RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 ERVK-9P63128 1117 aa6.07□□□□□ -1.44
LRRC39-204ENST00000620882 SF3B2Q13435 895 aaKnown RBP6.07□□□□□ -1.44
LRRC39-204ENST00000620882 C9orf131Q5VYM1 1079 aa6.07□□□□□ -1.44
LRRC39-204ENST00000620882 SEPT12Q8IYM1 358 aa6.07□□□□□ -1.44
LRRC39-204ENST00000620882 CHMP7Q8WUX9 453 aaPredicted RBP6.07□□□□□ -1.44
LRRC39-204ENST00000620882 CYLDQ9NQC7 956 aa6.07□□□□□ -1.44
LRRC39-204ENST00000620882 CCDC87Q9NVE4 849 aa6.07□□□□□ -1.44
LRRC39-204ENST00000620882 USP3Q9Y6I4 520 aa6.07□□□□□ -1.44
LRRC39-204ENST00000620882 GDF10P55107 478 aa6.06□□□□□ -1.44
LRRC39-204ENST00000620882 ETNK1Q9HBU6 452 aa6.06□□□□□ -1.44
LRRC39-204ENST00000620882 ZBTB39O15060 712 aa6.06□□□□□ -1.44
LRRC39-204ENST00000620882 TNFRSF10BO14763 440 aa6.05□□□□□ -1.44
LRRC39-204ENST00000620882 PTCD1O75127 700 aaKnown RBP6.05□□□□□ -1.44
LRRC39-204ENST00000620882 NPR3P17342 541 aa6.05□□□□□ -1.44
LRRC39-204ENST00000620882 IGFBP4P22692 258 aa6.05□□□□□ -1.44
LRRC39-204ENST00000620882 TRIM32Q13049 653 aa6.05□□□□□ -1.44
LRRC39-204ENST00000620882 MRPL58Q14197 206 aaKnown RBP6.05□□□□□ -1.44
LRRC39-204ENST00000620882 EAPPQ56P03 285 aaPredicted RBP6.05□□□□□ -1.44
LRRC39-204ENST00000620882 VASH1Q7L8A9 365 aaPredicted RBP6.05□□□□□ -1.44
LRRC39-204ENST00000620882 IL21Q9HBE4 155 aa6.05□□□□□ -1.44
LRRC39-204ENST00000620882 RAB6BQ9NRW1 208 aa6.05□□□□□ -1.44
LRRC39-204ENST00000620882 LRFN2Q9ULH4 789 aa6.05□□□□□ -1.44
LRRC39-204ENST00000620882 MYCP01106 439 aaPredicted RBP6.04□□□□□ -1.44
LRRC39-204ENST00000620882 FSHRP23945 695 aa6.04□□□□□ -1.44
LRRC39-204ENST00000620882 ATCAYQ86WG3 371 aa6.04□□□□□ -1.44
LRRC39-204ENST00000620882 ZNF784Q8NCA9 323 aaPredicted RBP6.04□□□□□ -1.44
LRRC39-204ENST00000620882 TLL2Q9Y6L7 1015 aa6.04□□□□□ -1.44
LRRC39-204ENST00000620882 ATAD2Q6PL18 1390 aa6.04□□□□□ -1.44
LRRC39-204ENST00000620882 GPR182O15218 404 aa6.04□□□□□ -1.44
LRRC39-204ENST00000620882 FZD6O60353 706 aa6.04□□□□□ -1.44
LRRC39-204ENST00000620882 COX20Q5RI15 118 aa6.04□□□□□ -1.44
LRRC39-204ENST00000620882 SH3PXD2AQ5TCZ1 1133 aa6.04□□□□□ -1.44
LRRC39-204ENST00000620882 ZSCAN29Q8IWY8 852 aaPredicted RBP6.04□□□□□ -1.44
LRRC39-204ENST00000620882 COL26A1Q96A83 441 aa6.04□□□□□ -1.44
LRRC39-204ENST00000620882 WWC3Q9ULE0 1092 aa6.04□□□□□ -1.44
LRRC39-204ENST00000620882 TREHO43280 583 aa6.03□□□□□ -1.44
LRRC39-204ENST00000620882 INHAP05111 366 aa6.03□□□□□ -1.44
LRRC39-204ENST00000620882 GRM5P41594 1212 aa6.03□□□□□ -1.44
LRRC39-204ENST00000620882 EIF1AXP47813 144 aaKnown RBP6.03□□□□□ -1.44
LRRC39-204ENST00000620882 FMR1Q06787 632 aaKnown RBP eCLIP6.03□□□□□ -1.44
LRRC39-204ENST00000620882 ARID5BQ14865 1188 aa6.03□□□□□ -1.44
LRRC39-204ENST00000620882 RBCK1Q9BYM8 510 aa6.03□□□□□ -1.44
LRRC39-204ENST00000620882 QTRT2Q9H974 415 aaKnown RBP6.03□□□□□ -1.44
LRRC39-204ENST00000620882 RNF223E7ERA6 249 aa6.02□□□□□ -1.45
LRRC39-204ENST00000620882 FOXO3O43524 673 aa6.02□□□□□ -1.45
LRRC39-204ENST00000620882 LILRA1O75019 489 aa6.02□□□□□ -1.45
LRRC39-204ENST00000620882 ADD1P35611 737 aaKnown RBP6.02□□□□□ -1.45
LRRC39-204ENST00000620882 HDLBPQ00341 1268 aaKnown RBP6.02□□□□□ -1.45
LRRC39-204ENST00000620882 CC2D2BQ6DHV5 1058 aa6.02□□□□□ -1.45
LRRC39-204ENST00000620882 FOXK2Q01167 660 aa6.02□□□□□ -1.45
LRRC39-204ENST00000620882 DSC3Q14574 896 aa6.02□□□□□ -1.45
LRRC39-204ENST00000620882 C16orf46Q6P387 395 aa6.02□□□□□ -1.45
LRRC39-204ENST00000620882 MAP4K5Q9Y4K4 846 aa6.02□□□□□ -1.45
LRRC39-204ENST00000620882 WASLO00401 505 aaPredicted RBP6.01□□□□□ -1.45
LRRC39-204ENST00000620882 NYAP1Q6ZVC0 841 aa6.01□□□□□ -1.45
LRRC39-204ENST00000620882 SLC9A9Q8IVB4 645 aa6.01□□□□□ -1.45
LRRC39-204ENST00000620882 C2orf49Q9BVC5 232 aaPredicted RBP6.01□□□□□ -1.45
LRRC39-204ENST00000620882 CDV3Q9UKY7 258 aaKnown RBP6.01□□□□□ -1.45
LRRC39-204ENST00000620882 TTBK1Q5TCY1 1321 aaPredicted RBP6.01□□□□□ -1.45
LRRC39-204ENST00000620882 FAM13AO94988 1023 aa6□□□□□ -1.45
LRRC39-204ENST00000620882 NR3C2P08235 984 aa6□□□□□ -1.45
LRRC39-204ENST00000620882 MAPK8P45983 427 aa6□□□□□ -1.45
LRRC39-204ENST00000620882 RAD51AP2Q09MP3 1159 aa6□□□□□ -1.45
LRRC39-204ENST00000620882 NAALADL2Q58DX5 795 aa6□□□□□ -1.45
LRRC39-204ENST00000620882 SCHIP1Q9P0W5 487 aaPredicted RBP6□□□□□ -1.45
LRRC39-204ENST00000620882 PPP1R12BO60237 982 aaPredicted RBP6□□□□□ -1.45
LRRC39-204ENST00000620882 EHHADHQ08426 723 aa6□□□□□ -1.45
LRRC39-204ENST00000620882 COL19A1Q14993 1142 aa6□□□□□ -1.45
LRRC39-204ENST00000620882 C8orf37Q96NL8 207 aa6□□□□□ -1.45
LRRC39-204ENST00000620882 SLC4A9Q96Q91 983 aa6□□□□□ -1.45
LRRC39-204ENST00000620882 DUSP9Q99956 384 aaKnown RBP6□□□□□ -1.45
LRRC39-204ENST00000620882 ARHGEF10LQ9HCE6 1279 aa6□□□□□ -1.45
LRRC39-204ENST00000620882 VARSP26640 1264 aaKnown RBP5.99□□□□□ -1.45
LRRC39-204ENST00000620882 ZC3H6P61129 1189 aaKnown RBP5.99□□□□□ -1.45
LRRC39-204ENST00000620882 FAM177A1Q8N128 213 aaPredicted RBP5.99□□□□□ -1.45
LRRC39-204ENST00000620882 SREK1Q8WXA9 508 aaKnown RBP5.99□□□□□ -1.45
LRRC39-204ENST00000620882 PARP2Q9UGN5 583 aa5.99□□□□□ -1.45
LRRC39-204ENST00000620882 NDUFB5O43674 189 aa5.98□□□□□ -1.45
LRRC39-204ENST00000620882 IL2RAP01589 272 aa5.98□□□□□ -1.45
LRRC39-204ENST00000620882 LDHBP07195 334 aaKnown RBP5.98□□□□□ -1.45
LRRC39-204ENST00000620882 PPP1R26Q5T8A7 1209 aaPredicted RBP5.98□□□□□ -1.45
LRRC39-204ENST00000620882 METTL16Q86W50 562 aaKnown RBP5.98□□□□□ -1.45
LRRC39-204ENST00000620882 KDF1Q8NAX2 398 aaPredicted RBP5.98□□□□□ -1.45
LRRC39-204ENST00000620882 EHBP1Q8NDI1 1231 aa5.98□□□□□ -1.45
LRRC39-204ENST00000620882 TMC1Q8TDI8 760 aa5.98□□□□□ -1.45
LRRC39-204ENST00000620882 EMID1Q96A84 441 aaPredicted RBP5.98□□□□□ -1.45
LRRC39-204ENST00000620882 PRKD2Q9BZL6 878 aa5.98□□□□□ -1.45
LRRC39-204ENST00000620882 PPP1R1BQ9UD71 204 aaPredicted RBP5.98□□□□□ -1.45
LRRC39-204ENST00000620882 BRPF3Q9ULD4 1205 aa5.98□□□□□ -1.45
LRRC39-204ENST00000620882 IQSEC3Q9UPP2 1182 aaPredicted RBP5.98□□□□□ -1.45
LRRC39-204ENST00000620882 EIF5BO60841 1220 aaKnown RBP5.98□□□□□ -1.45
LRRC39-204ENST00000620882 ERCC5P28715 1186 aaPredicted RBP5.98□□□□□ -1.45
LRRC39-204ENST00000620882 ETFBKMTQ8IXQ9 262 aa5.98□□□□□ -1.45
LRRC39-204ENST00000620882 ZNF295-AS1Q8N0V1 137 aa5.98□□□□□ -1.45
LRRC39-204ENST00000620882 CDK15Q96Q40 435 aa5.98□□□□□ -1.45
LRRC39-204ENST00000620882 FAM129BQ96TA1 746 aa5.98□□□□□ -1.45
LRRC39-204ENST00000620882 STIM2Q9P246 746 aa5.98□□□□□ -1.45
LRRC39-204ENST00000620882 A6NJY4 79 aa5.97□□□□□ -1.45
LRRC39-204ENST00000620882 BACH1O14867 736 aa5.97□□□□□ -1.45
LRRC39-204ENST00000620882 AAMPQ13685 434 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms