RNA–Protein interactions for RNA: ENST00000624994.1

PCDHB2-204, Transcript of protocadherin beta 2, humanhuman

TSL 3

Gene PCDHB2, Length 162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-204ENST00000624994 SCN11AQ9UI33 1791 aa13.24□□□□□ -0.29
PCDHB2-204ENST00000624994 RGS12O14924 1447 aa13.23□□□□□ -0.29
PCDHB2-204ENST00000624994 TRMT2AQ8IZ69 625 aaKnown RBP13.23□□□□□ -0.29
PCDHB2-204ENST00000624994 SYTL4Q96C24 671 aaPredicted RBP13.22□□□□□ -0.29
PCDHB2-204ENST00000624994 TSPYL4Q9UJ04 414 aa13.22□□□□□ -0.29
PCDHB2-204ENST00000624994 PIGBQ92521 554 aa13.21□□□□□ -0.29
PCDHB2-204ENST00000624994 CDCA7LQ96GN5 454 aa13.21□□□□□ -0.29
PCDHB2-204ENST00000624994 ACSBG1Q96GR2 724 aa13.21□□□□□ -0.29
PCDHB2-204ENST00000624994 BCL11BQ9C0K0 894 aaPredicted RBP13.21□□□□□ -0.29
PCDHB2-204ENST00000624994 MBIPQ9NS73 344 aa13.21□□□□□ -0.29
PCDHB2-204ENST00000624994 MRC1P22897 1456 aa13.21□□□□□ -0.3
PCDHB2-204ENST00000624994 FAM182BQ5T319 152 aa13.2□□□□□ -0.3
PCDHB2-204ENST00000624994 ZNF790Q6PG37 636 aa13.2□□□□□ -0.3
PCDHB2-204ENST00000624994 TTC5Q8N0Z6 440 aa13.2□□□□□ -0.3
PCDHB2-204ENST00000624994 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
PCDHB2-204ENST00000624994 MIS18AQ9NYP9 233 aa13.2□□□□□ -0.3
PCDHB2-204ENST00000624994 BRWD3Q6RI45 1802 aa13.2□□□□□ -0.3
PCDHB2-204ENST00000624994 KCNQ2O43526 872 aa13.19□□□□□ -0.3
PCDHB2-204ENST00000624994 DUSP27Q5VZP5 1158 aa13.19□□□□□ -0.3
PCDHB2-204ENST00000624994 SMARCC1Q92922 1105 aaPredicted RBP13.19□□□□□ -0.3
PCDHB2-204ENST00000624994 CHMP4AQ9BY43 222 aa13.19□□□□□ -0.3
PCDHB2-204ENST00000624994 KAT6BQ8WYB5 2073 aa13.19□□□□□ -0.3
PCDHB2-204ENST00000624994 VIRMAQ69YN4 1812 aaKnown RBP13.18□□□□□ -0.3
PCDHB2-204ENST00000624994 FANCIQ9NVI1 1328 aa13.18□□□□□ -0.3
PCDHB2-204ENST00000624994 SOS1Q07889 1333 aaPredicted RBP13.17□□□□□ -0.3
PCDHB2-204ENST00000624994 CT47B1P0C2W7 299 aaPredicted RBP13.17□□□□□ -0.3
PCDHB2-204ENST00000624994 EIF4A1P60842 406 aaKnown RBP13.17□□□□□ -0.3
PCDHB2-204ENST00000624994 TSR2Q969E8 191 aaKnown RBP13.17□□□□□ -0.3
PCDHB2-204ENST00000624994 FMNL2Q96PY5 1086 aa13.17□□□□□ -0.3
PCDHB2-204ENST00000624994 ATG3Q9NT62 314 aa13.17□□□□□ -0.3
PCDHB2-204ENST00000624994 SIPA1L3O60292 1781 aaPredicted RBP13.17□□□□□ -0.3
PCDHB2-204ENST00000624994 ITGB4P16144 1822 aa13.16□□□□□ -0.3
PCDHB2-204ENST00000624994 TRIM37O94972 964 aa13.16□□□□□ -0.3
PCDHB2-204ENST00000624994 HMGB2P26583 209 aaKnown RBP13.16□□□□□ -0.3
PCDHB2-204ENST00000624994 SLC39A6Q13433 755 aa13.16□□□□□ -0.3
PCDHB2-204ENST00000624994 VSIG10Q8N0Z9 540 aa13.16□□□□□ -0.3
PCDHB2-204ENST00000624994 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
PCDHB2-204ENST00000624994 TOGARAM1Q9Y4F4 1720 aa13.16□□□□□ -0.3
PCDHB2-204ENST00000624994 KCNQ3O43525 872 aa13.15□□□□□ -0.3
PCDHB2-204ENST00000624994 HOXB7P09629 217 aa13.15□□□□□ -0.3
PCDHB2-204ENST00000624994 EXOSC9Q06265 439 aaKnown RBP13.15□□□□□ -0.3
PCDHB2-204ENST00000624994 ZNF428Q96B54 188 aa13.15□□□□□ -0.3
PCDHB2-204ENST00000624994 TEX13AQ9BXU3 409 aaPredicted RBP13.15□□□□□ -0.3
PCDHB2-204ENST00000624994 DOT1LQ8TEK3 1739 aa13.15□□□□□ -0.3
PCDHB2-204ENST00000624994 SNRPA1P09661 255 aaKnown RBP13.14□□□□□ -0.31
PCDHB2-204ENST00000624994 CCDC125Q86Z20 511 aa13.14□□□□□ -0.31
PCDHB2-204ENST00000624994 ZNF496Q96IT1 587 aaPredicted RBP13.14□□□□□ -0.31
PCDHB2-204ENST00000624994 NHSQ6T4R5 1651 aa13.14□□□□□ -0.31
PCDHB2-204ENST00000624994 SBF2Q86WG5 1849 aa13.13□□□□□ -0.31
PCDHB2-204ENST00000624994 HEG1Q9ULI3 1381 aa13.13□□□□□ -0.31
PCDHB2-204ENST00000624994 PTCD1O75127 700 aaKnown RBP13.13□□□□□ -0.31
PCDHB2-204ENST00000624994 GIGYF1O75420 1035 aaPredicted RBP13.13□□□□□ -0.31
PCDHB2-204ENST00000624994 CENPBP07199 599 aaPredicted RBP13.13□□□□□ -0.31
PCDHB2-204ENST00000624994 TWISTNBQ3B726 338 aaPredicted RBP13.13□□□□□ -0.31
PCDHB2-204ENST00000624994 C8orf58Q8NAV2 365 aa13.13□□□□□ -0.31
PCDHB2-204ENST00000624994 EP400Q96L91 3159 aa13.13□□□□□ -0.31
PCDHB2-204ENST00000624994 KDM3BQ7LBC6 1761 aa13.12□□□□□ -0.31
PCDHB2-204ENST00000624994 PALLDQ8WX93 1383 aa13.12□□□□□ -0.31
PCDHB2-204ENST00000624994 PLSCR1O15162 318 aa13.12□□□□□ -0.31
PCDHB2-204ENST00000624994 VAMP4O75379 141 aa13.12□□□□□ -0.31
PCDHB2-204ENST00000624994 PTF1AQ7RTS3 328 aa13.12□□□□□ -0.31
PCDHB2-204ENST00000624994 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
PCDHB2-204ENST00000624994 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
PCDHB2-204ENST00000624994 ELL2O00472 640 aaPredicted RBP13.11□□□□□ -0.31
PCDHB2-204ENST00000624994 APBA3O96018 575 aa13.11□□□□□ -0.31
PCDHB2-204ENST00000624994 SIK1P57059 783 aa13.11□□□□□ -0.31
PCDHB2-204ENST00000624994 SF3B2Q13435 895 aaKnown RBP13.11□□□□□ -0.31
PCDHB2-204ENST00000624994 STARD3NLO95772 234 aa13.1□□□□□ -0.31
PCDHB2-204ENST00000624994 SLC27A3Q5K4L6 730 aa13.1□□□□□ -0.31
PCDHB2-204ENST00000624994 TSPYL6Q8N831 410 aa13.1□□□□□ -0.31
PCDHB2-204ENST00000624994 PAPPAQ13219 1627 aa13.1□□□□□ -0.31
PCDHB2-204ENST00000624994 ATP6V1AP38606 617 aa13.09□□□□□ -0.31
PCDHB2-204ENST00000624994 KRT24Q2M2I5 525 aa13.09□□□□□ -0.31
PCDHB2-204ENST00000624994 ALDH1L2Q3SY69 923 aa13.09□□□□□ -0.31
PCDHB2-204ENST00000624994 CCDC30Q5VVM6 783 aa13.09□□□□□ -0.31
PCDHB2-204ENST00000624994 BTAF1O14981 1849 aa13.09□□□□□ -0.31
PCDHB2-204ENST00000624994 KCPQ6ZWJ8 1503 aa13.08□□□□□ -0.31
PCDHB2-204ENST00000624994 UBR2Q8IWV8 1755 aa13.08□□□□□ -0.32
PCDHB2-204ENST00000624994 HDGFL1Q5TGJ6 251 aa13.08□□□□□ -0.32
PCDHB2-204ENST00000624994 USP16Q9Y5T5 823 aa13.08□□□□□ -0.32
PCDHB2-204ENST00000624994 EIF2S2P20042 333 aaKnown RBP13.07□□□□□ -0.32
PCDHB2-204ENST00000624994 SLC4A9Q96Q91 983 aa13.07□□□□□ -0.32
PCDHB2-204ENST00000624994 STK31Q9BXU1 1019 aa13.07□□□□□ -0.32
PCDHB2-204ENST00000624994 CCNL1Q9UK58 526 aaPredicted RBP13.07□□□□□ -0.32
PCDHB2-204ENST00000624994 RCAN3Q9UKA8 241 aa13.07□□□□□ -0.32
PCDHB2-204ENST00000624994 ERBB4Q15303 1308 aa13.07□□□□□ -0.32
PCDHB2-204ENST00000624994 BAG6P46379 1132 aa13.06□□□□□ -0.32
PCDHB2-204ENST00000624994 RARSP54136 660 aaKnown RBP13.06□□□□□ -0.32
PCDHB2-204ENST00000624994 DNAJC10Q8IXB1 793 aa13.06□□□□□ -0.32
PCDHB2-204ENST00000624994 DBF4Q9UBU7 674 aaPredicted RBP13.06□□□□□ -0.32
PCDHB2-204ENST00000624994 ZNF831Q5JPB2 1677 aa13.05□□□□□ -0.32
PCDHB2-204ENST00000624994 PRAMEF22A3QJZ6 481 aa13.05□□□□□ -0.32
PCDHB2-204ENST00000624994 CYP19A1P11511 503 aaPredicted RBP13.05□□□□□ -0.32
PCDHB2-204ENST00000624994 BRPF1P55201 1214 aaPredicted RBP13.05□□□□□ -0.32
PCDHB2-204ENST00000624994 TXNRD1Q16881 649 aa13.05□□□□□ -0.32
PCDHB2-204ENST00000624994 RC3H1Q5TC82 1133 aaKnown RBP13.05□□□□□ -0.32
PCDHB2-204ENST00000624994 DDX21Q9NR30 783 aaKnown RBP eCLIP13.05□□□□□ -0.32
PCDHB2-204ENST00000624994 SLC4A2P04920 1241 aa13.04□□□□□ -0.32
PCDHB2-204ENST00000624994 ITPK1Q13572 414 aa13.04□□□□□ -0.32
PCDHB2-204ENST00000624994 SSH1Q8WYL5 1049 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms