581 KCPQ6ZWJ8 1503 aa19.26■□□□□ 0.67
SOX2-OT-237ENST00000625581 R3HDM1Q15032 1099 aaKnown RBP19.26■□□□□ 0.67
SOX2-OT-237ENST00000625581 NFATC2IPQ8NCF5 419 aa19.26■□□□□ 0.67
SOX2-OT-237ENST00000625581 IL17REQ8NFR9 667 aa19.26■□□□□ 0.67
SOX2-OT-237ENST00000625581 CCNL1Q9UK58 526 aaPredicted RBP19.26■□□□□ 0.67
SOX2-OT-237ENST00000625581 UBR3Q6ZT12 1888 aa19.24■□□□□ 0.67
SOX2-OT-237ENST00000625581 WDR43Q15061 677 aaKnown RBP eCLIP19.24■□□□□ 0.67
SOX2-OT-237ENST00000625581 ZNF827Q17R98 1081 aa19.24■□□□□ 0.67
SOX2-OT-237ENST00000625581 NBPF14Q5TI25 921 aa19.24■□□□□ 0.67
SOX2-OT-237ENST00000625581 AKT1S1Q96B36 256 aa19.23■□□□□ 0.67
SOX2-OT-237ENST00000625581 ADAMTS8Q9UP79 889 aa19.23■□□□□ 0.67
SOX2-OT-237ENST00000625581 MAPK8IP3Q9UPT6 1336 aa19.23■□□□□ 0.67
SOX2-OT-237ENST00000625581 LRP5O75197 1615 aa19.22■□□□□ 0.67
SOX2-OT-237ENST00000625581 LOC102724428A0A0B4J2F2 783 aa19.22■□□□□ 0.67
SOX2-OT-237ENST00000625581 SIK1P57059 783 aa19.22■□□□□ 0.67
SOX2-OT-237ENST00000625581 NFE2L2Q16236 605 aa19.22■□□□□ 0.67
SOX2-OT-237ENST00000625581 SLC4A9Q96Q91 983 aa19.22■□□□□ 0.67
SOX2-OT-237ENST00000625581 PNNQ9H307 717 aaKnown RBP19.22■□□□□ 0.67
SOX2-OT-237ENST00000625581 KDM3BQ7LBC6 1761 aa19.21■□□□□ 0.67
SOX2-OT-237ENST00000625581 SLC15A2Q16348 729 aa19.21■□□□□ 0.67
SOX2-OT-237ENST00000625581 CCDC146Q8IYE0 955 aa19.21■□□□□ 0.67
SOX2-OT-237ENST00000625581 HTATSF1O43719 755 aaKnown RBP19.2■□□□□ 0.66
SOX2-OT-237ENST00000625581 NEFMP07197 916 aa19.2■□□□□ 0.66
SOX2-OT-237ENST00000625581 ITPK1Q13572 414 aa19.2■□□□□ 0.66
SOX2-OT-237ENST00000625581 MCM10Q7L590 875 aa19.2■□□□□ 0.66
SOX2-OT-237ENST00000625581 STK32BQ9NY57 414 aa19.2■□□□□ 0.66
SOX2-OT-237ENST00000625581 MYH14Q7Z406 1995 aaKnown RBP19.19■□□□□ 0.66
SOX2-OT-237ENST00000625581 DCTN1Q14203 1278 aa19.19■□□□□ 0.66
SOX2-OT-237ENST00000625581 SLC39A6Q13433 755 aa19.18■□□□□ 0.66
SOX2-OT-237ENST00000625581 LINC00116Q8NCU8 138 aa19.18■□□□□ 0.66
SOX2-OT-237ENST00000625581 RUNDC1Q96C34 613 aa19.18■□□□□ 0.66
SOX2-OT-237ENST00000625581 MRS2Q9HD23 443 aa19.18■□□□□ 0.66
SOX2-OT-237ENST00000625581 COL24A1Q17RW2 1714 aa19.17■□□□□ 0.66
SOX2-OT-237ENST00000625581 TEFQ10587 303 aa19.17■□□□□ 0.66
SOX2-OT-237ENST00000625581 PNISRQ8TF01 805 aaKnown RBP19.17■□□□□ 0.66
SOX2-OT-237ENST00000625581 RTF1Q92541 710 aaKnown RBP19.17■□□□□ 0.66
SOX2-OT-237ENST00000625581 PDGFDQ9GZP0 370 aaPredicted RBP19.17■□□□□ 0.66
SOX2-OT-237ENST00000625581 PTCD1O75127 700 aaKnown RBP19.16■□□□□ 0.66
SOX2-OT-237ENST00000625581 ATP6V1AP38606 617 aa19.16■□□□□ 0.66
SOX2-OT-237ENST00000625581 TMPOP42166 694 aaKnown RBP19.16■□□□□ 0.66
SOX2-OT-237ENST00000625581 RBM42Q9BTD8 480 aaKnown RBP19.16■□□□□ 0.66
SOX2-OT-237ENST00000625581 PNPLA7Q6ZV29 1317 aa19.15■□□□□ 0.66
SOX2-OT-237ENST00000625581 C4AP0C0L4 1744 aa19.14■□□□□ 0.66
SOX2-OT-237ENST00000625581 AMIGO3Q86WK7 504 aa19.14■□□□□ 0.65
SOX2-OT-237ENST00000625581 THUMPD2Q9BTF0 503 aaKnown RBP19.14■□□□□ 0.65
SOX2-OT-237ENST00000625581 RRP7AQ9Y3A4 280 aaKnown RBP19.14■□□□□ 0.65
SOX2-OT-237ENST00000625581 RIPK4P57078 832 aa19.13■□□□□ 0.65
SOX2-OT-237ENST00000625581 ZNF790Q6PG37 636 aa19.13■□□□□ 0.65
SOX2-OT-237ENST00000625581 LAMB4A4D0S4 1761 aa19.13■□□□□ 0.65
SOX2-OT-237ENST00000625581 CNTNAP4Q9C0A0 1308 aa19.11■□□□□ 0.65
SOX2-OT-237ENST00000625581 BTBD11A6QL63 1104 aa19.11■□□□□ 0.65
SOX2-OT-237ENST00000625581 KCNQ3O43525 872 aa19.11■□□□□ 0.65
SOX2-OT-237ENST00000625581 TFCP2L1Q9NZI6 479 aa19.11■□□□□ 0.65
SOX2-OT-237ENST00000625581 TRIM35Q9UPQ4 493 aa19.11■□□□□ 0.65
SOX2-OT-237ENST00000625581 ZNF496Q96IT1 587 aaPredicted RBP19.1■□□□□ 0.65
SOX2-OT-237ENST00000625581 HEG1Q9ULI3 1381 aa19.09■□□□□ 0.65
SOX2-OT-237ENST00000625581 APAF1O14727 1248 aa19.09■□□□□ 0.65
SOX2-OT-237ENST00000625581 HMGB2P26583 209 aaKnown RBP19.09■□□□□ 0.65
SOX2-OT-237ENST00000625581 LMOD3Q0VAK6 560 aa19.09■□□□□ 0.65
SOX2-OT-237ENST00000625581 DNAJC10Q8IXB1 793 aa19.09■□□□□ 0.65
SOX2-OT-237ENST00000625581 TTC5Q8N0Z6 440 aa19.09■□□□□ 0.65
SOX2-OT-237ENST00000625581 AK7Q96M32 723 aa19.09■□□□□ 0.65
SOX2-OT-237ENST00000625581 TAF7Q15545 349 aaPredicted RBP19.08■□□□□ 0.64
SOX2-OT-237ENST00000625581 NEUROD2Q15784 382 aa19.08■□□□□ 0.64
SOX2-OT-237ENST00000625581 VSIG10Q8N0Z9 540 aa19.08■□□□□ 0.64
SOX2-OT-237ENST00000625581 RC3H1Q5TC82 1133 aaKnown RBP19.07■□□□□ 0.64
SOX2-OT-237ENST00000625581 SMIM5Q71RC9 77 aa19.07■□□□□ 0.64
SOX2-OT-237ENST00000625581 COL23A1Q86Y22 540 aaPredicted RBP19.07■□□□□ 0.64
SOX2-OT-237ENST00000625581 GNPATO15228 680 aa19.06■□□□□ 0.64
SOX2-OT-237ENST00000625581 ZBTB7AO95365 584 aa19.06■□□□□ 0.64
SOX2-OT-237ENST00000625581 SSFA2P28290 1259 aa19.06■□□□□ 0.64
SOX2-OT-237ENST00000625581 CRKLP46109 303 aaKnown RBP19.06■□□□□ 0.64
SOX2-OT-237ENST00000625581 MIS18AQ9NYP9 233 aa19.06■□□□□ 0.64
SOX2-OT-237ENST00000625581 CYP19A1P11511 503 aaPredicted RBP19.05■□□□□ 0.64
SOX2-OT-237ENST00000625581 DIEXFQ68CQ4 756 aaKnown RBP19.05■□□□□ 0.64
SOX2-OT-237ENST00000625581 FMNL2Q96PY5 1086 aa19.05■□□□□ 0.64
SOX2-OT-237ENST00000625581 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.04■□□□□ 0.64
SOX2-OT-237ENST00000625581 PHF14O94880 888 aa19.04■□□□□ 0.64
SOX2-OT-237ENST00000625581 INTS5Q6P9B9 1019 aaKnown RBP19.04■□□□□ 0.64
SOX2-OT-237ENST00000625581 MTFR1LQ9H019 292 aa19.04■□□□□ 0.64
SOX2-OT-237ENST00000625581 SGIP1Q9BQI5 828 aa19.03■□□□□ 0.64
SOX2-OT-237ENST00000625581 PRAMEF22A3QJZ6 481 aa19.02■□□□□ 0.64
SOX2-OT-237ENST00000625581 RPS6KA4O75676 772 aa19.02■□□□□ 0.64
SOX2-OT-237ENST00000625581 PTGER2P43116 358 aa19.02■□□□□ 0.64
SOX2-OT-237ENST00000625581 FLAD1Q8NFF5 587 aa19.02■□□□□ 0.64
SOX2-OT-237ENST00000625581 SLC16A10Q8TF71 515 aa19.02■□□□□ 0.64
SOX2-OT-237ENST00000625581 SPON1Q9HCB6 807 aa19.02■□□□□ 0.64
SOX2-OT-237ENST00000625581 CCDC87Q9NVE4 849 aa19.02■□□□□ 0.64
SOX2-OT-237ENST00000625581 CCER2I3L3R5 266 aa19.01■□□□□ 0.63
SOX2-OT-237ENST00000625581 FAM9BQ8IZU0 186 aa19.01■□□□□ 0.63
SOX2-OT-237ENST00000625581 ZBTB1Q9Y2K1 713 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms