RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 ASAP1Q9ULH1 1129 aa26.89■■□□□ 1.9
R3HCC1-210ENST00000625275 AMOTQ4VCS5 1084 aa26.88■■□□□ 1.89
R3HCC1-210ENST00000625275 ZNF530Q6P9A1 599 aaPredicted RBP26.88■■□□□ 1.89
R3HCC1-210ENST00000625275 DCAF5Q96JK2 942 aa26.87■■□□□ 1.89
R3HCC1-210ENST00000625275 IL13P35225 146 aa26.87■■□□□ 1.89
R3HCC1-210ENST00000625275 ERVV-2B6SEH9 535 aa26.86■■□□□ 1.89
R3HCC1-210ENST00000625275 MSL1Q68DK7 614 aa26.86■■□□□ 1.89
R3HCC1-210ENST00000625275 SULT6B1Q6IMI4 303 aa26.86■■□□□ 1.89
R3HCC1-210ENST00000625275 ATG3Q9NT62 314 aa26.86■■□□□ 1.89
R3HCC1-210ENST00000625275 LINC00116Q8NCU8 138 aa26.85■■□□□ 1.89
R3HCC1-210ENST00000625275 MTHFSP49914 203 aa26.83■■□□□ 1.89
R3HCC1-210ENST00000625275 AMIGO3Q86WK7 504 aa26.83■■□□□ 1.89
R3HCC1-210ENST00000625275 MYH14Q7Z406 1995 aaKnown RBP26.83■■□□□ 1.89
R3HCC1-210ENST00000625275 ATP6V1AP38606 617 aa26.82■■□□□ 1.88
R3HCC1-210ENST00000625275 ITPK1Q13572 414 aa26.82■■□□□ 1.88
R3HCC1-210ENST00000625275 C1orf141Q5JVX7 400 aa26.82■■□□□ 1.88
R3HCC1-210ENST00000625275 PHF14O94880 888 aa26.81■■□□□ 1.88
R3HCC1-210ENST00000625275 DIEXFQ68CQ4 756 aaKnown RBP26.81■■□□□ 1.88
R3HCC1-210ENST00000625275 PRKRIP1Q9H875 184 aaPredicted RBP26.81■■□□□ 1.88
R3HCC1-210ENST00000625275 CICQ96RK0 1608 aaPredicted RBP26.81■■□□□ 1.88
R3HCC1-210ENST00000625275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.81■■□□□ 1.88
R3HCC1-210ENST00000625275 SSFA2P28290 1259 aa26.81■■□□□ 1.88
R3HCC1-210ENST00000625275 RALBP1Q15311 655 aa26.8■■□□□ 1.88
R3HCC1-210ENST00000625275 C4AP0C0L4 1744 aa26.79■■□□□ 1.88
R3HCC1-210ENST00000625275 CABP4P57796 275 aa26.79■■□□□ 1.88
R3HCC1-210ENST00000625275 NLGN2Q8NFZ4 835 aa26.79■■□□□ 1.88
R3HCC1-210ENST00000625275 TJP1Q07157 1748 aa26.78■■□□□ 1.88
R3HCC1-210ENST00000625275 GNPATO15228 680 aa26.78■■□□□ 1.88
R3HCC1-210ENST00000625275 UTRNP46939 3433 aa26.78■■□□□ 1.88
R3HCC1-210ENST00000625275 GPR162Q16538 588 aa26.77■■□□□ 1.88
R3HCC1-210ENST00000625275 SMIM5Q71RC9 77 aa26.77■■□□□ 1.88
R3HCC1-210ENST00000625275 ADAMTS7Q9UKP4 1686 aa26.77■■□□□ 1.88
R3HCC1-210ENST00000625275 COL3A1P02461 1466 aaPredicted RBP26.76■■□□□ 1.88
R3HCC1-210ENST00000625275 ANP32CO43423 234 aa26.76■■□□□ 1.87
R3HCC1-210ENST00000625275 PPP2R1AP30153 589 aa26.75■■□□□ 1.87
R3HCC1-210ENST00000625275 RBM42Q9BTD8 480 aaKnown RBP26.75■■□□□ 1.87
R3HCC1-210ENST00000625275 SLC4A9Q96Q91 983 aa26.74■■□□□ 1.87
R3HCC1-210ENST00000625275 MRC1P22897 1456 aa26.73■■□□□ 1.87
R3HCC1-210ENST00000625275 KIF13BQ9NQT8 1826 aa26.73■■□□□ 1.87
R3HCC1-210ENST00000625275 DIAPH1O60610 1272 aaKnown RBP26.73■■□□□ 1.87
R3HCC1-210ENST00000625275 HMOX1P09601 288 aa26.73■■□□□ 1.87
R3HCC1-210ENST00000625275 PELP1Q8IZL8 1130 aaKnown RBP26.73■■□□□ 1.87
R3HCC1-210ENST00000625275 AKAP4Q5JQC9 854 aa26.72■■□□□ 1.87
R3HCC1-210ENST00000625275 MYBBP1AQ9BQG0 1328 aaKnown RBP26.72■■□□□ 1.87
R3HCC1-210ENST00000625275 NFATC2IPQ8NCF5 419 aa26.71■■□□□ 1.87
R3HCC1-210ENST00000625275 CD2APQ9Y5K6 639 aa26.71■■□□□ 1.87
R3HCC1-210ENST00000625275 CNTNAP4Q9C0A0 1308 aa26.7■■□□□ 1.86
R3HCC1-210ENST00000625275 RC3H1Q5TC82 1133 aaKnown RBP26.68■■□□□ 1.86
R3HCC1-210ENST00000625275 RTCBQ9Y3I0 505 aaKnown RBP26.68■■□□□ 1.86
R3HCC1-210ENST00000625275 UBR2Q8IWV8 1755 aa26.68■■□□□ 1.86
R3HCC1-210ENST00000625275 GOLGB1Q14789 3259 aaKnown RBP26.68■■□□□ 1.86
R3HCC1-210ENST00000625275 PTCD1O75127 700 aaKnown RBP26.67■■□□□ 1.86
R3HCC1-210ENST00000625275 SIPA1L3O60292 1781 aaPredicted RBP26.66■■□□□ 1.86
R3HCC1-210ENST00000625275 ZNF784Q8NCA9 323 aaPredicted RBP26.66■■□□□ 1.86
R3HCC1-210ENST00000625275 YBX3P16989 372 aaKnown RBP eCLIP26.65■■□□□ 1.86
R3HCC1-210ENST00000625275 ADRA2BP18089 450 aa26.65■■□□□ 1.86
R3HCC1-210ENST00000625275 KIAA1551Q9HCM1 1747 aa26.65■■□□□ 1.86
R3HCC1-210ENST00000625275 TRAPPC3LQ5T215 181 aa26.64■■□□□ 1.86
R3HCC1-210ENST00000625275 SLC52A2Q9HAB3 445 aa26.64■■□□□ 1.86
R3HCC1-210ENST00000625275 MTHFSDQ2M296 383 aaKnown RBP26.63■■□□□ 1.85
R3HCC1-210ENST00000625275 N4BP2Q86UW6 1770 aaPredicted RBP26.63■■□□□ 1.85
R3HCC1-210ENST00000625275 RNMTO43148 476 aaKnown RBP26.62■■□□□ 1.85
R3HCC1-210ENST00000625275 RPS6KA4O75676 772 aa26.62■■□□□ 1.85
R3HCC1-210ENST00000625275 LGR6Q9HBX8 967 aa26.62■■□□□ 1.85
R3HCC1-210ENST00000625275 KCPQ6ZWJ8 1503 aa26.62■■□□□ 1.85
R3HCC1-210ENST00000625275 GRIN3BO60391 1043 aa26.62■■□□□ 1.85
R3HCC1-210ENST00000625275 U2SURPO15042 1029 aaKnown RBP26.61■■□□□ 1.85
R3HCC1-210ENST00000625275 MMP10P09238 476 aa26.6■■□□□ 1.85
R3HCC1-210ENST00000625275 BRCA1P38398 1863 aaKnown RBP26.6■■□□□ 1.85
R3HCC1-210ENST00000625275 CRKLP46109 303 aaKnown RBP26.6■■□□□ 1.85
R3HCC1-210ENST00000625275 ARHGEF1Q92888 912 aaKnown RBP26.6■■□□□ 1.85
R3HCC1-210ENST00000625275 RFC4P35249 363 aa26.58■■□□□ 1.85
R3HCC1-210ENST00000625275 NLGN1Q8N2Q7 840 aa26.58■■□□□ 1.85
R3HCC1-210ENST00000625275 CFAP53Q96M91 514 aa26.58■■□□□ 1.85
R3HCC1-210ENST00000625275 MIER1Q8N108 512 aa26.56■■□□□ 1.84
R3HCC1-210ENST00000625275 GYS1P13807 737 aa26.55■■□□□ 1.84
R3HCC1-210ENST00000625275 SLC39A6Q13433 755 aa26.55■■□□□ 1.84
R3HCC1-210ENST00000625275 CCDC184Q52MB2 194 aa26.55■■□□□ 1.84
R3HCC1-210ENST00000625275 C10orf71Q711Q0 1435 aa26.54■■□□□ 1.84
R3HCC1-210ENST00000625275 DNAJC10Q8IXB1 793 aa26.54■■□□□ 1.84
R3HCC1-210ENST00000625275 GAS2L2Q8NHY3 880 aa26.54■■□□□ 1.84
R3HCC1-210ENST00000625275 PXDNLA1KZ92 1463 aa26.53■■□□□ 1.84
R3HCC1-210ENST00000625275 INTS5Q6P9B9 1019 aaKnown RBP26.52■■□□□ 1.84
R3HCC1-210ENST00000625275 CCDC87Q9NVE4 849 aa26.51■■□□□ 1.83
R3HCC1-210ENST00000625275 AFDNP55196 1824 aaKnown RBP26.51■■□□□ 1.83
R3HCC1-210ENST00000625275 USP42Q9H9J4 1324 aaKnown RBP26.51■■□□□ 1.83
R3HCC1-210ENST00000625275 ARFGEF1Q9Y6D6 1849 aa26.5■■□□□ 1.83
R3HCC1-210ENST00000625275 GNAT3A8MTJ3 354 aa26.49■■□□□ 1.83
R3HCC1-210ENST00000625275 SRP68Q9UHB9 627 aaKnown RBP26.49■■□□□ 1.83
R3HCC1-210ENST00000625275 WWC3Q9ULE0 1092 aa26.49■■□□□ 1.83
R3HCC1-210ENST00000625275 DLG5Q8TDM6 1919 aa26.48■■□□□ 1.83
R3HCC1-210ENST00000625275 CYP19A1P11511 503 aaPredicted RBP26.48■■□□□ 1.83
R3HCC1-210ENST00000625275 PRKAR2BP31323 418 aa26.48■■□□□ 1.83
R3HCC1-210ENST00000625275 RSPH6AQ9H0K4 717 aa26.48■■□□□ 1.83
R3HCC1-210ENST00000625275 MRS2Q9HD23 443 aa26.48■■□□□ 1.83
R3HCC1-210ENST00000625275 NUDCQ9Y266 331 aa26.48■■□□□ 1.83
R3HCC1-210ENST00000625275 PARP3Q9Y6F1 533 aa26.48■■□□□ 1.83
R3HCC1-210ENST00000625275 SOS1Q07889 1333 aaPredicted RBP26.48■■□□□ 1.83
R3HCC1-210ENST00000625275 VSIG10Q8N0Z9 540 aa26.47■■□□□ 1.83
R3HCC1-210ENST00000625275 TEFQ10587 303 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms