RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 ATF7IPQ6VMQ6 1270 aa12.37□□□□□ -0.43
COL25A1-209ENST00000622134 CCDC94Q9BW85 323 aaPredicted RBP12.37□□□□□ -0.43
COL25A1-209ENST00000622134 H0YHG0 523 aa12.36□□□□□ -0.43
COL25A1-209ENST00000622134 OFD1O75665 1012 aa12.36□□□□□ -0.43
COL25A1-209ENST00000622134 ZSCAN29Q8IWY8 852 aaPredicted RBP12.36□□□□□ -0.43
COL25A1-209ENST00000622134 HS1BP3Q53T59 392 aa12.36□□□□□ -0.43
COL25A1-209ENST00000622134 MAGI2Q86UL8 1455 aa12.36□□□□□ -0.43
COL25A1-209ENST00000622134 ARHGEF10O15013 1369 aa12.36□□□□□ -0.43
COL25A1-209ENST00000622134 KRI1Q8N9T8 703 aaKnown RBP12.36□□□□□ -0.43
COL25A1-209ENST00000622134 TPM1P09493 284 aa12.36□□□□□ -0.43
COL25A1-209ENST00000622134 PPP4R3BQ5MIZ7 849 aa12.36□□□□□ -0.43
COL25A1-209ENST00000622134 DBF4Q9UBU7 674 aaPredicted RBP12.36□□□□□ -0.43
COL25A1-209ENST00000622134 IL2RBP14784 551 aa12.35□□□□□ -0.43
COL25A1-209ENST00000622134 TRIM5Q9C035 493 aa12.35□□□□□ -0.43
COL25A1-209ENST00000622134 STK32BQ9NY57 414 aa12.35□□□□□ -0.43
COL25A1-209ENST00000622134 PDIA4P13667 645 aaKnown RBP12.35□□□□□ -0.43
COL25A1-209ENST00000622134 CTNNA3Q9UI47 895 aa12.35□□□□□ -0.43
COL25A1-209ENST00000622134 IRX3P78415 501 aaPredicted RBP12.35□□□□□ -0.43
COL25A1-209ENST00000622134 DDX46Q7L014 1031 aaKnown RBP12.35□□□□□ -0.43
COL25A1-209ENST00000622134 PANK1Q8TE04 598 aa12.35□□□□□ -0.43
COL25A1-209ENST00000622134 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
COL25A1-209ENST00000622134 ERICH4A6NGS2 130 aa12.34□□□□□ -0.43
COL25A1-209ENST00000622134 LDHCP07864 332 aa12.34□□□□□ -0.43
COL25A1-209ENST00000622134 CCDC184Q52MB2 194 aa12.34□□□□□ -0.43
COL25A1-209ENST00000622134 TMPOP42166 694 aaKnown RBP12.34□□□□□ -0.43
COL25A1-209ENST00000622134 TRMT112Q9UI30 125 aaKnown RBP12.34□□□□□ -0.43
COL25A1-209ENST00000622134 BAG6P46379 1132 aa12.34□□□□□ -0.43
COL25A1-209ENST00000622134 RPRD2Q5VT52 1461 aaKnown RBP12.33□□□□□ -0.43
COL25A1-209ENST00000622134 SNRPA1P09661 255 aaKnown RBP12.33□□□□□ -0.44
COL25A1-209ENST00000622134 LNPKQ9C0E8 428 aa12.33□□□□□ -0.44
COL25A1-209ENST00000622134 RRAGDQ9NQL2 400 aaPredicted RBP12.33□□□□□ -0.44
COL25A1-209ENST00000622134 SMC3Q9UQE7 1217 aa12.33□□□□□ -0.44
COL25A1-209ENST00000622134 IFIT5Q13325 482 aaKnown RBP12.33□□□□□ -0.44
COL25A1-209ENST00000622134 CHRNA2Q15822 529 aa12.33□□□□□ -0.44
COL25A1-209ENST00000622134 METTL24Q5JXM2 366 aa12.33□□□□□ -0.44
COL25A1-209ENST00000622134 BICD2Q8TD16 824 aa12.33□□□□□ -0.44
COL25A1-209ENST00000622134 RAI14Q9P0K7 980 aa12.33□□□□□ -0.44
COL25A1-209ENST00000622134 ANKIB1Q9P2G1 1089 aa12.33□□□□□ -0.44
COL25A1-209ENST00000622134 KIF2AO00139 706 aaPredicted RBP12.32□□□□□ -0.44
COL25A1-209ENST00000622134 AEBP1Q8IUX7 1158 aa12.32□□□□□ -0.44
COL25A1-209ENST00000622134 NAT10Q9H0A0 1025 aaKnown RBP12.32□□□□□ -0.44
COL25A1-209ENST00000622134 RPAP2Q8IXW5 612 aaPredicted RBP12.32□□□□□ -0.44
COL25A1-209ENST00000622134 LRP2BPQ9P2M1 347 aa12.32□□□□□ -0.44
COL25A1-209ENST00000622134 ANKRD18BA2A2Z9 1011 aa12.32□□□□□ -0.44
COL25A1-209ENST00000622134 CCDC192P0DO97 292 aa12.32□□□□□ -0.44
COL25A1-209ENST00000622134 DUSP27Q5VZP5 1158 aa12.32□□□□□ -0.44
COL25A1-209ENST00000622134 TBC1D2Q9BYX2 928 aa12.32□□□□□ -0.44
COL25A1-209ENST00000622134 SLC5A1P13866 664 aa12.32□□□□□ -0.44
COL25A1-209ENST00000622134 MAPK8IP2Q13387 824 aaPredicted RBP12.32□□□□□ -0.44
COL25A1-209ENST00000622134 NYXQ9GZU5 481 aa12.32□□□□□ -0.44
COL25A1-209ENST00000622134 C16orf71Q8IYS4 520 aaPredicted RBP12.31□□□□□ -0.44
COL25A1-209ENST00000622134 ATP7AQ04656 1500 aa12.31□□□□□ -0.44
COL25A1-209ENST00000622134 LRRCC1Q9C099 1032 aa12.31□□□□□ -0.44
COL25A1-209ENST00000622134 MYO1BO43795 1136 aa12.31□□□□□ -0.44
COL25A1-209ENST00000622134 EIF3JO75822 258 aaKnown RBP12.31□□□□□ -0.44
COL25A1-209ENST00000622134 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.31□□□□□ -0.44
COL25A1-209ENST00000622134 ABCA5Q8WWZ7 1642 aa12.3□□□□□ -0.44
COL25A1-209ENST00000622134 RUFY1Q96T51 708 aa12.3□□□□□ -0.44
COL25A1-209ENST00000622134 ATP2B2Q01814 1243 aa12.3□□□□□ -0.44
COL25A1-209ENST00000622134 SOGA3Q5TF21 947 aa12.3□□□□□ -0.44
COL25A1-209ENST00000622134 SPTY2D1Q68D10 685 aaPredicted RBP12.3□□□□□ -0.44
COL25A1-209ENST00000622134 PAXIP1Q6ZW49 1069 aaPredicted RBP12.3□□□□□ -0.44
COL25A1-209ENST00000622134 HDAC9Q9UKV0 1011 aa12.3□□□□□ -0.44
COL25A1-209ENST00000622134 PARP3Q9Y6F1 533 aa12.3□□□□□ -0.44
COL25A1-209ENST00000622134 MAPKBP1O60336 1514 aa12.3□□□□□ -0.44
COL25A1-209ENST00000622134 PPIP5K1Q6PFW1 1433 aa12.3□□□□□ -0.44
COL25A1-209ENST00000622134 TTLL12Q14166 644 aaPredicted RBP12.3□□□□□ -0.44
COL25A1-209ENST00000622134 NBPF6Q5VWK0 638 aa12.3□□□□□ -0.44
COL25A1-209ENST00000622134 NBPF5PQ86XG9 351 aaPredicted RBP12.3□□□□□ -0.44
COL25A1-209ENST00000622134 NBPF4Q96M43 638 aa12.3□□□□□ -0.44
COL25A1-209ENST00000622134 TRIM22Q8IYM9 498 aa12.29□□□□□ -0.44
COL25A1-209ENST00000622134 C6orf229H3BNL8 230 aa12.29□□□□□ -0.44
COL25A1-209ENST00000622134 CRACR2BQ8N4Y2 399 aaPredicted RBP12.29□□□□□ -0.44
COL25A1-209ENST00000622134 RTCBQ9Y3I0 505 aaKnown RBP12.29□□□□□ -0.44
COL25A1-209ENST00000622134 DISP1Q96F81 1524 aa12.29□□□□□ -0.44
COL25A1-209ENST00000622134 SRGAP3O43295 1099 aa12.29□□□□□ -0.44
COL25A1-209ENST00000622134 CDR1P51861 262 aa12.29□□□□□ -0.44
COL25A1-209ENST00000622134 KLHL40Q2TBA0 621 aa12.29□□□□□ -0.44
COL25A1-209ENST00000622134 SETDB2Q96T68 719 aa12.29□□□□□ -0.44
COL25A1-209ENST00000622134 SLAIN2Q9P270 581 aa12.29□□□□□ -0.44
COL25A1-209ENST00000622134 ALDH1L2Q3SY69 923 aa12.28□□□□□ -0.44
COL25A1-209ENST00000622134 SPC24Q8NBT2 197 aa12.28□□□□□ -0.44
COL25A1-209ENST00000622134 ZNF622Q969S3 477 aaKnown RBP eCLIP12.28□□□□□ -0.44
COL25A1-209ENST00000622134 PANK2Q9BZ23 570 aa12.28□□□□□ -0.44
COL25A1-209ENST00000622134 EMILIN1Q9Y6C2 1016 aa12.28□□□□□ -0.44
COL25A1-209ENST00000622134 RAB11FIP3O75154 756 aa12.28□□□□□ -0.44
COL25A1-209ENST00000622134 PDCP20941 246 aa12.28□□□□□ -0.44
COL25A1-209ENST00000622134 TXLNAP40222 546 aa12.28□□□□□ -0.44
COL25A1-209ENST00000622134 CCDC73Q6ZRK6 1079 aa12.28□□□□□ -0.44
COL25A1-209ENST00000622134 TNPO1Q92973 898 aaKnown RBP12.28□□□□□ -0.44
COL25A1-209ENST00000622134 FLT4P35916 1363 aa12.28□□□□□ -0.44
COL25A1-209ENST00000622134 ERLIN1O75477 346 aa12.28□□□□□ -0.44
COL25A1-209ENST00000622134 NF2P35240 595 aa12.28□□□□□ -0.44
COL25A1-209ENST00000622134 DZIP1Q86YF9 867 aaKnown RBP12.28□□□□□ -0.44
COL25A1-209ENST00000622134 CREBRFQ8IUR6 639 aa12.28□□□□□ -0.44
COL25A1-209ENST00000622134 USHBP1Q8N6Y0 703 aa12.28□□□□□ -0.44
COL25A1-209ENST00000622134 TFCP2L1Q9NZI6 479 aa12.28□□□□□ -0.44
COL25A1-209ENST00000622134 WDR33Q9C0J8 1336 aaKnown RBP12.28□□□□□ -0.44
COL25A1-209ENST00000622134 PES1O00541 588 aaKnown RBP12.27□□□□□ -0.44
COL25A1-209ENST00000622134 ANKRD1Q15327 319 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms