RNA–Protein interactions for RNA: ENST00000624390.1

LINC00963-219, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 472 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-219ENST00000624390 SLC39A6Q13433 755 aa11.08□□□□□ -0.64
LINC00963-219ENST00000624390 IL17REQ8NFR9 667 aa11.08□□□□□ -0.64
LINC00963-219ENST00000624390 AKT1S1Q96B36 256 aa11.08□□□□□ -0.64
LINC00963-219ENST00000624390 AK7Q96M32 723 aa11.08□□□□□ -0.64
LINC00963-219ENST00000624390 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
LINC00963-219ENST00000624390 PKD1L3Q7Z443 1732 aa11.07□□□□□ -0.64
LINC00963-219ENST00000624390 SHANK3Q9BYB0 1731 aa11.07□□□□□ -0.64
LINC00963-219ENST00000624390 MCM10Q7L590 875 aa11.07□□□□□ -0.64
LINC00963-219ENST00000624390 CCDC146Q8IYE0 955 aa11.07□□□□□ -0.64
LINC00963-219ENST00000624390 SPON1Q9HCB6 807 aa11.07□□□□□ -0.64
LINC00963-219ENST00000624390 DOT1LQ8TEK3 1739 aa11.06□□□□□ -0.64
LINC00963-219ENST00000624390 ITPK1Q13572 414 aa11.06□□□□□ -0.64
LINC00963-219ENST00000624390 DCTN1Q14203 1278 aa11.06□□□□□ -0.64
LINC00963-219ENST00000624390 TTC5Q8N0Z6 440 aa11.06□□□□□ -0.64
LINC00963-219ENST00000624390 LINC00116Q8NCU8 138 aa11.06□□□□□ -0.64
LINC00963-219ENST00000624390 PLEKHF1Q96S99 279 aa11.06□□□□□ -0.64
LINC00963-219ENST00000624390 ADAMTS8Q9UP79 889 aa11.06□□□□□ -0.64
LINC00963-219ENST00000624390 BTAF1O14981 1849 aa11.06□□□□□ -0.64
LINC00963-219ENST00000624390 PHF14O94880 888 aa11.05□□□□□ -0.64
LINC00963-219ENST00000624390 NFE2L2Q16236 605 aa11.05□□□□□ -0.64
LINC00963-219ENST00000624390 SLC4A9Q96Q91 983 aa11.05□□□□□ -0.64
LINC00963-219ENST00000624390 PPP1R1BQ9UD71 204 aaPredicted RBP11.05□□□□□ -0.64
LINC00963-219ENST00000624390 BTBD11A6QL63 1104 aa11.04□□□□□ -0.64
LINC00963-219ENST00000624390 GNPATO15228 680 aa11.04□□□□□ -0.64
LINC00963-219ENST00000624390 HTATSF1O43719 755 aaKnown RBP11.04□□□□□ -0.64
LINC00963-219ENST00000624390 RIPK4P57078 832 aa11.04□□□□□ -0.64
LINC00963-219ENST00000624390 NEUROD2Q15784 382 aa11.04□□□□□ -0.64
LINC00963-219ENST00000624390 SMIM5Q71RC9 77 aa11.04□□□□□ -0.64
LINC00963-219ENST00000624390 COL23A1Q86Y22 540 aaPredicted RBP11.04□□□□□ -0.64
LINC00963-219ENST00000624390 PNPLA7Q6ZV29 1317 aa11.04□□□□□ -0.64
LINC00963-219ENST00000624390 CCDC184Q52MB2 194 aa11.03□□□□□ -0.64
LINC00963-219ENST00000624390 FLAD1Q8NFF5 587 aa11.03□□□□□ -0.64
LINC00963-219ENST00000624390 RUNDC1Q96C34 613 aa11.03□□□□□ -0.64
LINC00963-219ENST00000624390 MTFR1LQ9H019 292 aa11.03□□□□□ -0.64
LINC00963-219ENST00000624390 RRP7AQ9Y3A4 280 aaKnown RBP11.03□□□□□ -0.64
LINC00963-219ENST00000624390 RREB1Q92766 1687 aa11.03□□□□□ -0.64
LINC00963-219ENST00000624390 NUP188Q5SRE5 1749 aa11.03□□□□□ -0.64
LINC00963-219ENST00000624390 TOGARAM1Q9Y4F4 1720 aa11.02□□□□□ -0.65
LINC00963-219ENST00000624390 TAF7Q15545 349 aaPredicted RBP11.02□□□□□ -0.65
LINC00963-219ENST00000624390 ZNF790Q6PG37 636 aa11.02□□□□□ -0.65
LINC00963-219ENST00000624390 DNAJC10Q8IXB1 793 aa11.02□□□□□ -0.65
LINC00963-219ENST00000624390 PIAS4Q8N2W9 510 aaPredicted RBP11.02□□□□□ -0.65
LINC00963-219ENST00000624390 SLC16A10Q8TF71 515 aa11.02□□□□□ -0.65
LINC00963-219ENST00000624390 THUMPD2Q9BTF0 503 aaKnown RBP11.02□□□□□ -0.65
LINC00963-219ENST00000624390 MRS2Q9HD23 443 aa11.02□□□□□ -0.65
LINC00963-219ENST00000624390 MIS18AQ9NYP9 233 aa11.02□□□□□ -0.65
LINC00963-219ENST00000624390 RTCBQ9Y3I0 505 aaKnown RBP11.02□□□□□ -0.65
LINC00963-219ENST00000624390 RGPD3A6NKT7 1758 aaPredicted RBP11.01□□□□□ -0.65
LINC00963-219ENST00000624390 RGPD4Q7Z3J3 1758 aa11.01□□□□□ -0.65
LINC00963-219ENST00000624390 SRCAPQ6ZRS2 3230 aa11.01□□□□□ -0.65
LINC00963-219ENST00000624390 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.01□□□□□ -0.65
LINC00963-219ENST00000624390 KCNQ3O43525 872 aa11.01□□□□□ -0.65
LINC00963-219ENST00000624390 POLD1P28340 1107 aa11.01□□□□□ -0.65
LINC00963-219ENST00000624390 TMPOP42166 694 aaKnown RBP11.01□□□□□ -0.65
LINC00963-219ENST00000624390 TRAPPC3LQ5T215 181 aa11.01□□□□□ -0.65
LINC00963-219ENST00000624390 FMNL2Q96PY5 1086 aa11.01□□□□□ -0.65
LINC00963-219ENST00000624390 CRKLP46109 303 aaKnown RBP11□□□□□ -0.65
LINC00963-219ENST00000624390 RC3H1Q5TC82 1133 aaKnown RBP11□□□□□ -0.65
LINC00963-219ENST00000624390 MSL1Q68DK7 614 aa11□□□□□ -0.65
LINC00963-219ENST00000624390 AMIGO3Q86WK7 504 aa11□□□□□ -0.65
LINC00963-219ENST00000624390 ZNF496Q96IT1 587 aaPredicted RBP11□□□□□ -0.65
LINC00963-219ENST00000624390 CEMIPQ8WUJ3 1361 aa11□□□□□ -0.65
LINC00963-219ENST00000624390 RPS6KA4O75676 772 aa10.99□□□□□ -0.65
LINC00963-219ENST00000624390 STARD3NLO95772 234 aa10.99□□□□□ -0.65
LINC00963-219ENST00000624390 SSFA2P28290 1259 aa10.99□□□□□ -0.65
LINC00963-219ENST00000624390 LMOD3Q0VAK6 560 aa10.99□□□□□ -0.65
LINC00963-219ENST00000624390 VSIG10Q8N0Z9 540 aa10.99□□□□□ -0.65
LINC00963-219ENST00000624390 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
LINC00963-219ENST00000624390 PNISRQ8TF01 805 aaKnown RBP10.99□□□□□ -0.65
LINC00963-219ENST00000624390 SENP3-EIF4A1A0A087X0R7 540 aa10.98□□□□□ -0.65
LINC00963-219ENST00000624390 APAF1O14727 1248 aa10.98□□□□□ -0.65
LINC00963-219ENST00000624390 CYP19A1P11511 503 aaPredicted RBP10.98□□□□□ -0.65
LINC00963-219ENST00000624390 CANXP27824 592 aaKnown RBP10.98□□□□□ -0.65
LINC00963-219ENST00000624390 RFC4P35249 363 aa10.98□□□□□ -0.65
LINC00963-219ENST00000624390 PTGER2P43116 358 aa10.98□□□□□ -0.65
LINC00963-219ENST00000624390 ARHGEF1Q92888 912 aaKnown RBP10.98□□□□□ -0.65
LINC00963-219ENST00000624390 ARXQ96QS3 562 aa10.98□□□□□ -0.65
LINC00963-219ENST00000624390 TEX13AQ9BXU3 409 aaPredicted RBP10.98□□□□□ -0.65
LINC00963-219ENST00000624390 CCDC87Q9NVE4 849 aa10.98□□□□□ -0.65
LINC00963-219ENST00000624390 LAS1LQ9Y4W2 734 aaKnown RBP10.98□□□□□ -0.65
LINC00963-219ENST00000624390 CNTNAP4Q9C0A0 1308 aa10.98□□□□□ -0.65
LINC00963-219ENST00000624390 ITGB4P16144 1822 aa10.98□□□□□ -0.65
LINC00963-219ENST00000624390 INTS5Q6P9B9 1019 aaKnown RBP10.97□□□□□ -0.65
LINC00963-219ENST00000624390 ZNF330Q9Y3S2 320 aaPredicted RBP10.97□□□□□ -0.65
LINC00963-219ENST00000624390 PAPPAQ13219 1627 aa10.96□□□□□ -0.65
LINC00963-219ENST00000624390 MRC1P22897 1456 aa10.96□□□□□ -0.65
LINC00963-219ENST00000624390 HEG1Q9ULI3 1381 aa10.96□□□□□ -0.65
LINC00963-219ENST00000624390 SNRPA1P09661 255 aaKnown RBP10.96□□□□□ -0.65
LINC00963-219ENST00000624390 ADRA2BP18089 450 aa10.96□□□□□ -0.65
LINC00963-219ENST00000624390 NPM2Q86SE8 214 aaKnown RBP10.96□□□□□ -0.65
LINC00963-219ENST00000624390 FAM9BQ8IZU0 186 aa10.96□□□□□ -0.65
LINC00963-219ENST00000624390 TSPYL4Q9UJ04 414 aa10.96□□□□□ -0.65
LINC00963-219ENST00000624390 LY75O60449 1722 aa10.95□□□□□ -0.66
LINC00963-219ENST00000624390 PRAMEF22A3QJZ6 481 aa10.95□□□□□ -0.66
LINC00963-219ENST00000624390 ZPR1O75312 459 aa10.95□□□□□ -0.66
LINC00963-219ENST00000624390 SGIP1Q9BQI5 828 aa10.95□□□□□ -0.66
LINC00963-219ENST00000624390 TRIM35Q9UPQ4 493 aa10.95□□□□□ -0.66
LINC00963-219ENST00000624390 ZBTB1Q9Y2K1 713 aa10.95□□□□□ -0.66
LINC00963-219ENST00000624390 USP16Q9Y5T5 823 aa10.95□□□□□ -0.66
LINC00963-219ENST00000624390 A1BGP04217 495 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms