RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 MAPK8IP3Q9UPT6 1336 aa18.97■□□□□ 0.63
CBWD3-217ENST00000621474 CABP4P57796 275 aa18.97■□□□□ 0.63
CBWD3-217ENST00000621474 RUNDC1Q96C34 613 aa18.97■□□□□ 0.63
CBWD3-217ENST00000621474 LRRC4BQ9NT99 713 aa18.97■□□□□ 0.63
CBWD3-217ENST00000621474 ATG3Q9NT62 314 aa18.96■□□□□ 0.63
CBWD3-217ENST00000621474 UBR2Q8IWV8 1755 aa18.96■□□□□ 0.63
CBWD3-217ENST00000621474 DCTN1Q14203 1278 aa18.96■□□□□ 0.63
CBWD3-217ENST00000621474 MCM10Q7L590 875 aa18.96■□□□□ 0.63
CBWD3-217ENST00000621474 NEFMP07197 916 aa18.95■□□□□ 0.62
CBWD3-217ENST00000621474 TMPOP42166 694 aaKnown RBP18.95■□□□□ 0.62
CBWD3-217ENST00000621474 C5P01031 1676 aa18.94■□□□□ 0.62
CBWD3-217ENST00000621474 ZNF831Q5JPB2 1677 aa18.94■□□□□ 0.62
CBWD3-217ENST00000621474 HTATSF1O43719 755 aaKnown RBP18.94■□□□□ 0.62
CBWD3-217ENST00000621474 KCNQ4P56696 695 aa18.94■□□□□ 0.62
CBWD3-217ENST00000621474 RRP7AQ9Y3A4 280 aaKnown RBP18.93■□□□□ 0.62
CBWD3-217ENST00000621474 MIER1Q8N108 512 aa18.92■□□□□ 0.62
CBWD3-217ENST00000621474 KCPQ6ZWJ8 1503 aa18.92■□□□□ 0.62
CBWD3-217ENST00000621474 CICQ96RK0 1608 aaPredicted RBP18.92■□□□□ 0.62
CBWD3-217ENST00000621474 RIPK4P57078 832 aa18.92■□□□□ 0.62
CBWD3-217ENST00000621474 SMARCC1Q92922 1105 aaPredicted RBP18.92■□□□□ 0.62
CBWD3-217ENST00000621474 SLC4A9Q96Q91 983 aa18.92■□□□□ 0.62
CBWD3-217ENST00000621474 ANO8Q9HCE9 1232 aaPredicted RBP18.92■□□□□ 0.62
CBWD3-217ENST00000621474 CCER2I3L3R5 266 aa18.91■□□□□ 0.62
CBWD3-217ENST00000621474 SLC27A3Q5K4L6 730 aa18.91■□□□□ 0.62
CBWD3-217ENST00000621474 RTF1Q92541 710 aaKnown RBP18.91■□□□□ 0.62
CBWD3-217ENST00000621474 THUMPD2Q9BTF0 503 aaKnown RBP18.91■□□□□ 0.62
CBWD3-217ENST00000621474 TUBGCP6Q96RT7 1819 aa18.91■□□□□ 0.62
CBWD3-217ENST00000621474 COL5A3P25940 1745 aaPredicted RBP18.91■□□□□ 0.62
CBWD3-217ENST00000621474 TJP1Q07157 1748 aa18.91■□□□□ 0.62
CBWD3-217ENST00000621474 APAF1O14727 1248 aa18.9■□□□□ 0.62
CBWD3-217ENST00000621474 SLC39A6Q13433 755 aa18.9■□□□□ 0.62
CBWD3-217ENST00000621474 CCNL1Q9UK58 526 aaPredicted RBP18.9■□□□□ 0.62
CBWD3-217ENST00000621474 TRIM35Q9UPQ4 493 aa18.9■□□□□ 0.62
CBWD3-217ENST00000621474 KDM3BQ7LBC6 1761 aa18.9■□□□□ 0.62
CBWD3-217ENST00000621474 LOC102724428A0A0B4J2F2 783 aa18.89■□□□□ 0.62
CBWD3-217ENST00000621474 SIK1P57059 783 aa18.89■□□□□ 0.62
CBWD3-217ENST00000621474 TEFQ10587 303 aa18.89■□□□□ 0.62
CBWD3-217ENST00000621474 SRCAPQ6ZRS2 3230 aa18.89■□□□□ 0.61
CBWD3-217ENST00000621474 NEUROD2Q15784 382 aa18.89■□□□□ 0.61
CBWD3-217ENST00000621474 FAM9BQ8IZU0 186 aa18.89■□□□□ 0.61
CBWD3-217ENST00000621474 C4BP0C0L5 1744 aa18.88■□□□□ 0.61
CBWD3-217ENST00000621474 ITPK1Q13572 414 aa18.87■□□□□ 0.61
CBWD3-217ENST00000621474 MYH14Q7Z406 1995 aaKnown RBP18.86■□□□□ 0.61
CBWD3-217ENST00000621474 ZNF827Q17R98 1081 aa18.86■□□□□ 0.61
CBWD3-217ENST00000621474 QSER1Q2KHR3 1735 aa18.86■□□□□ 0.61
CBWD3-217ENST00000621474 SENP3-EIF4A1A0A087X0R7 540 aa18.85■□□□□ 0.61
CBWD3-217ENST00000621474 KCNQ3O43525 872 aa18.85■□□□□ 0.61
CBWD3-217ENST00000621474 PTCD1O75127 700 aaKnown RBP18.85■□□□□ 0.61
CBWD3-217ENST00000621474 ZNF790Q6PG37 636 aa18.85■□□□□ 0.61
CBWD3-217ENST00000621474 AKT1S1Q96B36 256 aa18.85■□□□□ 0.61
CBWD3-217ENST00000621474 UBR3Q6ZT12 1888 aa18.85■□□□□ 0.61
CBWD3-217ENST00000621474 BTBD11A6QL63 1104 aa18.85■□□□□ 0.61
CBWD3-217ENST00000621474 RBM42Q9BTD8 480 aaKnown RBP18.85■□□□□ 0.61
CBWD3-217ENST00000621474 ATP6V1AP38606 617 aa18.84■□□□□ 0.61
CBWD3-217ENST00000621474 LINC00116Q8NCU8 138 aa18.84■□□□□ 0.61
CBWD3-217ENST00000621474 CASZ1Q86V15 1759 aa18.84■□□□□ 0.61
CBWD3-217ENST00000621474 PSDA5PKW4 1024 aaPredicted RBP18.83■□□□□ 0.61
CBWD3-217ENST00000621474 LMOD3Q0VAK6 560 aa18.83■□□□□ 0.61
CBWD3-217ENST00000621474 R3HDM1Q15032 1099 aaKnown RBP18.83■□□□□ 0.61
CBWD3-217ENST00000621474 TAF7Q15545 349 aaPredicted RBP18.83■□□□□ 0.61
CBWD3-217ENST00000621474 SLC15A2Q16348 729 aa18.83■□□□□ 0.61
CBWD3-217ENST00000621474 ZNF496Q96IT1 587 aaPredicted RBP18.83■□□□□ 0.61
CBWD3-217ENST00000621474 MIS18AQ9NYP9 233 aa18.83■□□□□ 0.61
CBWD3-217ENST00000621474 NBPF14Q5TI25 921 aa18.82■□□□□ 0.6
CBWD3-217ENST00000621474 AMIGO3Q86WK7 504 aa18.81■□□□□ 0.6
CBWD3-217ENST00000621474 HEG1Q9ULI3 1381 aa18.8■□□□□ 0.6
CBWD3-217ENST00000621474 TTC5Q8N0Z6 440 aa18.8■□□□□ 0.6
CBWD3-217ENST00000621474 PDGFDQ9GZP0 370 aaPredicted RBP18.8■□□□□ 0.6
CBWD3-217ENST00000621474 VSIG10Q8N0Z9 540 aa18.79■□□□□ 0.6
CBWD3-217ENST00000621474 STK32BQ9NY57 414 aa18.79■□□□□ 0.6
CBWD3-217ENST00000621474 CCDC27Q2M243 656 aa18.78■□□□□ 0.6
CBWD3-217ENST00000621474 DNAJC10Q8IXB1 793 aa18.78■□□□□ 0.6
CBWD3-217ENST00000621474 PNPLA7Q6ZV29 1317 aa18.78■□□□□ 0.6
CBWD3-217ENST00000621474 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
CBWD3-217ENST00000621474 WWC1Q8IX03 1113 aa18.77■□□□□ 0.6
CBWD3-217ENST00000621474 FMNL2Q96PY5 1086 aa18.77■□□□□ 0.6
CBWD3-217ENST00000621474 LAMB4A4D0S4 1761 aa18.77■□□□□ 0.59
CBWD3-217ENST00000621474 PRAMEF22A3QJZ6 481 aa18.76■□□□□ 0.59
CBWD3-217ENST00000621474 CHL1O00533 1208 aa18.76■□□□□ 0.59
CBWD3-217ENST00000621474 CNTNAP4Q9C0A0 1308 aa18.75■□□□□ 0.59
CBWD3-217ENST00000621474 ZNF853P0CG23 659 aa18.75■□□□□ 0.59
CBWD3-217ENST00000621474 CYP19A1P11511 503 aaPredicted RBP18.75■□□□□ 0.59
CBWD3-217ENST00000621474 EIF4A1P60842 406 aaKnown RBP18.75■□□□□ 0.59
CBWD3-217ENST00000621474 SMIM5Q71RC9 77 aa18.75■□□□□ 0.59
CBWD3-217ENST00000621474 BABAM1Q9NWV8 329 aa18.75■□□□□ 0.59
CBWD3-217ENST00000621474 TFCP2L1Q9NZI6 479 aa18.75■□□□□ 0.59
CBWD3-217ENST00000621474 C4AP0C0L4 1744 aa18.75■□□□□ 0.59
CBWD3-217ENST00000621474 TSPYL4Q9UJ04 414 aa18.74■□□□□ 0.59
CBWD3-217ENST00000621474 CRKLP46109 303 aaKnown RBP18.74■□□□□ 0.59
CBWD3-217ENST00000621474 RC3H1Q5TC82 1133 aaKnown RBP18.74■□□□□ 0.59
CBWD3-217ENST00000621474 INTS5Q6P9B9 1019 aaKnown RBP18.74■□□□□ 0.59
CBWD3-217ENST00000621474 CFAP44Q96MT7 982 aa18.74■□□□□ 0.59
CBWD3-217ENST00000621474 SALL2Q9Y467 1007 aaPredicted RBP18.74■□□□□ 0.59
CBWD3-217ENST00000621474 AK7Q96M32 723 aa18.73■□□□□ 0.59
CBWD3-217ENST00000621474 USP16Q9Y5T5 823 aa18.73■□□□□ 0.59
CBWD3-217ENST00000621474 COL24A1Q17RW2 1714 aa18.72■□□□□ 0.59
CBWD3-217ENST00000621474 ZNF521Q96K83 1311 aa18.72■□□□□ 0.59
CBWD3-217ENST00000621474 GNPATO15228 680 aa18.71■□□□□ 0.59
CBWD3-217ENST00000621474 GIGYF1O75420 1035 aaPredicted RBP18.71■□□□□ 0.59
CBWD3-217ENST00000621474 HMGB2P26583 209 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms