RNA–Protein interactions for RNA: ENST00000621790.4

TARDBP-226, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-226ENST00000621790 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
TARDBP-226ENST00000621790 RGS17Q9UGC6 210 aaPredicted RBP15.11■□□□□ 0.01
TARDBP-226ENST00000621790 TSPYL4Q9UJ04 414 aa15.11■□□□□ 0.01
TARDBP-226ENST00000621790 BTBD11A6QL63 1104 aa15.1■□□□□ 0.01
TARDBP-226ENST00000621790 ZNF428Q96B54 188 aa15.1■□□□□ 0.01
TARDBP-226ENST00000621790 MBIPQ9NS73 344 aa15.1■□□□□ 0.01
TARDBP-226ENST00000621790 LAS1LQ9Y4W2 734 aaKnown RBP15.1■□□□□ 0.01
TARDBP-226ENST00000621790 FANCIQ9NVI1 1328 aa15.1■□□□□ 0.01
TARDBP-226ENST00000621790 NFATC2IPQ8NCF5 419 aa15.09■□□□□ 0.01
TARDBP-226ENST00000621790 TMOD3Q9NYL9 352 aa15.09■□□□□ 0.01
TARDBP-226ENST00000621790 KRT27Q7Z3Y8 459 aa15.08■□□□□ 0
TARDBP-226ENST00000621790 HOXB7P09629 217 aa15.07■□□□□ 0
TARDBP-226ENST00000621790 FAM196AQ6ZSG2 479 aa15.07■□□□□ 0
TARDBP-226ENST00000621790 ZNF790Q6PG37 636 aa15.06■□□□□ 0
TARDBP-226ENST00000621790 POTEAQ6S8J7 498 aa15.06■□□□□ 0
TARDBP-226ENST00000621790 TTC5Q8N0Z6 440 aa15.06■□□□□ 0
TARDBP-226ENST00000621790 TSR2Q969E8 191 aaKnown RBP15.06■□□□□ 0
TARDBP-226ENST00000621790 SIPA1L3O60292 1781 aaPredicted RBP15.06■□□□□ 0
TARDBP-226ENST00000621790 VIRMAQ69YN4 1812 aaKnown RBP15.05■□□□□ -0
TARDBP-226ENST00000621790 PRIM1P49642 420 aaKnown RBP15.04■□□□□ -0
TARDBP-226ENST00000621790 EXOSC9Q06265 439 aaKnown RBP15.04■□□□□ -0
TARDBP-226ENST00000621790 PIGBQ92521 554 aa15.04■□□□□ -0
TARDBP-226ENST00000621790 SMARCC1Q92922 1105 aaPredicted RBP15.04■□□□□ -0
TARDBP-226ENST00000621790 EIF4A1P60842 406 aaKnown RBP15.03■□□□□ -0
TARDBP-226ENST00000621790 FMNL2Q96PY5 1086 aa15.03■□□□□ -0
TARDBP-226ENST00000621790 MIS18AQ9NYP9 233 aa15.03■□□□□ -0
TARDBP-226ENST00000621790 HEG1Q9ULI3 1381 aa15.02■□□□□ -0
TARDBP-226ENST00000621790 HMGB2P26583 209 aaKnown RBP15.02■□□□□ -0
TARDBP-226ENST00000621790 TWISTNBQ3B726 338 aaPredicted RBP15.02■□□□□ -0
TARDBP-226ENST00000621790 VSIG10Q8N0Z9 540 aa15.02■□□□□ -0
TARDBP-226ENST00000621790 RCAN3Q9UKA8 241 aa15.02■□□□□ -0
TARDBP-226ENST00000621790 KDM3BQ7LBC6 1761 aa15.02□□□□□ -0.01
TARDBP-226ENST00000621790 RGS12O14924 1447 aa15.01□□□□□ -0.01
TARDBP-226ENST00000621790 TOGARAM1Q9Y4F4 1720 aa15.01□□□□□ -0.01
TARDBP-226ENST00000621790 VAMP4O75379 141 aa15.01□□□□□ -0.01
TARDBP-226ENST00000621790 ALDH1L2Q3SY69 923 aa15.01□□□□□ -0.01
TARDBP-226ENST00000621790 SYTL4Q96C24 671 aaPredicted RBP15.01□□□□□ -0.01
TARDBP-226ENST00000621790 SNRPA1P09661 255 aaKnown RBP15□□□□□ -0.01
TARDBP-226ENST00000621790 TEX13AQ9BXU3 409 aaPredicted RBP15□□□□□ -0.01
TARDBP-226ENST00000621790 BCL11BQ9C0K0 894 aaPredicted RBP15□□□□□ -0.01
TARDBP-226ENST00000621790 DOT1LQ8TEK3 1739 aa15□□□□□ -0.01
TARDBP-226ENST00000621790 ITGB4P16144 1822 aa14.99□□□□□ -0.01
TARDBP-226ENST00000621790 GIGYF1O75420 1035 aaPredicted RBP14.99□□□□□ -0.01
TARDBP-226ENST00000621790 BRPF1P55201 1214 aaPredicted RBP14.99□□□□□ -0.01
TARDBP-226ENST00000621790 C8orf58Q8NAV2 365 aa14.99□□□□□ -0.01
TARDBP-226ENST00000621790 ACSBG1Q96GR2 724 aa14.99□□□□□ -0.01
TARDBP-226ENST00000621790 ATG3Q9NT62 314 aa14.99□□□□□ -0.01
TARDBP-226ENST00000621790 PAPPAQ13219 1627 aa14.99□□□□□ -0.01
TARDBP-226ENST00000621790 NHSQ6T4R5 1651 aa14.98□□□□□ -0.01
TARDBP-226ENST00000621790 SLC39A6Q13433 755 aa14.98□□□□□ -0.01
TARDBP-226ENST00000621790 CCDC30Q5VVM6 783 aa14.98□□□□□ -0.01
TARDBP-226ENST00000621790 ZNF496Q96IT1 587 aaPredicted RBP14.98□□□□□ -0.01
TARDBP-226ENST00000621790 BRWD3Q6RI45 1802 aa14.97□□□□□ -0.01
TARDBP-226ENST00000621790 KCNQ3O43525 872 aa14.97□□□□□ -0.01
TARDBP-226ENST00000621790 RARSP54136 660 aaKnown RBP14.97□□□□□ -0.01
TARDBP-226ENST00000621790 TSPYL6Q8N831 410 aa14.97□□□□□ -0.01
TARDBP-226ENST00000621790 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.97□□□□□ -0.01
TARDBP-226ENST00000621790 ASAP1Q9ULH1 1129 aa14.97□□□□□ -0.01
TARDBP-226ENST00000621790 ERBB4Q15303 1308 aa14.96□□□□□ -0.01
TARDBP-226ENST00000621790 STK31Q9BXU1 1019 aa14.96□□□□□ -0.01
TARDBP-226ENST00000621790 UBR2Q8IWV8 1755 aa14.96□□□□□ -0.02
TARDBP-226ENST00000621790 ELL2O00472 640 aaPredicted RBP14.95□□□□□ -0.02
TARDBP-226ENST00000621790 KCNQ2O43526 872 aa14.95□□□□□ -0.02
TARDBP-226ENST00000621790 KCPQ6ZWJ8 1503 aa14.95□□□□□ -0.02
TARDBP-226ENST00000621790 KIF16BQ96L93 1317 aa14.94□□□□□ -0.02
TARDBP-226ENST00000621790 KAT6BQ8WYB5 2073 aa14.94□□□□□ -0.02
TARDBP-226ENST00000621790 HDGFL1Q5TGJ6 251 aa14.94□□□□□ -0.02
TARDBP-226ENST00000621790 PALLDQ8WX93 1383 aa14.94□□□□□ -0.02
TARDBP-226ENST00000621790 IPO8O15397 1037 aaKnown RBP14.93□□□□□ -0.02
TARDBP-226ENST00000621790 PTCD1O75127 700 aaKnown RBP14.93□□□□□ -0.02
TARDBP-226ENST00000621790 STARD3NLO95772 234 aa14.93□□□□□ -0.02
TARDBP-226ENST00000621790 KRT24Q2M2I5 525 aa14.93□□□□□ -0.02
TARDBP-226ENST00000621790 FAM182BQ5T319 152 aa14.93□□□□□ -0.02
TARDBP-226ENST00000621790 SMC4Q9NTJ3 1288 aa14.93□□□□□ -0.02
TARDBP-226ENST00000621790 DBF4Q9UBU7 674 aaPredicted RBP14.93□□□□□ -0.02
TARDBP-226ENST00000621790 SBF2Q86WG5 1849 aa14.93□□□□□ -0.02
TARDBP-226ENST00000621790 ZNF831Q5JPB2 1677 aa14.93□□□□□ -0.02
TARDBP-226ENST00000621790 RNF123Q5XPI4 1314 aa14.92□□□□□ -0.02
TARDBP-226ENST00000621790 LOC102724428A0A0B4J2F2 783 aa14.92□□□□□ -0.02
TARDBP-226ENST00000621790 MS4A1P11836 297 aa14.92□□□□□ -0.02
TARDBP-226ENST00000621790 SIK1P57059 783 aa14.92□□□□□ -0.02
TARDBP-226ENST00000621790 SSH1Q8WYL5 1049 aa14.92□□□□□ -0.02
TARDBP-226ENST00000621790 ARHGAP45Q92619 1136 aa14.92□□□□□ -0.02
TARDBP-226ENST00000621790 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
TARDBP-226ENST00000621790 PLSCR1O15162 318 aa14.91□□□□□ -0.02
TARDBP-226ENST00000621790 TRIM37O94972 964 aa14.91□□□□□ -0.02
TARDBP-226ENST00000621790 HYPKQ9NX55 129 aa14.91□□□□□ -0.02
TARDBP-226ENST00000621790 CICQ96RK0 1608 aaPredicted RBP14.91□□□□□ -0.02
TARDBP-226ENST00000621790 SLC4A2P04920 1241 aa14.9□□□□□ -0.02
TARDBP-226ENST00000621790 EIF2S2P20042 333 aaKnown RBP14.9□□□□□ -0.02
TARDBP-226ENST00000621790 SLC27A3Q5K4L6 730 aa14.9□□□□□ -0.02
TARDBP-226ENST00000621790 MRPL50Q8N5N7 158 aaKnown RBP14.9□□□□□ -0.02
TARDBP-226ENST00000621790 DDX21Q9NR30 783 aaKnown RBP eCLIP14.9□□□□□ -0.02
TARDBP-226ENST00000621790 SUPT16HQ9Y5B9 1047 aaKnown RBP14.9□□□□□ -0.02
TARDBP-226ENST00000621790 USP16Q9Y5T5 823 aa14.9□□□□□ -0.02
TARDBP-226ENST00000621790 PTPRCP08575 1304 aa14.9□□□□□ -0.02
TARDBP-226ENST00000621790 BTAF1O14981 1849 aa14.89□□□□□ -0.03
TARDBP-226ENST00000621790 CACNA1FO60840 1977 aa14.89□□□□□ -0.03
TARDBP-226ENST00000621790 BCAR3O75815 825 aa14.89□□□□□ -0.03
TARDBP-226ENST00000621790 ATP6V1AP38606 617 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms