RNA–Protein interactions for RNA: ENST00000622285.1

U1.30-201, humanhuman

BASIC

Gene U1, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.30-201ENST00000622285 MARCH10Q8NA82 808 aaPredicted RBP12.98□□□□□ -0.33
U1.30-201ENST00000622285 MBIPQ9NS73 344 aa12.98□□□□□ -0.33
U1.30-201ENST00000622285 DUSP27Q5VZP5 1158 aa12.97□□□□□ -0.33
U1.30-201ENST00000622285 TSR2Q969E8 191 aaKnown RBP12.97□□□□□ -0.33
U1.30-201ENST00000622285 SCN11AQ9UI33 1791 aa12.97□□□□□ -0.33
U1.30-201ENST00000622285 SOS1Q07889 1333 aaPredicted RBP12.96□□□□□ -0.33
U1.30-201ENST00000622285 ZNF853P0CG23 659 aa12.96□□□□□ -0.33
U1.30-201ENST00000622285 ZNF428Q96B54 188 aa12.96□□□□□ -0.33
U1.30-201ENST00000622285 SHANK3Q9BYB0 1731 aa12.96□□□□□ -0.34
U1.30-201ENST00000622285 HMGB2P26583 209 aaKnown RBP12.95□□□□□ -0.34
U1.30-201ENST00000622285 PRIM1P49642 420 aaKnown RBP12.95□□□□□ -0.34
U1.30-201ENST00000622285 EXOSC9Q06265 439 aaKnown RBP12.95□□□□□ -0.34
U1.30-201ENST00000622285 ZNF790Q6PG37 636 aa12.95□□□□□ -0.34
U1.30-201ENST00000622285 SMARCC1Q92922 1105 aaPredicted RBP12.95□□□□□ -0.34
U1.30-201ENST00000622285 ACSBG1Q96GR2 724 aa12.95□□□□□ -0.34
U1.30-201ENST00000622285 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
U1.30-201ENST00000622285 MIS18AQ9NYP9 233 aa12.95□□□□□ -0.34
U1.30-201ENST00000622285 MRC1P22897 1456 aa12.95□□□□□ -0.34
U1.30-201ENST00000622285 ADAMTS7Q9UKP4 1686 aa12.94□□□□□ -0.34
U1.30-201ENST00000622285 TWISTNBQ3B726 338 aaPredicted RBP12.94□□□□□ -0.34
U1.30-201ENST00000622285 POTEAQ6S8J7 498 aa12.94□□□□□ -0.34
U1.30-201ENST00000622285 TRMT2AQ8IZ69 625 aaKnown RBP12.94□□□□□ -0.34
U1.30-201ENST00000622285 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.94□□□□□ -0.34
U1.30-201ENST00000622285 HOXB7P09629 217 aa12.93□□□□□ -0.34
U1.30-201ENST00000622285 CANXP27824 592 aaKnown RBP12.93□□□□□ -0.34
U1.30-201ENST00000622285 STK31Q9BXU1 1019 aa12.93□□□□□ -0.34
U1.30-201ENST00000622285 SPINK5Q9NQ38 1064 aaPredicted RBP12.93□□□□□ -0.34
U1.30-201ENST00000622285 RGS17Q9UGC6 210 aaPredicted RBP12.93□□□□□ -0.34
U1.30-201ENST00000622285 RCAN3Q9UKA8 241 aa12.93□□□□□ -0.34
U1.30-201ENST00000622285 BCL9O00512 1426 aa12.93□□□□□ -0.34
U1.30-201ENST00000622285 DOT1LQ8TEK3 1739 aa12.92□□□□□ -0.34
U1.30-201ENST00000622285 PIGBQ92521 554 aa12.92□□□□□ -0.34
U1.30-201ENST00000622285 TEX13AQ9BXU3 409 aaPredicted RBP12.92□□□□□ -0.34
U1.30-201ENST00000622285 RGS12O14924 1447 aa12.91□□□□□ -0.34
U1.30-201ENST00000622285 VIRMAQ69YN4 1812 aaKnown RBP12.91□□□□□ -0.34
U1.30-201ENST00000622285 ELL2O00472 640 aaPredicted RBP12.91□□□□□ -0.34
U1.30-201ENST00000622285 SNRPA1P09661 255 aaKnown RBP12.91□□□□□ -0.34
U1.30-201ENST00000622285 EIF4A1P60842 406 aaKnown RBP12.91□□□□□ -0.34
U1.30-201ENST00000622285 SLC39A6Q13433 755 aa12.91□□□□□ -0.34
U1.30-201ENST00000622285 CCDC30Q5VVM6 783 aa12.91□□□□□ -0.34
U1.30-201ENST00000622285 NPM2Q86SE8 214 aaKnown RBP12.91□□□□□ -0.34
U1.30-201ENST00000622285 RBM42Q9BTD8 480 aaKnown RBP12.91□□□□□ -0.34
U1.30-201ENST00000622285 NEFLP07196 543 aa12.9□□□□□ -0.34
U1.30-201ENST00000622285 SF3B2Q13435 895 aaKnown RBP12.9□□□□□ -0.34
U1.30-201ENST00000622285 BCL11BQ9C0K0 894 aaPredicted RBP12.9□□□□□ -0.34
U1.30-201ENST00000622285 PTCD1O75127 700 aaKnown RBP12.89□□□□□ -0.35
U1.30-201ENST00000622285 ALDH1L2Q3SY69 923 aa12.89□□□□□ -0.35
U1.30-201ENST00000622285 FAM182BQ5T319 152 aa12.89□□□□□ -0.35
U1.30-201ENST00000622285 HDGFL1Q5TGJ6 251 aa12.89□□□□□ -0.35
U1.30-201ENST00000622285 VSIG10Q8N0Z9 540 aa12.89□□□□□ -0.35
U1.30-201ENST00000622285 SMC4Q9NTJ3 1288 aa12.89□□□□□ -0.35
U1.30-201ENST00000622285 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
U1.30-201ENST00000622285 TOGARAM1Q9Y4F4 1720 aa12.88□□□□□ -0.35
U1.30-201ENST00000622285 STARD3NLO95772 234 aa12.88□□□□□ -0.35
U1.30-201ENST00000622285 C8orf58Q8NAV2 365 aa12.88□□□□□ -0.35
U1.30-201ENST00000622285 ATG3Q9NT62 314 aa12.88□□□□□ -0.35
U1.30-201ENST00000622285 HEG1Q9ULI3 1381 aa12.88□□□□□ -0.35
U1.30-201ENST00000622285 KDM3BQ7LBC6 1761 aa12.88□□□□□ -0.35
U1.30-201ENST00000622285 KIF16BQ96L93 1317 aa12.88□□□□□ -0.35
U1.30-201ENST00000622285 NHSQ6T4R5 1651 aa12.87□□□□□ -0.35
U1.30-201ENST00000622285 PALLDQ8WX93 1383 aa12.87□□□□□ -0.35
U1.30-201ENST00000622285 IPO8O15397 1037 aaKnown RBP12.87□□□□□ -0.35
U1.30-201ENST00000622285 TRIM37O94972 964 aa12.87□□□□□ -0.35
U1.30-201ENST00000622285 MS4A1P11836 297 aa12.87□□□□□ -0.35
U1.30-201ENST00000622285 EIF2S2P20042 333 aaKnown RBP12.87□□□□□ -0.35
U1.30-201ENST00000622285 ZNF496Q96IT1 587 aaPredicted RBP12.87□□□□□ -0.35
U1.30-201ENST00000622285 ASAP1Q9ULH1 1129 aa12.87□□□□□ -0.35
U1.30-201ENST00000622285 KCNQ3O43525 872 aa12.86□□□□□ -0.35
U1.30-201ENST00000622285 KCNQ2O43526 872 aa12.86□□□□□ -0.35
U1.30-201ENST00000622285 VAMP4O75379 141 aa12.86□□□□□ -0.35
U1.30-201ENST00000622285 GIGYF1O75420 1035 aaPredicted RBP12.86□□□□□ -0.35
U1.30-201ENST00000622285 ITGB4P16144 1822 aa12.85□□□□□ -0.35
U1.30-201ENST00000622285 BRWD3Q6RI45 1802 aa12.85□□□□□ -0.35
U1.30-201ENST00000622285 ATP6V1AP38606 617 aa12.85□□□□□ -0.35
U1.30-201ENST00000622285 RARSP54136 660 aaKnown RBP12.85□□□□□ -0.35
U1.30-201ENST00000622285 TSPYL6Q8N831 410 aa12.85□□□□□ -0.35
U1.30-201ENST00000622285 NECTIN2Q92692 538 aa12.85□□□□□ -0.35
U1.30-201ENST00000622285 DBF4Q9UBU7 674 aaPredicted RBP12.85□□□□□ -0.35
U1.30-201ENST00000622285 PAPPAQ13219 1627 aa12.84□□□□□ -0.35
U1.30-201ENST00000622285 KAT6BQ8WYB5 2073 aa12.84□□□□□ -0.35
U1.30-201ENST00000622285 LOC102724428A0A0B4J2F2 783 aa12.84□□□□□ -0.35
U1.30-201ENST00000622285 SIK1P57059 783 aa12.84□□□□□ -0.35
U1.30-201ENST00000622285 KRT24Q2M2I5 525 aa12.84□□□□□ -0.35
U1.30-201ENST00000622285 FRAT1Q92837 279 aaPredicted RBP12.84□□□□□ -0.35
U1.30-201ENST00000622285 ERBB4Q15303 1308 aa12.84□□□□□ -0.35
U1.30-201ENST00000622285 DDX58O95786 925 aaKnown RBP12.83□□□□□ -0.36
U1.30-201ENST00000622285 APBA3O96018 575 aa12.83□□□□□ -0.36
U1.30-201ENST00000622285 HYPKQ9NX55 129 aa12.83□□□□□ -0.36
U1.30-201ENST00000622285 CCNL1Q9UK58 526 aaPredicted RBP12.83□□□□□ -0.36
U1.30-201ENST00000622285 SUPT16HQ9Y5B9 1047 aaKnown RBP12.83□□□□□ -0.36
U1.30-201ENST00000622285 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
U1.30-201ENST00000622285 SLC27A3Q5K4L6 730 aa12.82□□□□□ -0.36
U1.30-201ENST00000622285 ZKSCAN2Q63HK3 967 aa12.82□□□□□ -0.36
U1.30-201ENST00000622285 FTSJ3Q8IY81 847 aaKnown RBP12.82□□□□□ -0.36
U1.30-201ENST00000622285 SSH1Q8WYL5 1049 aa12.82□□□□□ -0.36
U1.30-201ENST00000622285 BCL2L13Q9BXK5 485 aa12.82□□□□□ -0.36
U1.30-201ENST00000622285 KCPQ6ZWJ8 1503 aa12.82□□□□□ -0.36
U1.30-201ENST00000622285 BAG6P46379 1132 aa12.81□□□□□ -0.36
U1.30-201ENST00000622285 RRP1P56182 461 aaKnown RBP12.81□□□□□ -0.36
U1.30-201ENST00000622285 API5Q9BZZ5 524 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms