RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 MYBBP1AQ9BQG0 1328 aaKnown RBP11.48□□□□□ -0.57
GTF2I-219ENST00000621040 AKT1S1Q96B36 256 aa11.48□□□□□ -0.57
GTF2I-219ENST00000621040 ERVV-2B6SEH9 535 aa11.47□□□□□ -0.57
GTF2I-219ENST00000621040 SLC27A3Q5K4L6 730 aa11.47□□□□□ -0.57
GTF2I-219ENST00000621040 APBA3O96018 575 aa11.47□□□□□ -0.57
GTF2I-219ENST00000621040 IFNL2Q8IZJ0 200 aa11.47□□□□□ -0.57
GTF2I-219ENST00000621040 BRCA1P38398 1863 aaKnown RBP11.46□□□□□ -0.57
GTF2I-219ENST00000621040 DLEC1Q9Y238 1755 aa11.46□□□□□ -0.57
GTF2I-219ENST00000621040 DCAF5Q96JK2 942 aa11.46□□□□□ -0.58
GTF2I-219ENST00000621040 LRRC4BQ9NT99 713 aa11.46□□□□□ -0.58
GTF2I-219ENST00000621040 AKAP4Q5JQC9 854 aa11.45□□□□□ -0.58
GTF2I-219ENST00000621040 SULT6B1Q6IMI4 303 aa11.45□□□□□ -0.58
GTF2I-219ENST00000621040 PRKRIP1Q9H875 184 aaPredicted RBP11.45□□□□□ -0.58
GTF2I-219ENST00000621040 ANP32CO43423 234 aa11.45□□□□□ -0.58
GTF2I-219ENST00000621040 MAP3K5Q99683 1374 aa11.45□□□□□ -0.58
GTF2I-219ENST00000621040 PLEKHO1Q53GL0 409 aaPredicted RBP11.45□□□□□ -0.58
GTF2I-219ENST00000621040 A0A0G2JS52 829 aa11.44□□□□□ -0.58
GTF2I-219ENST00000621040 FCHSD2O94868 740 aa11.44□□□□□ -0.58
GTF2I-219ENST00000621040 TXNRD1Q16881 649 aa11.44□□□□□ -0.58
GTF2I-219ENST00000621040 PIGBQ92521 554 aa11.44□□□□□ -0.58
GTF2I-219ENST00000621040 PALLDQ8WX93 1383 aa11.44□□□□□ -0.58
GTF2I-219ENST00000621040 PPM1GO15355 546 aaPredicted RBP11.44□□□□□ -0.58
GTF2I-219ENST00000621040 HSP90AB1P08238 724 aaKnown RBP11.44□□□□□ -0.58
GTF2I-219ENST00000621040 SF3B2Q13435 895 aaKnown RBP11.44□□□□□ -0.58
GTF2I-219ENST00000621040 PRIM1P49642 420 aaKnown RBP11.43□□□□□ -0.58
GTF2I-219ENST00000621040 MTHFSDQ2M296 383 aaKnown RBP11.43□□□□□ -0.58
GTF2I-219ENST00000621040 HEG1Q9ULI3 1381 aa11.42□□□□□ -0.58
GTF2I-219ENST00000621040 DDX54Q8TDD1 881 aaKnown RBP11.42□□□□□ -0.58
GTF2I-219ENST00000621040 SGIP1Q9BQI5 828 aa11.42□□□□□ -0.58
GTF2I-219ENST00000621040 HTATSF1O43719 755 aaKnown RBP11.41□□□□□ -0.58
GTF2I-219ENST00000621040 ACSBG1Q96GR2 724 aa11.41□□□□□ -0.58
GTF2I-219ENST00000621040 ATG3Q9NT62 314 aa11.41□□□□□ -0.58
GTF2I-219ENST00000621040 ARFGEF2Q9Y6D5 1785 aa11.41□□□□□ -0.58
GTF2I-219ENST00000621040 SLC4A9Q96Q91 983 aa11.41□□□□□ -0.58
GTF2I-219ENST00000621040 AFDNP55196 1824 aaKnown RBP11.41□□□□□ -0.58
GTF2I-219ENST00000621040 ANKRD36CQ5JPF3 1778 aa11.41□□□□□ -0.58
GTF2I-219ENST00000621040 RNMTO43148 476 aaKnown RBP11.41□□□□□ -0.58
GTF2I-219ENST00000621040 ZNF827Q17R98 1081 aa11.41□□□□□ -0.58
GTF2I-219ENST00000621040 PHACTR3Q96KR7 559 aa11.41□□□□□ -0.58
GTF2I-219ENST00000621040 CFAP53Q96M91 514 aa11.41□□□□□ -0.58
GTF2I-219ENST00000621040 ZNF530Q6P9A1 599 aaPredicted RBP11.4□□□□□ -0.58
GTF2I-219ENST00000621040 SLC52A2Q9HAB3 445 aa11.4□□□□□ -0.59
GTF2I-219ENST00000621040 NCBP3Q53F19 620 aaKnown RBP11.39□□□□□ -0.59
GTF2I-219ENST00000621040 SMARCC1Q92922 1105 aaPredicted RBP11.39□□□□□ -0.59
GTF2I-219ENST00000621040 IRX6P78412 446 aaPredicted RBP11.39□□□□□ -0.59
GTF2I-219ENST00000621040 CNTNAP4Q9C0A0 1308 aa11.38□□□□□ -0.59
GTF2I-219ENST00000621040 SLC15A2Q16348 729 aa11.38□□□□□ -0.59
GTF2I-219ENST00000621040 PNPLA7Q6ZV29 1317 aa11.38□□□□□ -0.59
GTF2I-219ENST00000621040 HMOX1P09601 288 aa11.38□□□□□ -0.59
GTF2I-219ENST00000621040 IL17REQ8NFR9 667 aa11.38□□□□□ -0.59
GTF2I-219ENST00000621040 GAS2L2Q8NHY3 880 aa11.38□□□□□ -0.59
GTF2I-219ENST00000621040 NEFLP07196 543 aa11.38□□□□□ -0.59
GTF2I-219ENST00000621040 KAT6BQ8WYB5 2073 aa11.37□□□□□ -0.59
GTF2I-219ENST00000621040 PRKAR2BP31323 418 aa11.37□□□□□ -0.59
GTF2I-219ENST00000621040 NOP58Q9Y2X3 529 aaKnown RBP11.37□□□□□ -0.59
GTF2I-219ENST00000621040 LGR6Q9HBX8 967 aa11.37□□□□□ -0.59
GTF2I-219ENST00000621040 HMGB2P26583 209 aaKnown RBP11.36□□□□□ -0.59
GTF2I-219ENST00000621040 ITPK1Q13572 414 aa11.36□□□□□ -0.59
GTF2I-219ENST00000621040 RC3H1Q5TC82 1133 aaKnown RBP11.36□□□□□ -0.59
GTF2I-219ENST00000621040 ANKRD31Q8N7Z5 1873 aa11.36□□□□□ -0.59
GTF2I-219ENST00000621040 PTGER2P43116 358 aa11.36□□□□□ -0.59
GTF2I-219ENST00000621040 VSIG10Q8N0Z9 540 aa11.36□□□□□ -0.59
GTF2I-219ENST00000621040 ASAP1Q9ULH1 1129 aa11.36□□□□□ -0.59
GTF2I-219ENST00000621040 NUDCQ9Y266 331 aa11.36□□□□□ -0.59
GTF2I-219ENST00000621040 GNAT3A8MTJ3 354 aa11.35□□□□□ -0.59
GTF2I-219ENST00000621040 LINC00116Q8NCU8 138 aa11.35□□□□□ -0.59
GTF2I-219ENST00000621040 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
GTF2I-219ENST00000621040 TMOD3Q9NYL9 352 aa11.35□□□□□ -0.59
GTF2I-219ENST00000621040 ARFGEF1Q9Y6D6 1849 aa11.35□□□□□ -0.59
GTF2I-219ENST00000621040 HNRNPUQ00839 825 aaKnown RBP eCLIP11.35□□□□□ -0.59
GTF2I-219ENST00000621040 LAMB2P55268 1798 aa11.35□□□□□ -0.59
GTF2I-219ENST00000621040 N4BP2Q86UW6 1770 aaPredicted RBP11.35□□□□□ -0.59
GTF2I-219ENST00000621040 NUP98P52948 1817 aa11.35□□□□□ -0.59
GTF2I-219ENST00000621040 AMIGO3Q86WK7 504 aa11.35□□□□□ -0.59
GTF2I-219ENST00000621040 CACNA1FO60840 1977 aa11.34□□□□□ -0.59
GTF2I-219ENST00000621040 LOC102724428A0A0B4J2F2 783 aa11.34□□□□□ -0.59
GTF2I-219ENST00000621040 SIK1P57059 783 aa11.34□□□□□ -0.59
GTF2I-219ENST00000621040 C1orf141Q5JVX7 400 aa11.34□□□□□ -0.59
GTF2I-219ENST00000621040 GLIPR1L2Q4G1C9 344 aa11.34□□□□□ -0.59
GTF2I-219ENST00000621040 MPRIPQ6WCQ1 1025 aa11.34□□□□□ -0.59
GTF2I-219ENST00000621040 NFE2L2Q16236 605 aa11.33□□□□□ -0.6
GTF2I-219ENST00000621040 NBPF14Q5TI25 921 aa11.33□□□□□ -0.6
GTF2I-219ENST00000621040 R3HDM1Q15032 1099 aaKnown RBP11.33□□□□□ -0.6
GTF2I-219ENST00000621040 CCNL1Q9UK58 526 aaPredicted RBP11.33□□□□□ -0.6
GTF2I-219ENST00000621040 ZMYND15Q9H091 742 aa11.32□□□□□ -0.6
GTF2I-219ENST00000621040 BABAM1Q9NWV8 329 aa11.32□□□□□ -0.6
GTF2I-219ENST00000621040 NFATC2IPQ8NCF5 419 aa11.32□□□□□ -0.6
GTF2I-219ENST00000621040 COL11A2P13942 1736 aaPredicted RBP11.32□□□□□ -0.6
GTF2I-219ENST00000621040 SLC16A10Q8TF71 515 aa11.32□□□□□ -0.6
GTF2I-219ENST00000621040 PDGFDQ9GZP0 370 aaPredicted RBP11.32□□□□□ -0.6
GTF2I-219ENST00000621040 U2AF1L5P0DN76 240 aaPredicted RBP11.31□□□□□ -0.6
GTF2I-219ENST00000621040 SSFA2P28290 1259 aa11.31□□□□□ -0.6
GTF2I-219ENST00000621040 U2AF1Q01081 240 aaKnown RBP eCLIP11.31□□□□□ -0.6
GTF2I-219ENST00000621040 STK32BQ9NY57 414 aa11.31□□□□□ -0.6
GTF2I-219ENST00000621040 U2SURPO15042 1029 aaKnown RBP11.31□□□□□ -0.6
GTF2I-219ENST00000621040 CABP4P57796 275 aa11.31□□□□□ -0.6
GTF2I-219ENST00000621040 NBR1Q14596 966 aa11.31□□□□□ -0.6
GTF2I-219ENST00000621040 INTS5Q6P9B9 1019 aaKnown RBP11.31□□□□□ -0.6
GTF2I-219ENST00000621040 PNISRQ8TF01 805 aaKnown RBP11.31□□□□□ -0.6
GTF2I-219ENST00000621040 PNNQ9H307 717 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms