RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 ABCC6O95255 1503 aa3.46□□□□□ -1.86
CPNE3-211ENST00000621526 GNPATO15228 680 aa3.46□□□□□ -1.86
CPNE3-211ENST00000621526 SOX12O15370 315 aa3.46□□□□□ -1.86
CPNE3-211ENST00000621526 DDNO94850 711 aaPredicted RBP3.46□□□□□ -1.86
CPNE3-211ENST00000621526 POTEIP0CG38 1075 aa3.46□□□□□ -1.86
CPNE3-211ENST00000621526 POTEJP0CG39 1038 aa3.46□□□□□ -1.86
CPNE3-211ENST00000621526 ATP6V1AP38606 617 aa3.46□□□□□ -1.86
CPNE3-211ENST00000621526 BRPF1P55201 1214 aaPredicted RBP3.46□□□□□ -1.86
CPNE3-211ENST00000621526 PKN2Q16513 984 aaKnown RBP3.46□□□□□ -1.86
CPNE3-211ENST00000621526 ERFEQ4G0M1 354 aa3.46□□□□□ -1.86
CPNE3-211ENST00000621526 LINC00116Q8NCU8 138 aa3.46□□□□□ -1.86
CPNE3-211ENST00000621526 RAPGEF4Q8WZA2 1011 aa3.46□□□□□ -1.86
CPNE3-211ENST00000621526 CAPNS2Q96L46 248 aa3.46□□□□□ -1.86
CPNE3-211ENST00000621526 DDX21Q9NR30 783 aaKnown RBP eCLIP3.46□□□□□ -1.86
CPNE3-211ENST00000621526 KAT6BQ8WYB5 2073 aa3.46□□□□□ -1.86
CPNE3-211ENST00000621526 CRYBG1Q9Y4K1 1723 aa3.46□□□□□ -1.86
CPNE3-211ENST00000621526 KIF1BO60333 1816 aa3.46□□□□□ -1.86
CPNE3-211ENST00000621526 ADGRB1O14514 1584 aa3.46□□□□□ -1.86
CPNE3-211ENST00000621526 RGPD8O14715 1765 aaPredicted RBP3.46□□□□□ -1.86
CPNE3-211ENST00000621526 PDE4DIPQ5VU43 2346 aa3.45□□□□□ -1.86
CPNE3-211ENST00000621526 EVC2Q86UK5 1308 aa3.45□□□□□ -1.86
CPNE3-211ENST00000621526 LTBP3Q9NS15 1303 aa3.45□□□□□ -1.86
CPNE3-211ENST00000621526 TNRC18O15417 2968 aaPredicted RBP3.45□□□□□ -1.86
CPNE3-211ENST00000621526 QSER1Q2KHR3 1735 aa3.45□□□□□ -1.86
CPNE3-211ENST00000621526 H0YIN7 160 aa3.45□□□□□ -1.86
CPNE3-211ENST00000621526 NFKBIEO00221 500 aa3.45□□□□□ -1.86
CPNE3-211ENST00000621526 TATP17735 454 aaPredicted RBP3.45□□□□□ -1.86
CPNE3-211ENST00000621526 CHRNA5P30532 468 aa3.45□□□□□ -1.86
CPNE3-211ENST00000621526 FXR1P51114 621 aaKnown RBP eCLIP3.45□□□□□ -1.86
CPNE3-211ENST00000621526 ITPK1Q13572 414 aa3.45□□□□□ -1.86
CPNE3-211ENST00000621526 SLC17A8Q8NDX2 589 aa3.45□□□□□ -1.86
CPNE3-211ENST00000621526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.45□□□□□ -1.86
CPNE3-211ENST00000621526 ABT1Q9ULW3 272 aaKnown RBP3.45□□□□□ -1.86
CPNE3-211ENST00000621526 CLEC11AQ9Y240 323 aa3.45□□□□□ -1.86
CPNE3-211ENST00000621526 NHSQ6T4R5 1651 aa3.45□□□□□ -1.86
CPNE3-211ENST00000621526 PPLO60437 1756 aa3.45□□□□□ -1.86
CPNE3-211ENST00000621526 COL18A1P39060 1754 aa3.45□□□□□ -1.86
CPNE3-211ENST00000621526 PITPNM2Q9BZ72 1349 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 CENPJQ9HC77 1338 aaPredicted RBP3.44□□□□□ -1.86
CPNE3-211ENST00000621526 TRPM1Q7Z4N2 1603 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 TOPAZ1Q8N9V7 1692 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 POLRMTO00411 1230 aaKnown RBP3.44□□□□□ -1.86
CPNE3-211ENST00000621526 CYP27B1O15528 508 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 EPHX2P34913 555 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 RASSF7Q02833 373 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 SOGA3Q5TF21 947 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 NBPF6Q5VWK0 638 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 CST9Q5W186 159 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 NBPF4Q96M43 638 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 ATG3Q9NT62 314 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 SAGE1Q9NXZ1 904 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 ZNF219Q9P2Y4 722 aaPredicted RBP3.44□□□□□ -1.86
CPNE3-211ENST00000621526 HACL1Q9UJ83 578 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 ASAP1Q9ULH1 1129 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 TLL2Q9Y6L7 1015 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 PCDH11XQ9BZA7 1347 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 PCDH11YQ9BZA8 1340 aa3.44□□□□□ -1.86
CPNE3-211ENST00000621526 CD163L1Q9NR16 1453 aa3.43□□□□□ -1.86
CPNE3-211ENST00000621526 ERVV-2B6SEH9 535 aa3.43□□□□□ -1.86
CPNE3-211ENST00000621526 HOXC9P31274 260 aa3.43□□□□□ -1.86
CPNE3-211ENST00000621526 AMPHP49418 695 aa3.43□□□□□ -1.86
CPNE3-211ENST00000621526 MNX1P50219 401 aaPredicted RBP3.43□□□□□ -1.86
CPNE3-211ENST00000621526 SOX10P56693 466 aa3.43□□□□□ -1.86
CPNE3-211ENST00000621526 DDR1Q08345 913 aa3.43□□□□□ -1.86
CPNE3-211ENST00000621526 NOGQ13253 232 aa3.43□□□□□ -1.86
CPNE3-211ENST00000621526 FKBP8Q14318 412 aa3.43□□□□□ -1.86
CPNE3-211ENST00000621526 AKAP4Q5JQC9 854 aa3.43□□□□□ -1.86
CPNE3-211ENST00000621526 MAP1SQ66K74 1059 aaPredicted RBP3.43□□□□□ -1.86
CPNE3-211ENST00000621526 CYP4F22Q6NT55 531 aa3.43□□□□□ -1.86
CPNE3-211ENST00000621526 SAPCD2Q86UD0 394 aa3.43□□□□□ -1.86
CPNE3-211ENST00000621526 REM2Q8IYK8 340 aaPredicted RBP3.43□□□□□ -1.86
CPNE3-211ENST00000621526 LTV1Q96GA3 475 aaPredicted RBP3.43□□□□□ -1.86
CPNE3-211ENST00000621526 PUS7Q96PZ0 661 aaKnown RBP3.43□□□□□ -1.86
CPNE3-211ENST00000621526 BRIP1Q9BX63 1249 aa3.43□□□□□ -1.86
CPNE3-211ENST00000621526 TMOD3Q9NYL9 352 aa3.43□□□□□ -1.86
CPNE3-211ENST00000621526 SPG7Q9UQ90 795 aa3.43□□□□□ -1.86
CPNE3-211ENST00000621526 CNTNAP4Q9C0A0 1308 aa3.43□□□□□ -1.86
CPNE3-211ENST00000621526 IFT172Q9UG01 1749 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 INSRP06213 1382 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 KTN1Q86UP2 1357 aaKnown RBP3.42□□□□□ -1.86
CPNE3-211ENST00000621526 FZD9O00144 591 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 C21orf2O43822 256 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 ZPR1O75312 459 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 SERPINB2P05120 415 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 PDE6BP35913 854 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 EAPPQ56P03 285 aaPredicted RBP3.42□□□□□ -1.86
CPNE3-211ENST00000621526 USP50Q70EL3 339 aaPredicted RBP3.42□□□□□ -1.86
CPNE3-211ENST00000621526 CTU1Q7Z7A3 348 aaKnown RBP3.42□□□□□ -1.86
CPNE3-211ENST00000621526 NME9Q86XW9 330 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 C2CD5Q86YS7 1000 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.42□□□□□ -1.86
CPNE3-211ENST00000621526 GPC2Q8N158 579 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 C7orf43Q8WVR3 580 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 CNKSR1Q969H4 720 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 SLC4A9Q96Q91 983 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 TAOK3Q9H2K8 898 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 PGAP2Q9UHJ9 254 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 TSKSQ9UJT2 592 aa3.42□□□□□ -1.86
CPNE3-211ENST00000621526 SMG6Q86US8 1419 aaKnown RBP3.42□□□□□ -1.86
CPNE3-211ENST00000621526 USP42Q9H9J4 1324 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms