RNA–Protein interactions for RNA: ENST00000622063.4

CHRDL2-210, Transcript of chordin like 2, humanhuman

TSL 5 BASIC

Gene CHRDL2, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-210ENST00000622063 SPINK5Q9NQ38 1064 aaPredicted RBP26.89■■□□□ 1.9
CHRDL2-210ENST00000622063 TOGARAM1Q9Y4F4 1720 aa26.89■■□□□ 1.89
CHRDL2-210ENST00000622063 SCN11AQ9UI33 1791 aa26.88■■□□□ 1.89
CHRDL2-210ENST00000622063 SLFN5Q08AF3 891 aa26.88■■□□□ 1.89
CHRDL2-210ENST00000622063 ADAMTS7Q9UKP4 1686 aa26.87■■□□□ 1.89
CHRDL2-210ENST00000622063 PTF1AQ7RTS3 328 aa26.87■■□□□ 1.89
CHRDL2-210ENST00000622063 TRMT2AQ8IZ69 625 aaKnown RBP26.87■■□□□ 1.89
CHRDL2-210ENST00000622063 PIGBQ92521 554 aa26.87■■□□□ 1.89
CHRDL2-210ENST00000622063 DUSP27Q5VZP5 1158 aa26.86■■□□□ 1.89
CHRDL2-210ENST00000622063 SBF2Q86WG5 1849 aa26.86■■□□□ 1.89
CHRDL2-210ENST00000622063 NHSQ6T4R5 1651 aa26.84■■□□□ 1.89
CHRDL2-210ENST00000622063 VIRMAQ69YN4 1812 aaKnown RBP26.83■■□□□ 1.89
CHRDL2-210ENST00000622063 MRC1P22897 1456 aa26.83■■□□□ 1.88
CHRDL2-210ENST00000622063 CALD1Q05682 793 aaKnown RBP26.82■■□□□ 1.88
CHRDL2-210ENST00000622063 TAF7Q15545 349 aaPredicted RBP26.82■■□□□ 1.88
CHRDL2-210ENST00000622063 ITGB4P16144 1822 aa26.82■■□□□ 1.88
CHRDL2-210ENST00000622063 WDR63Q8IWG1 891 aa26.82■■□□□ 1.88
CHRDL2-210ENST00000622063 SF3B2Q13435 895 aaKnown RBP26.81■■□□□ 1.88
CHRDL2-210ENST00000622063 BTBD11A6QL63 1104 aa26.8■■□□□ 1.88
CHRDL2-210ENST00000622063 E9PSI1 815 aa26.8■■□□□ 1.88
CHRDL2-210ENST00000622063 APBA3O96018 575 aa26.79■■□□□ 1.88
CHRDL2-210ENST00000622063 CCDC125Q86Z20 511 aa26.79■■□□□ 1.88
CHRDL2-210ENST00000622063 ASAP1Q9ULH1 1129 aa26.79■■□□□ 1.88
CHRDL2-210ENST00000622063 LAS1LQ9Y4W2 734 aaKnown RBP26.79■■□□□ 1.88
CHRDL2-210ENST00000622063 RNF123Q5XPI4 1314 aa26.77■■□□□ 1.88
CHRDL2-210ENST00000622063 ATG3Q9NT62 314 aa26.77■■□□□ 1.88
CHRDL2-210ENST00000622063 MIS18AQ9NYP9 233 aa26.77■■□□□ 1.88
CHRDL2-210ENST00000622063 SLC39A6Q13433 755 aa26.76■■□□□ 1.87
CHRDL2-210ENST00000622063 BTAF1O14981 1849 aa26.76■■□□□ 1.87
CHRDL2-210ENST00000622063 UPF1Q92900 1129 aaKnown RBP eCLIP26.76■■□□□ 1.87
CHRDL2-210ENST00000622063 SMARCC1Q92922 1105 aaPredicted RBP26.76■■□□□ 1.87
CHRDL2-210ENST00000622063 TTC5Q8N0Z6 440 aa26.75■■□□□ 1.87
CHRDL2-210ENST00000622063 CFAP44Q96MT7 982 aa26.75■■□□□ 1.87
CHRDL2-210ENST00000622063 TSPYL4Q9UJ04 414 aa26.75■■□□□ 1.87
CHRDL2-210ENST00000622063 RCAN3Q9UKA8 241 aa26.75■■□□□ 1.87
CHRDL2-210ENST00000622063 SIPA1L3O60292 1781 aaPredicted RBP26.74■■□□□ 1.87
CHRDL2-210ENST00000622063 ZNF790Q6PG37 636 aa26.74■■□□□ 1.87
CHRDL2-210ENST00000622063 IFT57Q9NWB7 429 aa26.74■■□□□ 1.87
CHRDL2-210ENST00000622063 BABAM1Q9NWV8 329 aa26.74■■□□□ 1.87
CHRDL2-210ENST00000622063 GNAI1P63096 354 aa26.73■■□□□ 1.87
CHRDL2-210ENST00000622063 FKBP8Q14318 412 aa26.73■■□□□ 1.87
CHRDL2-210ENST00000622063 IL16Q14005 1332 aa26.73■■□□□ 1.87
CHRDL2-210ENST00000622063 PALLDQ8WX93 1383 aa26.72■■□□□ 1.87
CHRDL2-210ENST00000622063 TNS1Q9HBL0 1735 aaKnown RBP26.72■■□□□ 1.87
CHRDL2-210ENST00000622063 CHL1O00533 1208 aa26.72■■□□□ 1.87
CHRDL2-210ENST00000622063 PLSCR1O15162 318 aa26.72■■□□□ 1.87
CHRDL2-210ENST00000622063 BAG6P46379 1132 aa26.72■■□□□ 1.87
CHRDL2-210ENST00000622063 NEFLP07196 543 aa26.71■■□□□ 1.87
CHRDL2-210ENST00000622063 KCNQ3O43525 872 aa26.7■■□□□ 1.87
CHRDL2-210ENST00000622063 PTCD1O75127 700 aaKnown RBP26.7■■□□□ 1.87
CHRDL2-210ENST00000622063 ZNF853P0CG23 659 aa26.7■■□□□ 1.87
CHRDL2-210ENST00000622063 RBM42Q9BTD8 480 aaKnown RBP26.7■■□□□ 1.86
CHRDL2-210ENST00000622063 IRX6P78412 446 aaPredicted RBP26.68■■□□□ 1.86
CHRDL2-210ENST00000622063 EN1Q05925 392 aaPredicted RBP26.68■■□□□ 1.86
CHRDL2-210ENST00000622063 DEFB132Q7Z7B7 95 aa26.68■■□□□ 1.86
CHRDL2-210ENST00000622063 MBIPQ9NS73 344 aa26.68■■□□□ 1.86
CHRDL2-210ENST00000622063 PAPPAQ13219 1627 aa26.66■■□□□ 1.86
CHRDL2-210ENST00000622063 LOC102724428A0A0B4J2F2 783 aa26.66■■□□□ 1.86
CHRDL2-210ENST00000622063 SIK1P57059 783 aa26.66■■□□□ 1.86
CHRDL2-210ENST00000622063 ZNF496Q96IT1 587 aaPredicted RBP26.66■■□□□ 1.86
CHRDL2-210ENST00000622063 FMNL2Q96PY5 1086 aa26.66■■□□□ 1.86
CHRDL2-210ENST00000622063 TSR2Q969E8 191 aaKnown RBP26.65■■□□□ 1.86
CHRDL2-210ENST00000622063 MYH16Q9H6N6 1097 aa26.65■■□□□ 1.86
CHRDL2-210ENST00000622063 CCNL1Q9UK58 526 aaPredicted RBP26.64■■□□□ 1.86
CHRDL2-210ENST00000622063 FANCIQ9NVI1 1328 aa26.64■■□□□ 1.86
CHRDL2-210ENST00000622063 EIF4A1P60842 406 aaKnown RBP26.63■■□□□ 1.85
CHRDL2-210ENST00000622063 EZH2Q15910 746 aaKnown RBP26.63■■□□□ 1.85
CHRDL2-210ENST00000622063 TXNRD1Q16881 649 aa26.63■■□□□ 1.85
CHRDL2-210ENST00000622063 CAMKK2Q96RR4 588 aa26.63■■□□□ 1.85
CHRDL2-210ENST00000622063 KDM3BQ7LBC6 1761 aa26.63■■□□□ 1.85
CHRDL2-210ENST00000622063 KCPQ6ZWJ8 1503 aa26.63■■□□□ 1.85
CHRDL2-210ENST00000622063 ATP6V1AP38606 617 aa26.63■■□□□ 1.85
CHRDL2-210ENST00000622063 SLC27A3Q5K4L6 730 aa26.63■■□□□ 1.85
CHRDL2-210ENST00000622063 RRP1P56182 461 aaKnown RBP26.62■■□□□ 1.85
CHRDL2-210ENST00000622063 PROM2Q8N271 834 aa26.62■■□□□ 1.85
CHRDL2-210ENST00000622063 KCNQ4P56696 695 aa26.61■■□□□ 1.85
CHRDL2-210ENST00000622063 VSIG10Q8N0Z9 540 aa26.61■■□□□ 1.85
CHRDL2-210ENST00000622063 SLC4A9Q96Q91 983 aa26.61■■□□□ 1.85
CHRDL2-210ENST00000622063 HEG1Q9ULI3 1381 aa26.6■■□□□ 1.85
CHRDL2-210ENST00000622063 LY75O60449 1722 aa26.6■■□□□ 1.85
CHRDL2-210ENST00000622063 UBR2Q8IWV8 1755 aa26.6■■□□□ 1.85
CHRDL2-210ENST00000622063 LRRC4BQ9NT99 713 aa26.59■■□□□ 1.85
CHRDL2-210ENST00000622063 RGPD3A6NKT7 1758 aaPredicted RBP26.58■■□□□ 1.85
CHRDL2-210ENST00000622063 RGPD4Q7Z3J3 1758 aa26.58■■□□□ 1.85
CHRDL2-210ENST00000622063 SNRPA1P09661 255 aaKnown RBP26.58■■□□□ 1.85
CHRDL2-210ENST00000622063 ITPK1Q13572 414 aa26.57■■□□□ 1.84
CHRDL2-210ENST00000622063 KRT24Q2M2I5 525 aa26.57■■□□□ 1.84
CHRDL2-210ENST00000622063 GIGYF1O75420 1035 aaPredicted RBP26.56■■□□□ 1.84
CHRDL2-210ENST00000622063 DNAJC10Q8IXB1 793 aa26.56■■□□□ 1.84
CHRDL2-210ENST00000622063 TEX13AQ9BXU3 409 aaPredicted RBP26.56■■□□□ 1.84
CHRDL2-210ENST00000622063 HMGB2P26583 209 aaKnown RBP26.55■■□□□ 1.84
CHRDL2-210ENST00000622063 PRAMEF22A3QJZ6 481 aa26.54■■□□□ 1.84
CHRDL2-210ENST00000622063 SOCS7O14512 581 aa26.54■■□□□ 1.84
CHRDL2-210ENST00000622063 ELL2O00472 640 aaPredicted RBP26.54■■□□□ 1.84
CHRDL2-210ENST00000622063 EXOSC9Q06265 439 aaKnown RBP26.54■■□□□ 1.84
CHRDL2-210ENST00000622063 C8orf58Q8NAV2 365 aa26.54■■□□□ 1.84
CHRDL2-210ENST00000622063 STARD3NLO95772 234 aa26.53■■□□□ 1.84
CHRDL2-210ENST00000622063 LINC00116Q8NCU8 138 aa26.52■■□□□ 1.84
CHRDL2-210ENST00000622063 USP16Q9Y5T5 823 aa26.52■■□□□ 1.84
CHRDL2-210ENST00000622063 ZNF831Q5JPB2 1677 aa26.51■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms