RNA–Protein interactions for RNA: ENST00000625044.1

PCDHB16-202, Transcript of protocadherin beta 16, humanhuman

TSL 2

Gene PCDHB16, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-202ENST00000625044 SLC52A2Q9HAB3 445 aa26.88■■□□□ 1.89
PCDHB16-202ENST00000625044 TFCP2L1Q9NZI6 479 aa26.88■■□□□ 1.89
PCDHB16-202ENST00000625044 ADAMTS7Q9UKP4 1686 aa26.88■■□□□ 1.89
PCDHB16-202ENST00000625044 C5P01031 1676 aa26.87■■□□□ 1.89
PCDHB16-202ENST00000625044 MRC1P22897 1456 aa26.87■■□□□ 1.89
PCDHB16-202ENST00000625044 GNAT3A8MTJ3 354 aa26.86■■□□□ 1.89
PCDHB16-202ENST00000625044 SPON1Q9HCB6 807 aa26.86■■□□□ 1.89
PCDHB16-202ENST00000625044 ZBTB7AO95365 584 aa26.85■■□□□ 1.89
PCDHB16-202ENST00000625044 HMGB2P26583 209 aaKnown RBP26.85■■□□□ 1.89
PCDHB16-202ENST00000625044 ITPK1Q13572 414 aa26.85■■□□□ 1.89
PCDHB16-202ENST00000625044 PNPLA7Q6ZV29 1317 aa26.85■■□□□ 1.89
PCDHB16-202ENST00000625044 TAF1LQ8IZX4 1826 aa26.84■■□□□ 1.89
PCDHB16-202ENST00000625044 SLC4A9Q96Q91 983 aa26.84■■□□□ 1.89
PCDHB16-202ENST00000625044 ATP6V1AP38606 617 aa26.83■■□□□ 1.89
PCDHB16-202ENST00000625044 LINC00116Q8NCU8 138 aa26.83■■□□□ 1.89
PCDHB16-202ENST00000625044 IL17REQ8NFR9 667 aa26.83■■□□□ 1.89
PCDHB16-202ENST00000625044 RBM42Q9BTD8 480 aaKnown RBP26.82■■□□□ 1.88
PCDHB16-202ENST00000625044 QSER1Q2KHR3 1735 aa26.82■■□□□ 1.88
PCDHB16-202ENST00000625044 TUBGCP6Q96RT7 1819 aa26.81■■□□□ 1.88
PCDHB16-202ENST00000625044 PLEKHF1Q96S99 279 aa26.81■■□□□ 1.88
PCDHB16-202ENST00000625044 C4BP0C0L5 1744 aa26.81■■□□□ 1.88
PCDHB16-202ENST00000625044 PTCD1O75127 700 aaKnown RBP26.8■■□□□ 1.88
PCDHB16-202ENST00000625044 MTFR1LQ9H019 292 aa26.8■■□□□ 1.88
PCDHB16-202ENST00000625044 ATF5Q9Y2D1 282 aaPredicted RBP26.8■■□□□ 1.88
PCDHB16-202ENST00000625044 VIRMAQ69YN4 1812 aaKnown RBP26.79■■□□□ 1.88
PCDHB16-202ENST00000625044 AMIGO3Q86WK7 504 aa26.78■■□□□ 1.88
PCDHB16-202ENST00000625044 AK7Q96M32 723 aa26.78■■□□□ 1.88
PCDHB16-202ENST00000625044 CEMIPQ8WUJ3 1361 aa26.78■■□□□ 1.88
PCDHB16-202ENST00000625044 ZNF831Q5JPB2 1677 aa26.78■■□□□ 1.88
PCDHB16-202ENST00000625044 PTGER2P43116 358 aa26.77■■□□□ 1.88
PCDHB16-202ENST00000625044 SLC39A6Q13433 755 aa26.77■■□□□ 1.88
PCDHB16-202ENST00000625044 COL23A1Q86Y22 540 aaPredicted RBP26.77■■□□□ 1.88
PCDHB16-202ENST00000625044 SLC16A10Q8TF71 515 aa26.76■■□□□ 1.87
PCDHB16-202ENST00000625044 NEFMP07197 916 aa26.75■■□□□ 1.87
PCDHB16-202ENST00000625044 TEFQ10587 303 aa26.75■■□□□ 1.87
PCDHB16-202ENST00000625044 SGIP1Q9BQI5 828 aa26.74■■□□□ 1.87
PCDHB16-202ENST00000625044 PNNQ9H307 717 aaKnown RBP26.74■■□□□ 1.87
PCDHB16-202ENST00000625044 SMIM5Q71RC9 77 aa26.73■■□□□ 1.87
PCDHB16-202ENST00000625044 KCPQ6ZWJ8 1503 aa26.72■■□□□ 1.87
PCDHB16-202ENST00000625044 HTATSF1O43719 755 aaKnown RBP26.72■■□□□ 1.87
PCDHB16-202ENST00000625044 MCM10Q7L590 875 aa26.72■■□□□ 1.87
PCDHB16-202ENST00000625044 FLAD1Q8NFF5 587 aa26.72■■□□□ 1.87
PCDHB16-202ENST00000625044 RTF1Q92541 710 aaKnown RBP26.72■■□□□ 1.87
PCDHB16-202ENST00000625044 GNPATO15228 680 aa26.71■■□□□ 1.87
PCDHB16-202ENST00000625044 MSH5O43196 834 aa26.71■■□□□ 1.87
PCDHB16-202ENST00000625044 PPP1R1BQ9UD71 204 aaPredicted RBP26.71■■□□□ 1.87
PCDHB16-202ENST00000625044 UBR3Q6ZT12 1888 aa26.7■■□□□ 1.87
PCDHB16-202ENST00000625044 MAPK8IP3Q9UPT6 1336 aa26.7■■□□□ 1.87
PCDHB16-202ENST00000625044 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.7■■□□□ 1.86
PCDHB16-202ENST00000625044 PHF14O94880 888 aa26.7■■□□□ 1.86
PCDHB16-202ENST00000625044 SSFA2P28290 1259 aa26.7■■□□□ 1.86
PCDHB16-202ENST00000625044 DCTN1Q14203 1278 aa26.7■■□□□ 1.86
PCDHB16-202ENST00000625044 NFE2L2Q16236 605 aa26.7■■□□□ 1.86
PCDHB16-202ENST00000625044 RC3H1Q5TC82 1133 aaKnown RBP26.7■■□□□ 1.86
PCDHB16-202ENST00000625044 SIPA1L3O60292 1781 aaPredicted RBP26.7■■□□□ 1.86
PCDHB16-202ENST00000625044 COL5A3P25940 1745 aaPredicted RBP26.7■■□□□ 1.86
PCDHB16-202ENST00000625044 CNTNAP4Q9C0A0 1308 aa26.69■■□□□ 1.86
PCDHB16-202ENST00000625044 CICQ96RK0 1608 aaPredicted RBP26.68■■□□□ 1.86
PCDHB16-202ENST00000625044 WDR43Q15061 677 aaKnown RBP eCLIP26.68■■□□□ 1.86
PCDHB16-202ENST00000625044 TJP1Q07157 1748 aa26.68■■□□□ 1.86
PCDHB16-202ENST00000625044 ZNF790Q6PG37 636 aa26.67■■□□□ 1.86
PCDHB16-202ENST00000625044 TTC5Q8N0Z6 440 aa26.67■■□□□ 1.86
PCDHB16-202ENST00000625044 UBR2Q8IWV8 1755 aa26.66■■□□□ 1.86
PCDHB16-202ENST00000625044 CRKLP46109 303 aaKnown RBP26.66■■□□□ 1.86
PCDHB16-202ENST00000625044 DNAJC10Q8IXB1 793 aa26.66■■□□□ 1.86
PCDHB16-202ENST00000625044 ADAMTS8Q9UP79 889 aa26.66■■□□□ 1.86
PCDHB16-202ENST00000625044 BTBD11A6QL63 1104 aa26.65■■□□□ 1.86
PCDHB16-202ENST00000625044 VSIG10Q8N0Z9 540 aa26.65■■□□□ 1.86
PCDHB16-202ENST00000625044 ZNF496Q96IT1 587 aaPredicted RBP26.65■■□□□ 1.86
PCDHB16-202ENST00000625044 RTCBQ9Y3I0 505 aaKnown RBP26.65■■□□□ 1.86
PCDHB16-202ENST00000625044 COL24A1Q17RW2 1714 aa26.64■■□□□ 1.85
PCDHB16-202ENST00000625044 KCNQ3O43525 872 aa26.63■■□□□ 1.85
PCDHB16-202ENST00000625044 RPS6KA4O75676 772 aa26.63■■□□□ 1.85
PCDHB16-202ENST00000625044 MSL1Q68DK7 614 aa26.63■■□□□ 1.85
PCDHB16-202ENST00000625044 CCDC146Q8IYE0 955 aa26.63■■□□□ 1.85
PCDHB16-202ENST00000625044 MYH14Q7Z406 1995 aaKnown RBP26.63■■□□□ 1.85
PCDHB16-202ENST00000625044 DLG5Q8TDM6 1919 aa26.63■■□□□ 1.85
PCDHB16-202ENST00000625044 CYP19A1P11511 503 aaPredicted RBP26.62■■□□□ 1.85
PCDHB16-202ENST00000625044 INTS5Q6P9B9 1019 aaKnown RBP26.62■■□□□ 1.85
PCDHB16-202ENST00000625044 ARXQ96QS3 562 aa26.62■■□□□ 1.85
PCDHB16-202ENST00000625044 ANP32CO43423 234 aa26.61■■□□□ 1.85
PCDHB16-202ENST00000625044 POLD1P28340 1107 aa26.61■■□□□ 1.85
PCDHB16-202ENST00000625044 CCDC184Q52MB2 194 aa26.61■■□□□ 1.85
PCDHB16-202ENST00000625044 HEG1Q9ULI3 1381 aa26.6■■□□□ 1.85
PCDHB16-202ENST00000625044 ADRA2BP18089 450 aa26.6■■□□□ 1.85
PCDHB16-202ENST00000625044 TRAPPC3LQ5T215 181 aa26.6■■□□□ 1.85
PCDHB16-202ENST00000625044 THUMPD2Q9BTF0 503 aaKnown RBP26.6■■□□□ 1.85
PCDHB16-202ENST00000625044 TMPOP42166 694 aaKnown RBP26.59■■□□□ 1.85
PCDHB16-202ENST00000625044 TAF7Q15545 349 aaPredicted RBP26.59■■□□□ 1.85
PCDHB16-202ENST00000625044 ARHGEF1Q92888 912 aaKnown RBP26.59■■□□□ 1.85
PCDHB16-202ENST00000625044 RUNDC1Q96C34 613 aa26.59■■□□□ 1.85
PCDHB16-202ENST00000625044 FMNL2Q96PY5 1086 aa26.59■■□□□ 1.85
PCDHB16-202ENST00000625044 CCDC87Q9NVE4 849 aa26.59■■□□□ 1.85
PCDHB16-202ENST00000625044 RIPK4P57078 832 aa26.58■■□□□ 1.85
PCDHB16-202ENST00000625044 FHDC1Q9C0D6 1143 aaPredicted RBP26.58■■□□□ 1.85
PCDHB16-202ENST00000625044 RRP7AQ9Y3A4 280 aaKnown RBP26.57■■□□□ 1.84
PCDHB16-202ENST00000625044 MIS18AQ9NYP9 233 aa26.56■■□□□ 1.84
PCDHB16-202ENST00000625044 STARD3NLO95772 234 aa26.54■■□□□ 1.84
PCDHB16-202ENST00000625044 RFC4P35249 363 aa26.54■■□□□ 1.84
PCDHB16-202ENST00000625044 TEX13AQ9BXU3 409 aaPredicted RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms