RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 CNKSR1Q969H4 720 aa6.57□□□□□ -1.36
MALAT1-216ENST00000620465 ESYT1Q9BSJ8 1104 aa6.57□□□□□ -1.36
MALAT1-216ENST00000620465 MEN1O00255 615 aa6.56□□□□□ -1.36
MALAT1-216ENST00000620465 FAM69CQ0P6D2 419 aa6.56□□□□□ -1.36
MALAT1-216ENST00000620465 TLR1Q15399 786 aa6.56□□□□□ -1.36
MALAT1-216ENST00000620465 MRPL14Q6P1L8 145 aaKnown RBP6.56□□□□□ -1.36
MALAT1-216ENST00000620465 TSEN2Q8NCE0 465 aaKnown RBP6.56□□□□□ -1.36
MALAT1-216ENST00000620465 CLP1Q92989 425 aaKnown RBP6.56□□□□□ -1.36
MALAT1-216ENST00000620465 XAGE2Q96GT9 111 aa6.56□□□□□ -1.36
MALAT1-216ENST00000620465 NLRP3Q96P20 1036 aa6.56□□□□□ -1.36
MALAT1-216ENST00000620465 SLC4A9Q96Q91 983 aa6.56□□□□□ -1.36
MALAT1-216ENST00000620465 TRAIPQ9BWF2 469 aa6.56□□□□□ -1.36
MALAT1-216ENST00000620465 ZNF395Q9H8N7 513 aaPredicted RBP6.56□□□□□ -1.36
MALAT1-216ENST00000620465 SERTAD1Q9UHV2 236 aa6.56□□□□□ -1.36
MALAT1-216ENST00000620465 SPINT1O43278 529 aa6.55□□□□□ -1.36
MALAT1-216ENST00000620465 BMP2P12643 396 aa6.55□□□□□ -1.36
MALAT1-216ENST00000620465 BMP1P13497 986 aa6.55□□□□□ -1.36
MALAT1-216ENST00000620465 SCARF1Q14162 830 aa6.55□□□□□ -1.36
MALAT1-216ENST00000620465 B4GALNT3Q6L9W6 998 aa6.55□□□□□ -1.36
MALAT1-216ENST00000620465 CARNS1A5YM72 827 aa6.54□□□□□ -1.36
MALAT1-216ENST00000620465 GPC1P35052 558 aa6.54□□□□□ -1.36
MALAT1-216ENST00000620465 SMTNP53814 917 aa6.54□□□□□ -1.36
MALAT1-216ENST00000620465 EPHA4P54764 986 aa6.54□□□□□ -1.36
MALAT1-216ENST00000620465 C6orf118Q5T5N4 469 aa6.54□□□□□ -1.36
MALAT1-216ENST00000620465 NBPF15Q8N660 670 aa6.54□□□□□ -1.36
MALAT1-216ENST00000620465 INSM2Q96T92 566 aaPredicted RBP6.54□□□□□ -1.36
MALAT1-216ENST00000620465 HINFPQ9BQA5 517 aa6.54□□□□□ -1.36
MALAT1-216ENST00000620465 POLMQ9NP87 494 aaPredicted RBP6.54□□□□□ -1.36
MALAT1-216ENST00000620465 HRH3Q9Y5N1 445 aa6.54□□□□□ -1.36
MALAT1-216ENST00000620465 A6NJY4 79 aa6.53□□□□□ -1.36
MALAT1-216ENST00000620465 ST8SIA5O15466 376 aa6.53□□□□□ -1.36
MALAT1-216ENST00000620465 MTFR1Q15390 333 aa6.53□□□□□ -1.36
MALAT1-216ENST00000620465 TRIM46Q7Z4K8 759 aa6.53□□□□□ -1.36
MALAT1-216ENST00000620465 TNS4Q8IZW8 715 aa6.53□□□□□ -1.36
MALAT1-216ENST00000620465 PURBQ96QR8 312 aaKnown RBP6.53□□□□□ -1.36
MALAT1-216ENST00000620465 PRMT3O60678 531 aa6.52□□□□□ -1.37
MALAT1-216ENST00000620465 ATP2B4P23634 1241 aa6.52□□□□□ -1.37
MALAT1-216ENST00000620465 GTF2E1P29083 439 aaPredicted RBP6.52□□□□□ -1.37
MALAT1-216ENST00000620465 CENPCQ03188 943 aa6.52□□□□□ -1.37
MALAT1-216ENST00000620465 FHDC1Q9C0D6 1143 aaPredicted RBP6.52□□□□□ -1.37
MALAT1-216ENST00000620465 TSPAN10Q9H1Z9 355 aaPredicted RBP6.52□□□□□ -1.37
MALAT1-216ENST00000620465 AAASQ9NRG9 546 aa6.52□□□□□ -1.37
MALAT1-216ENST00000620465 SCHIP1Q9P0W5 487 aaPredicted RBP6.52□□□□□ -1.37
MALAT1-216ENST00000620465 BRD1O95696 1058 aa6.51□□□□□ -1.37
MALAT1-216ENST00000620465 WEE1P30291 646 aa6.51□□□□□ -1.37
MALAT1-216ENST00000620465 CTSOP43234 321 aaPredicted RBP6.51□□□□□ -1.37
MALAT1-216ENST00000620465 RNF144AP50876 292 aaPredicted RBP6.51□□□□□ -1.37
MALAT1-216ENST00000620465 FOXK2Q01167 660 aa6.51□□□□□ -1.37
MALAT1-216ENST00000620465 OCLNQ16625 522 aa6.51□□□□□ -1.37
MALAT1-216ENST00000620465 SLC27A3Q5K4L6 730 aa6.51□□□□□ -1.37
MALAT1-216ENST00000620465 FOXD4L5Q5VV16 416 aaPredicted RBP6.51□□□□□ -1.37
MALAT1-216ENST00000620465 SLC9A9Q8IVB4 645 aa6.51□□□□□ -1.37
MALAT1-216ENST00000620465 ZSCAN10Q96SZ4 725 aaPredicted RBP6.51□□□□□ -1.37
MALAT1-216ENST00000620465 ATP13A2Q9NQ11 1180 aa6.51□□□□□ -1.37
MALAT1-216ENST00000620465 TTLL8A6PVC2 850 aa6.5□□□□□ -1.37
MALAT1-216ENST00000620465 CDK2AP1O14519 115 aa6.5□□□□□ -1.37
MALAT1-216ENST00000620465 LGR5O75473 907 aa6.5□□□□□ -1.37
MALAT1-216ENST00000620465 IGFBP4P22692 258 aa6.5□□□□□ -1.37
MALAT1-216ENST00000620465 GNASQ5JWF2 1037 aa6.5□□□□□ -1.37
MALAT1-216ENST00000620465 TMEM214Q6NUQ4 689 aaKnown RBP6.5□□□□□ -1.37
MALAT1-216ENST00000620465 RNF217Q8TC41 542 aa6.5□□□□□ -1.37
MALAT1-216ENST00000620465 SCG3Q8WXD2 468 aaKnown RBP6.5□□□□□ -1.37
MALAT1-216ENST00000620465 PRIMPOLQ96LW4 560 aa6.5□□□□□ -1.37
MALAT1-216ENST00000620465 CXXC1Q9P0U4 656 aaPredicted RBP6.5□□□□□ -1.37
MALAT1-216ENST00000620465 SLAIN2Q9P270 581 aa6.5□□□□□ -1.37
MALAT1-216ENST00000620465 IQSEC3Q9UPP2 1182 aaPredicted RBP6.5□□□□□ -1.37
MALAT1-216ENST00000620465 SSFA2P28290 1259 aa6.49□□□□□ -1.37
MALAT1-216ENST00000620465 PSMA6P60900 246 aaKnown RBP6.49□□□□□ -1.37
MALAT1-216ENST00000620465 Q6ZNB5 142 aa6.49□□□□□ -1.37
MALAT1-216ENST00000620465 PPARGC1BQ86YN6 1023 aaKnown RBP6.49□□□□□ -1.37
MALAT1-216ENST00000620465 KCTD17Q8N5Z5 321 aa6.49□□□□□ -1.37
MALAT1-216ENST00000620465 GAS2L2Q8NHY3 880 aa6.49□□□□□ -1.37
MALAT1-216ENST00000620465 ZFP42Q96MM3 310 aa6.49□□□□□ -1.37
MALAT1-216ENST00000620465 GRIP2Q9C0E4 1043 aa6.49□□□□□ -1.37
MALAT1-216ENST00000620465 CHMP3Q9Y3E7 222 aa6.49□□□□□ -1.37
MALAT1-216ENST00000620465 SOS2Q07890 1332 aaPredicted RBP6.49□□□□□ -1.37
MALAT1-216ENST00000620465 PATL2C9JE40 543 aaKnown RBP6.48□□□□□ -1.37
MALAT1-216ENST00000620465 FOXO3O43524 673 aa6.48□□□□□ -1.37
MALAT1-216ENST00000620465 C21orf2O43822 256 aa6.48□□□□□ -1.37
MALAT1-216ENST00000620465 PPP1R12BO60237 982 aaPredicted RBP6.48□□□□□ -1.37
MALAT1-216ENST00000620465 TBCELQ5QJ74 424 aa6.48□□□□□ -1.37
MALAT1-216ENST00000620465 C1orf216Q8TAB5 229 aa6.48□□□□□ -1.37
MALAT1-216ENST00000620465 RHBDD1Q8TEB9 315 aa6.48□□□□□ -1.37
MALAT1-216ENST00000620465 NIFKQ9BYG3 293 aaKnown RBP6.48□□□□□ -1.37
MALAT1-216ENST00000620465 USP3Q9Y6I4 520 aa6.48□□□□□ -1.37
MALAT1-216ENST00000620465 ATAD2Q6PL18 1390 aa6.47□□□□□ -1.37
MALAT1-216ENST00000620465 KCNA1Q09470 495 aa6.47□□□□□ -1.37
MALAT1-216ENST00000620465 FKBP5Q13451 457 aaPredicted RBP6.47□□□□□ -1.37
MALAT1-216ENST00000620465 LYSMD3Q7Z3D4 306 aa6.47□□□□□ -1.37
MALAT1-216ENST00000620465 ZNF295-AS1Q8N0V1 137 aa6.47□□□□□ -1.37
MALAT1-216ENST00000620465 STAG2Q8N3U4 1231 aa6.47□□□□□ -1.37
MALAT1-216ENST00000620465 SENP2Q9HC62 589 aa6.47□□□□□ -1.37
MALAT1-216ENST00000620465 CABP1Q9NZU7 370 aa6.47□□□□□ -1.37
MALAT1-216ENST00000620465 SPATA31C2B4DYI2 1134 aa6.46□□□□□ -1.38
MALAT1-216ENST00000620465 TEAD4Q15561 434 aa6.46□□□□□ -1.38
MALAT1-216ENST00000620465 PHLDB3Q6NSJ2 640 aa6.46□□□□□ -1.38
MALAT1-216ENST00000620465 TAS1R3Q7RTX0 852 aa6.46□□□□□ -1.38
MALAT1-216ENST00000620465 AEBP1Q8IUX7 1158 aa6.46□□□□□ -1.38
MALAT1-216ENST00000620465 CHMP7Q8WUX9 453 aaPredicted RBP6.46□□□□□ -1.38
MALAT1-216ENST00000620465 KIFC2Q96AC6 838 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms