RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 CHL1O00533 1208 aa15.62■□□□□ 0.09
SCAMP1-207ENST00000621999 VAMP4O75379 141 aa15.62■□□□□ 0.09
SCAMP1-207ENST00000621999 FLIIQ13045 1269 aa15.62■□□□□ 0.09
SCAMP1-207ENST00000621999 POLR1AO95602 1720 aaPredicted RBP15.62■□□□□ 0.09
SCAMP1-207ENST00000621999 PNPLA6Q8IY17 1366 aa15.62■□□□□ 0.09
SCAMP1-207ENST00000621999 BICDL1Q6ZP65 573 aa15.62■□□□□ 0.09
SCAMP1-207ENST00000621999 KCNQ3O43525 872 aa15.62■□□□□ 0.09
SCAMP1-207ENST00000621999 ZBTB3Q9H5J0 574 aa15.62■□□□□ 0.09
SCAMP1-207ENST00000621999 ANKRD45Q5TZF3 282 aa15.61■□□□□ 0.09
SCAMP1-207ENST00000621999 ZNF142P52746 1687 aaPredicted RBP15.61■□□□□ 0.09
SCAMP1-207ENST00000621999 TRIM27P14373 513 aa15.6■□□□□ 0.09
SCAMP1-207ENST00000621999 GNAI3P08754 354 aa15.6■□□□□ 0.09
SCAMP1-207ENST00000621999 CCT4P50991 539 aaKnown RBP15.6■□□□□ 0.09
SCAMP1-207ENST00000621999 MVPQ14764 893 aaKnown RBP15.59■□□□□ 0.09
SCAMP1-207ENST00000621999 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.59■□□□□ 0.095e-8■□□□□ 9.7
SCAMP1-207ENST00000621999 PI4KAP2A4QPH2 592 aa15.59■□□□□ 0.09
SCAMP1-207ENST00000621999 PI4KAP1Q8N8J0 262 aa15.59■□□□□ 0.09
SCAMP1-207ENST00000621999 ZNF496Q96IT1 587 aaPredicted RBP15.59■□□□□ 0.09
SCAMP1-207ENST00000621999 HYPKQ9NX55 129 aa15.59■□□□□ 0.09
SCAMP1-207ENST00000621999 GORABQ5T7V8 394 aa15.59■□□□□ 0.09
SCAMP1-207ENST00000621999 TEX13AQ9BXU3 409 aaPredicted RBP15.59■□□□□ 0.09
SCAMP1-207ENST00000621999 CYP27B1O15528 508 aa15.58■□□□□ 0.08
SCAMP1-207ENST00000621999 CHD2O14647 1828 aaKnown RBP15.58■□□□□ 0.08
SCAMP1-207ENST00000621999 MYD88Q99836 296 aa15.58■□□□□ 0.08
SCAMP1-207ENST00000621999 COPS6Q7L5N1 327 aa15.57■□□□□ 0.08
SCAMP1-207ENST00000621999 SMARCC1Q92922 1105 aaPredicted RBP15.57■□□□□ 0.08
SCAMP1-207ENST00000621999 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
SCAMP1-207ENST00000621999 PHF14O94880 888 aa15.57■□□□□ 0.08
SCAMP1-207ENST00000621999 XAGE3Q8WTP9 111 aa15.56■□□□□ 0.08
SCAMP1-207ENST00000621999 DNAAF4Q8WXU2 420 aa15.56■□□□□ 0.08
SCAMP1-207ENST00000621999 TNNQ9UQP3 1299 aa15.56■□□□□ 0.08
SCAMP1-207ENST00000621999 ATP5J2-PTCD1G3V325 749 aa15.56■□□□□ 0.08
SCAMP1-207ENST00000621999 ZNF772Q68DY9 489 aaPredicted RBP15.56■□□□□ 0.08
SCAMP1-207ENST00000621999 GPTP24298 496 aa15.56■□□□□ 0.08
SCAMP1-207ENST00000621999 BCL11BQ9C0K0 894 aaPredicted RBP15.56■□□□□ 0.08
SCAMP1-207ENST00000621999 SPATA31A6Q5VVP1 1343 aa15.56■□□□□ 0.08
SCAMP1-207ENST00000621999 GNAI2P04899 355 aa15.56■□□□□ 0.08
SCAMP1-207ENST00000621999 CENPQQ7L2Z9 268 aaPredicted RBP15.56■□□□□ 0.08
SCAMP1-207ENST00000621999 MAP3K2Q9Y2U5 619 aa15.56■□□□□ 0.08
SCAMP1-207ENST00000621999 ERVV-2B6SEH9 535 aa15.55■□□□□ 0.08
SCAMP1-207ENST00000621999 CCDC85AQ96PX6 553 aaPredicted RBP15.55■□□□□ 0.08
SCAMP1-207ENST00000621999 SEPT12Q8IYM1 358 aa15.55■□□□□ 0.08
SCAMP1-207ENST00000621999 ANP32AP39687 249 aaKnown RBP15.55■□□□□ 0.08
SCAMP1-207ENST00000621999 TMX4Q9H1E5 349 aaPredicted RBP15.55■□□□□ 0.08
SCAMP1-207ENST00000621999 PHAXQ9H814 394 aaKnown RBP15.55■□□□□ 0.08
SCAMP1-207ENST00000621999 XRN1Q8IZH2 1706 aaKnown RBP15.55■□□□□ 0.08
SCAMP1-207ENST00000621999 KNDC1Q76NI1 1749 aa15.54■□□□□ 0.08
SCAMP1-207ENST00000621999 ZPR1O75312 459 aa15.54■□□□□ 0.08
SCAMP1-207ENST00000621999 RXRBP28702 533 aa15.54■□□□□ 0.08
SCAMP1-207ENST00000621999 EIF4A1P60842 406 aaKnown RBP15.54■□□□□ 0.08
SCAMP1-207ENST00000621999 ANKRD13DQ6ZTN6 518 aa15.54■□□□□ 0.08
SCAMP1-207ENST00000621999 MRPL50Q8N5N7 158 aaKnown RBP15.54■□□□□ 0.08
SCAMP1-207ENST00000621999 AK7Q96M32 723 aa15.54■□□□□ 0.08
SCAMP1-207ENST00000621999 ASAP1Q9ULH1 1129 aa15.54■□□□□ 0.08
SCAMP1-207ENST00000621999 A1BGP04217 495 aa15.54■□□□□ 0.08
SCAMP1-207ENST00000621999 G3BP1Q13283 466 aaKnown RBP eCLIP15.53■□□□□ 0.08
SCAMP1-207ENST00000621999 DNAJC10Q8IXB1 793 aa15.53■□□□□ 0.08
SCAMP1-207ENST00000621999 JARID2Q92833 1246 aaPredicted RBP15.53■□□□□ 0.08
SCAMP1-207ENST00000621999 TBC1D2BQ9UPU7 963 aa15.53■□□□□ 0.08
SCAMP1-207ENST00000621999 SURF6O75683 361 aaKnown RBP15.53■□□□□ 0.08
SCAMP1-207ENST00000621999 G2E3Q7L622 706 aa15.53■□□□□ 0.08
SCAMP1-207ENST00000621999 LNPKQ9C0E8 428 aa15.53■□□□□ 0.08
SCAMP1-207ENST00000621999 CASC1Q6TDU7 716 aa15.53■□□□□ 0.08
SCAMP1-207ENST00000621999 MAP2P11137 1827 aaKnown RBP15.53■□□□□ 0.08
SCAMP1-207ENST00000621999 MYOM1P52179 1685 aa15.52■□□□□ 0.08
SCAMP1-207ENST00000621999 ADGRB2O60241 1585 aa15.52■□□□□ 0.08
SCAMP1-207ENST00000621999 GJD4Q96KN9 370 aaPredicted RBP15.52■□□□□ 0.08
SCAMP1-207ENST00000621999 THRAP3Q9Y2W1 955 aaKnown RBP15.52■□□□□ 0.08
SCAMP1-207ENST00000621999 USP16Q9Y5T5 823 aa15.52■□□□□ 0.08
SCAMP1-207ENST00000621999 CRB1P82279 1406 aa15.52■□□□□ 0.07
SCAMP1-207ENST00000621999 PTPRCP08575 1304 aa15.52■□□□□ 0.07
SCAMP1-207ENST00000621999 TRIM6-TRIM34B2RNG4 842 aa15.52■□□□□ 0.07
SCAMP1-207ENST00000621999 BABAM1Q9NWV8 329 aa15.52■□□□□ 0.07
SCAMP1-207ENST00000621999 SSH2Q76I76 1423 aa15.51■□□□□ 0.07
SCAMP1-207ENST00000621999 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
SCAMP1-207ENST00000621999 CCNL1Q9UK58 526 aaPredicted RBP15.51■□□□□ 0.07
SCAMP1-207ENST00000621999 RGPD8O14715 1765 aaPredicted RBP15.51■□□□□ 0.07
SCAMP1-207ENST00000621999 PPP1R1BQ9UD71 204 aaPredicted RBP15.51■□□□□ 0.07
SCAMP1-207ENST00000621999 SIL1Q9H173 461 aa15.5■□□□□ 0.07
SCAMP1-207ENST00000621999 NALCNQ8IZF0 1738 aa15.5■□□□□ 0.07
SCAMP1-207ENST00000621999 ZNF521Q96K83 1311 aa15.5■□□□□ 0.07
SCAMP1-207ENST00000621999 A0A087WZG4 1122 aa15.5■□□□□ 0.07
SCAMP1-207ENST00000621999 GIGYF1O75420 1035 aaPredicted RBP15.5■□□□□ 0.07
SCAMP1-207ENST00000621999 FRAT2O75474 233 aaPredicted RBP15.5■□□□□ 0.07
SCAMP1-207ENST00000621999 KCNQ4P56696 695 aa15.5■□□□□ 0.07
SCAMP1-207ENST00000621999 FMN2Q9NZ56 1722 aa15.49■□□□□ 0.07
SCAMP1-207ENST00000621999 SRGAP3O43295 1099 aa15.49■□□□□ 0.07
SCAMP1-207ENST00000621999 KRT27Q7Z3Y8 459 aa15.49■□□□□ 0.07
SCAMP1-207ENST00000621999 DDX21Q9NR30 783 aaKnown RBP eCLIP15.49■□□□□ 0.07
SCAMP1-207ENST00000621999 ZNF652Q9Y2D9 606 aa15.49■□□□□ 0.07
SCAMP1-207ENST00000621999 TRIM37O94972 964 aa15.49■□□□□ 0.07
SCAMP1-207ENST00000621999 RLBP1P12271 317 aa15.49■□□□□ 0.07
SCAMP1-207ENST00000621999 PRAMEF22A3QJZ6 481 aa15.49■□□□□ 0.07
SCAMP1-207ENST00000621999 RFC4P35249 363 aa15.49■□□□□ 0.07
SCAMP1-207ENST00000621999 AAMPQ13685 434 aa15.49■□□□□ 0.07
SCAMP1-207ENST00000621999 CPDO75976 1380 aa15.49■□□□□ 0.07
SCAMP1-207ENST00000621999 PIGBQ92521 554 aa15.48■□□□□ 0.07
SCAMP1-207ENST00000621999 TRMT112Q9UI30 125 aaKnown RBP15.48■□□□□ 0.07
SCAMP1-207ENST00000621999 APBA3O96018 575 aa15.48■□□□□ 0.07
SCAMP1-207ENST00000621999 GPATCH3Q96I76 525 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms