RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 NOB1Q9ULX3 412 aaKnown RBP22.05■■□□□ 1.12
FAM3A-222ENST00000621967 IL2RBP14784 551 aa22.04■■□□□ 1.12
FAM3A-222ENST00000621967 BRPF1P55201 1214 aaPredicted RBP22.04■■□□□ 1.12
FAM3A-222ENST00000621967 ZNF772Q68DY9 489 aaPredicted RBP22.04■■□□□ 1.12
FAM3A-222ENST00000621967 THRAP3Q9Y2W1 955 aaKnown RBP22.04■■□□□ 1.12
FAM3A-222ENST00000621967 PARP4Q9UKK3 1724 aaKnown RBP22.04■■□□□ 1.12
FAM3A-222ENST00000621967 ZNF428Q96B54 188 aa22.04■■□□□ 1.12
FAM3A-222ENST00000621967 ATRNO75882 1429 aa22.03■■□□□ 1.12
FAM3A-222ENST00000621967 PHACTR3Q96KR7 559 aa22.03■■□□□ 1.12
FAM3A-222ENST00000621967 ITPRIPQ8IWB1 547 aa22.02■■□□□ 1.12
FAM3A-222ENST00000621967 WNK3Q9BYP7 1800 aa22.02■■□□□ 1.12
FAM3A-222ENST00000621967 IPO8O15397 1037 aaKnown RBP22.02■■□□□ 1.11
FAM3A-222ENST00000621967 NFE2L2Q16236 605 aa22.02■■□□□ 1.11
FAM3A-222ENST00000621967 TBC1D32Q96NH3 1257 aa22.02■■□□□ 1.11
FAM3A-222ENST00000621967 QTRT2Q9H974 415 aaKnown RBP22.02■■□□□ 1.11
FAM3A-222ENST00000621967 TMEM57Q8N5G2 664 aa22.01■■□□□ 1.11
FAM3A-222ENST00000621967 ZBTB40Q9NUA8 1239 aa22.01■■□□□ 1.11
FAM3A-222ENST00000621967 PLEKHG2Q9H7P9 1386 aa22.01■■□□□ 1.11
FAM3A-222ENST00000621967 OVOS2A0A0G2JMS6 1433 aa22■■□□□ 1.11
FAM3A-222ENST00000621967 SMC5Q8IY18 1101 aa22■■□□□ 1.11
FAM3A-222ENST00000621967 GJD4Q96KN9 370 aaPredicted RBP22■■□□□ 1.11
FAM3A-222ENST00000621967 AMOTQ4VCS5 1084 aa22■■□□□ 1.11
FAM3A-222ENST00000621967 PLEKHO1Q53GL0 409 aaPredicted RBP22■■□□□ 1.11
FAM3A-222ENST00000621967 CDCA7Q9BWT1 371 aaPredicted RBP22■■□□□ 1.11
FAM3A-222ENST00000621967 DISP2A7MBM2 1401 aa21.99■■□□□ 1.11
FAM3A-222ENST00000621967 BECN1Q14457 450 aa21.99■■□□□ 1.11
FAM3A-222ENST00000621967 BARGINQ6ZT62 677 aa21.99■■□□□ 1.11
FAM3A-222ENST00000621967 GAS2L2Q8NHY3 880 aa21.99■■□□□ 1.11
FAM3A-222ENST00000621967 UPF2Q9HAU5 1272 aaKnown RBP21.99■■□□□ 1.11
FAM3A-222ENST00000621967 GLI3P10071 1580 aa21.98■■□□□ 1.11
FAM3A-222ENST00000621967 FAM98CQ17RN3 349 aaKnown RBP21.98■■□□□ 1.11
FAM3A-222ENST00000621967 MTHFSDQ2M296 383 aaKnown RBP21.98■■□□□ 1.11
FAM3A-222ENST00000621967 SPG7Q9UQ90 795 aa21.98■■□□□ 1.11
FAM3A-222ENST00000621967 A0A0G2JS52 829 aa21.97■■□□□ 1.11
FAM3A-222ENST00000621967 CALD1Q05682 793 aaKnown RBP21.97■■□□□ 1.11
FAM3A-222ENST00000621967 PKD1L3Q7Z443 1732 aa21.97■■□□□ 1.11
FAM3A-222ENST00000621967 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.96■■□□□ 1.11
FAM3A-222ENST00000621967 ZNF530Q6P9A1 599 aaPredicted RBP21.96■■□□□ 1.11
FAM3A-222ENST00000621967 ZNF853P0CG23 659 aa21.95■■□□□ 1.1
FAM3A-222ENST00000621967 GSE1Q14687 1217 aa21.95■■□□□ 1.1
FAM3A-222ENST00000621967 ZCRB1Q8TBF4 217 aaKnown RBP21.95■■□□□ 1.1
FAM3A-222ENST00000621967 IFT57Q9NWB7 429 aa21.95■■□□□ 1.1
FAM3A-222ENST00000621967 C1orf141Q5JVX7 400 aa21.94■■□□□ 1.1
FAM3A-222ENST00000621967 PCDH11XQ9BZA7 1347 aa21.93■■□□□ 1.1
FAM3A-222ENST00000621967 PCDH11YQ9BZA8 1340 aa21.93■■□□□ 1.1
FAM3A-222ENST00000621967 VAMP4O75379 141 aa21.93■■□□□ 1.1
FAM3A-222ENST00000621967 GNAI1P63096 354 aa21.93■■□□□ 1.1
FAM3A-222ENST00000621967 ARHGAP45Q92619 1136 aa21.93■■□□□ 1.1
FAM3A-222ENST00000621967 TNS2Q63HR2 1409 aa21.93■■□□□ 1.1
FAM3A-222ENST00000621967 EXOC5O00471 708 aa21.92■■□□□ 1.1
FAM3A-222ENST00000621967 FRAT2O75474 233 aaPredicted RBP21.92■■□□□ 1.1
FAM3A-222ENST00000621967 DDB1Q16531 1140 aa21.92■■□□□ 1.1
FAM3A-222ENST00000621967 LRRC37A3O60309 1634 aa21.92■■□□□ 1.1
FAM3A-222ENST00000621967 RBM6P78332 1123 aaKnown RBP21.92■■□□□ 1.1
FAM3A-222ENST00000621967 LMOD3Q0VAK6 560 aa21.91■■□□□ 1.1
FAM3A-222ENST00000621967 MRPL50Q8N5N7 158 aaKnown RBP21.91■■□□□ 1.1
FAM3A-222ENST00000621967 MAP3K5Q99683 1374 aa21.91■■□□□ 1.1
FAM3A-222ENST00000621967 THSD7AQ9UPZ6 1657 aa21.91■■□□□ 1.1
FAM3A-222ENST00000621967 RGS17Q9UGC6 210 aaPredicted RBP21.9■■□□□ 1.1
FAM3A-222ENST00000621967 SHANK3Q9BYB0 1731 aa21.9■■□□□ 1.1
FAM3A-222ENST00000621967 GNAT3A8MTJ3 354 aa21.9■■□□□ 1.1
FAM3A-222ENST00000621967 AKAP4Q5JQC9 854 aa21.9■■□□□ 1.1
FAM3A-222ENST00000621967 IFNL2Q8IZJ0 200 aa21.9■■□□□ 1.1
FAM3A-222ENST00000621967 DDX54Q8TDD1 881 aaKnown RBP21.9■■□□□ 1.1
FAM3A-222ENST00000621967 RTF1Q92541 710 aaKnown RBP21.9■■□□□ 1.1
FAM3A-222ENST00000621967 NUCB1Q02818 461 aa21.89■■□□□ 1.09
FAM3A-222ENST00000621967 THUMPD2Q9BTF0 503 aaKnown RBP21.89■■□□□ 1.09
FAM3A-222ENST00000621967 ANTXR1Q9H6X2 564 aa21.89■■□□□ 1.09
FAM3A-222ENST00000621967 PHKG2P15735 406 aa21.88■■□□□ 1.09
FAM3A-222ENST00000621967 CYP27B1O15528 508 aa21.88■■□□□ 1.09
FAM3A-222ENST00000621967 RXRBP28702 533 aa21.88■■□□□ 1.09
FAM3A-222ENST00000621967 MBIPQ9NS73 344 aa21.88■■□□□ 1.09
FAM3A-222ENST00000621967 TSPYL6Q8N831 410 aa21.87■■□□□ 1.09
FAM3A-222ENST00000621967 TBC1D2Q9BYX2 928 aa21.87■■□□□ 1.09
FAM3A-222ENST00000621967 CHMP4BQ9H444 224 aaKnown RBP21.87■■□□□ 1.09
FAM3A-222ENST00000621967 ABCC4O15439 1325 aa21.87■■□□□ 1.09
FAM3A-222ENST00000621967 ZBTB7BO15156 539 aaPredicted RBP21.86■■□□□ 1.09
FAM3A-222ENST00000621967 ONECUT3O60422 494 aaPredicted RBP21.86■■□□□ 1.09
FAM3A-222ENST00000621967 CFAP44Q96MT7 982 aa21.86■■□□□ 1.09
FAM3A-222ENST00000621967 HSP90AB1P08238 724 aaKnown RBP21.86■■□□□ 1.09
FAM3A-222ENST00000621967 POTEAQ6S8J7 498 aa21.86■■□□□ 1.09
FAM3A-222ENST00000621967 SEPT12Q8IYM1 358 aa21.86■■□□□ 1.09
FAM3A-222ENST00000621967 HTATSF1O43719 755 aaKnown RBP21.85■■□□□ 1.09
FAM3A-222ENST00000621967 MPRIPQ6WCQ1 1025 aa21.84■■□□□ 1.09
FAM3A-222ENST00000621967 DCTN1Q14203 1278 aa21.84■■□□□ 1.09
FAM3A-222ENST00000621967 MCM10Q7L590 875 aa21.84■■□□□ 1.09
FAM3A-222ENST00000621967 C22orf23Q9BZE7 217 aa21.84■■□□□ 1.09
FAM3A-222ENST00000621967 TWISTNBQ3B726 338 aaPredicted RBP21.82■■□□□ 1.08
FAM3A-222ENST00000621967 CHD1LQ86WJ1 897 aa21.82■■□□□ 1.08
FAM3A-222ENST00000621967 DCAF5Q96JK2 942 aa21.82■■□□□ 1.08
FAM3A-222ENST00000621967 GCC1Q96CN9 775 aa21.81■■□□□ 1.08
FAM3A-222ENST00000621967 SLKQ9H2G2 1235 aaPredicted RBP21.8■■□□□ 1.08
FAM3A-222ENST00000621967 KDM6AO15550 1401 aaPredicted RBP21.8■■□□□ 1.08
FAM3A-222ENST00000621967 MFAP1P55081 439 aaKnown RBP21.8■■□□□ 1.08
FAM3A-222ENST00000621967 MARCH10Q8NA82 808 aaPredicted RBP21.8■■□□□ 1.08
FAM3A-222ENST00000621967 IL17REQ8NFR9 667 aa21.8■■□□□ 1.08
FAM3A-222ENST00000621967 RNMTO43148 476 aaKnown RBP21.79■■□□□ 1.08
FAM3A-222ENST00000621967 NKX1-1Q15270 411 aaPredicted RBP21.79■■□□□ 1.08
FAM3A-222ENST00000621967 C8orf58Q8NAV2 365 aa21.79■■□□□ 1.08
FAM3A-222ENST00000621967 LNPKQ9C0E8 428 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms