RNA–Protein interactions for RNA: ENST00000623385.3

TRIM39-RPP21-201, Transcript of TRIM39-RPP21 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM39-RPP21, Length 1,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-RPP21-201ENST00000623385 SIPA1L3O60292 1781 aaPredicted RBP17.16■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 TEFQ10587 303 aa17.16■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 FAM196AQ6ZSG2 479 aa17.16■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 TAF7Q15545 349 aaPredicted RBP17.15■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 SYTL4Q96C24 671 aaPredicted RBP17.15■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 ITGB4P16144 1822 aa17.15■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 CHL1O00533 1208 aa17.14■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 KCNQ3O43525 872 aa17.14■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 GOLGA2Q08379 1002 aa17.14■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 LAS1LQ9Y4W2 734 aaKnown RBP17.14■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 IL16Q14005 1332 aa17.14■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 SLC39A6Q13433 755 aa17.13■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 TSR2Q969E8 191 aaKnown RBP17.13■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 CFAP44Q96MT7 982 aa17.13■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 IFT57Q9NWB7 429 aa17.13■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 TMOD3Q9NYL9 352 aa17.13■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 SBF2Q86WG5 1849 aa17.13■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 NHSQ6T4R5 1651 aa17.13■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 SLFN5Q08AF3 891 aa17.13■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 MBIPQ9NS73 344 aa17.13■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 BTBD11A6QL63 1104 aa17.12■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 TRIM37O94972 964 aa17.12■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 CALD1Q05682 793 aaKnown RBP17.12■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 TRMT2AQ8IZ69 625 aaKnown RBP17.12■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 ATG3Q9NT62 314 aa17.12■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 ASAP1Q9ULH1 1129 aa17.12■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 GNAI1P63096 354 aa17.1■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 FANCIQ9NVI1 1328 aa17.1■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 ZNF790Q6PG37 636 aa17.1■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 BCL11BQ9C0K0 894 aaPredicted RBP17.1■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 TSPYL4Q9UJ04 414 aa17.1■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 PAPPAQ13219 1627 aa17.09■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 KDM3BQ7LBC6 1761 aa17.09■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 E9PSI1 815 aa17.09■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 KRT24Q2M2I5 525 aa17.09■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 DUSP27Q5VZP5 1158 aa17.09■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 ILDR2Q71H61 639 aa17.09■□□□□ 0.33
TRIM39-RPP21-201ENST00000623385 BABAM1Q9NWV8 329 aa17.08■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 BTAF1O14981 1849 aa17.08■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 KCPQ6ZWJ8 1503 aa17.07■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 EIF4A1P60842 406 aaKnown RBP17.07■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 ZNF496Q96IT1 587 aaPredicted RBP17.07■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 SLC4A9Q96Q91 983 aa17.06■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 MYH16Q9H6N6 1097 aa17.06■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 PTCD1O75127 700 aaKnown RBP17.05■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 C8orf58Q8NAV2 365 aa17.05■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 UBR2Q8IWV8 1755 aa17.05■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 HEG1Q9ULI3 1381 aa17.05■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 PRAMEF22A3QJZ6 481 aa17.04■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 EXOSC9Q06265 439 aaKnown RBP17.04■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 TSPYL6Q8N831 410 aa17.04■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 KAT6BQ8WYB5 2073 aa17.04■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 PALLDQ8WX93 1383 aa17.04■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 TTC5Q8N0Z6 440 aa17.03■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 ELL2O00472 640 aaPredicted RBP17.02■□□□□ 0.32
TRIM39-RPP21-201ENST00000623385 GIGYF1O75420 1035 aaPredicted RBP17.01■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 APBA3O96018 575 aa17.01■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 KCNQ4P56696 695 aa17.01■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 PROM2Q8N271 834 aa17.01■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 SMARCC1Q92922 1105 aaPredicted RBP17.01■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 FMNL2Q96PY5 1086 aa17.01■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 LOC102724428A0A0B4J2F2 783 aa17■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 SIK1P57059 783 aa17■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 LY75O60449 1722 aa16.99■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 ITPK1Q13572 414 aa16.99■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 C5P01031 1676 aa16.99■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 PLSCR1O15162 318 aa16.98■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 VAMP4O75379 141 aa16.98■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 DNAJC10Q8IXB1 793 aa16.98■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 LRRC4BQ9NT99 713 aa16.98■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 USP16Q9Y5T5 823 aa16.98■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 TWISTNBQ3B726 338 aaPredicted RBP16.97■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 TJP1Q07157 1748 aa16.97■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 SNRPA1P09661 255 aaKnown RBP16.97■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 DEFB132Q7Z7B7 95 aa16.97■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 VSIG10Q8N0Z9 540 aa16.97■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 ATP6V1AP38606 617 aa16.96■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 EN1Q05925 392 aaPredicted RBP16.96■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 UPF1Q92900 1129 aaKnown RBP eCLIP16.96■□□□□ 0.31
TRIM39-RPP21-201ENST00000623385 TXNRD1Q16881 649 aa16.95■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 CCNL1Q9UK58 526 aaPredicted RBP16.95■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 ZNF831Q5JPB2 1677 aa16.95■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 NECTIN2Q92692 538 aa16.94■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 CAMKK2Q96RR4 588 aa16.94■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 CICQ96RK0 1608 aaPredicted RBP16.94■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 TCERG1O14776 1098 aaKnown RBP16.94■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 HOXB7P09629 217 aa16.94■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 CYP19A1P11511 503 aaPredicted RBP16.94■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 EIF2S2P20042 333 aaKnown RBP16.94■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 EZH2Q15910 746 aaKnown RBP16.94■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 LINC00116Q8NCU8 138 aa16.94■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 CCDC125Q86Z20 511 aa16.93■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 PIP4K2AP48426 406 aaPredicted RBP16.92■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 HDGFL1Q5TGJ6 251 aa16.92■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 RGPD3A6NKT7 1758 aaPredicted RBP16.92■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 RGPD4Q7Z3J3 1758 aa16.92■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 A1BGP04217 495 aa16.91■□□□□ 0.3
TRIM39-RPP21-201ENST00000623385 SF3B2Q13435 895 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms