RNA–Protein interactions for RNA: ENST00000620424.1

SYNRG-228, Transcript of synergin gamma, humanhuman

TSL 3

Gene SYNRG, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-228ENST00000620424 RNMTO43148 476 aaKnown RBP12.69□□□□□ -0.38
SYNRG-228ENST00000620424 ITPK1Q13572 414 aa12.69□□□□□ -0.38
SYNRG-228ENST00000620424 RALBP1Q15311 655 aa12.69□□□□□ -0.38
SYNRG-228ENST00000620424 SMIM5Q71RC9 77 aa12.69□□□□□ -0.38
SYNRG-228ENST00000620424 AMIGO3Q86WK7 504 aa12.69□□□□□ -0.38
SYNRG-228ENST00000620424 NFATC2IPQ8NCF5 419 aa12.69□□□□□ -0.38
SYNRG-228ENST00000620424 SMARCC1Q92922 1105 aaPredicted RBP12.69□□□□□ -0.38
SYNRG-228ENST00000620424 SLC4A9Q96Q91 983 aa12.69□□□□□ -0.38
SYNRG-228ENST00000620424 TUBGCP6Q96RT7 1819 aa12.69□□□□□ -0.38
SYNRG-228ENST00000620424 SCN11AQ9UI33 1791 aa12.69□□□□□ -0.38
SYNRG-228ENST00000620424 PNPLA7Q6ZV29 1317 aa12.68□□□□□ -0.38
SYNRG-228ENST00000620424 C5P01031 1676 aa12.68□□□□□ -0.38
SYNRG-228ENST00000620424 LOC102724428A0A0B4J2F2 783 aa12.68□□□□□ -0.38
SYNRG-228ENST00000620424 SLC4A2P04920 1241 aa12.68□□□□□ -0.38
SYNRG-228ENST00000620424 SIK1P57059 783 aa12.68□□□□□ -0.38
SYNRG-228ENST00000620424 LINC00116Q8NCU8 138 aa12.68□□□□□ -0.38
SYNRG-228ENST00000620424 NUDCQ9Y266 331 aa12.68□□□□□ -0.38
SYNRG-228ENST00000620424 ATF5Q9Y2D1 282 aaPredicted RBP12.68□□□□□ -0.38
SYNRG-228ENST00000620424 ZNF316A6NFI3 1004 aaPredicted RBP12.67□□□□□ -0.38
SYNRG-228ENST00000620424 MAP3K5Q99683 1374 aa12.67□□□□□ -0.38
SYNRG-228ENST00000620424 ADAMTS7Q9UKP4 1686 aa12.67□□□□□ -0.38
SYNRG-228ENST00000620424 TAF1LQ8IZX4 1826 aa12.67□□□□□ -0.38
SYNRG-228ENST00000620424 MRC1P22897 1456 aa12.66□□□□□ -0.38
SYNRG-228ENST00000620424 MYBBP1AQ9BQG0 1328 aaKnown RBP12.66□□□□□ -0.38
SYNRG-228ENST00000620424 IL17REQ8NFR9 667 aa12.66□□□□□ -0.38
SYNRG-228ENST00000620424 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
SYNRG-228ENST00000620424 SLC52A2Q9HAB3 445 aa12.66□□□□□ -0.38
SYNRG-228ENST00000620424 TFCP2L1Q9NZI6 479 aa12.66□□□□□ -0.38
SYNRG-228ENST00000620424 C4BP0C0L5 1744 aa12.65□□□□□ -0.38
SYNRG-228ENST00000620424 PTCD1O75127 700 aaKnown RBP12.65□□□□□ -0.38
SYNRG-228ENST00000620424 FCHSD2O94868 740 aa12.65□□□□□ -0.38
SYNRG-228ENST00000620424 ATP6V1AP38606 617 aa12.65□□□□□ -0.38
SYNRG-228ENST00000620424 PTGER2P43116 358 aa12.65□□□□□ -0.38
SYNRG-228ENST00000620424 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
SYNRG-228ENST00000620424 GAS2L2Q8NHY3 880 aa12.65□□□□□ -0.38
SYNRG-228ENST00000620424 PRKRIP1Q9H875 184 aaPredicted RBP12.65□□□□□ -0.38
SYNRG-228ENST00000620424 SPON1Q9HCB6 807 aa12.65□□□□□ -0.38
SYNRG-228ENST00000620424 VIRMAQ69YN4 1812 aaKnown RBP12.65□□□□□ -0.39
SYNRG-228ENST00000620424 COL23A1Q86Y22 540 aaPredicted RBP12.64□□□□□ -0.39
SYNRG-228ENST00000620424 QSER1Q2KHR3 1735 aa12.63□□□□□ -0.39
SYNRG-228ENST00000620424 GNAT3A8MTJ3 354 aa12.63□□□□□ -0.39
SYNRG-228ENST00000620424 DCTN1Q14203 1278 aa12.63□□□□□ -0.39
SYNRG-228ENST00000620424 PLEKHF1Q96S99 279 aa12.63□□□□□ -0.39
SYNRG-228ENST00000620424 PHF14O94880 888 aa12.62□□□□□ -0.39
SYNRG-228ENST00000620424 MCM10Q7L590 875 aa12.62□□□□□ -0.39
SYNRG-228ENST00000620424 AK7Q96M32 723 aa12.62□□□□□ -0.39
SYNRG-228ENST00000620424 SGIP1Q9BQI5 828 aa12.62□□□□□ -0.39
SYNRG-228ENST00000620424 MTFR1LQ9H019 292 aa12.62□□□□□ -0.39
SYNRG-228ENST00000620424 SRCAPQ6ZRS2 3230 aa12.62□□□□□ -0.39
SYNRG-228ENST00000620424 KCPQ6ZWJ8 1503 aa12.62□□□□□ -0.39
SYNRG-228ENST00000620424 CEMIPQ8WUJ3 1361 aa12.61□□□□□ -0.39
SYNRG-228ENST00000620424 CCDC184Q52MB2 194 aa12.61□□□□□ -0.39
SYNRG-228ENST00000620424 TJP1Q07157 1748 aa12.61□□□□□ -0.39
SYNRG-228ENST00000620424 UBR3Q6ZT12 1888 aa12.61□□□□□ -0.39
SYNRG-228ENST00000620424 COL5A3P25940 1745 aaPredicted RBP12.6□□□□□ -0.39
SYNRG-228ENST00000620424 GNPATO15228 680 aa12.6□□□□□ -0.39
SYNRG-228ENST00000620424 KCNQ3O43525 872 aa12.6□□□□□ -0.39
SYNRG-228ENST00000620424 MSL1Q68DK7 614 aa12.6□□□□□ -0.39
SYNRG-228ENST00000620424 DNAJC10Q8IXB1 793 aa12.6□□□□□ -0.39
SYNRG-228ENST00000620424 SIPA1L3O60292 1781 aaPredicted RBP12.6□□□□□ -0.39
SYNRG-228ENST00000620424 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.59□□□□□ -0.39
SYNRG-228ENST00000620424 TEFQ10587 303 aa12.59□□□□□ -0.39
SYNRG-228ENST00000620424 CCDC146Q8IYE0 955 aa12.59□□□□□ -0.39
SYNRG-228ENST00000620424 THUMPD2Q9BTF0 503 aaKnown RBP12.59□□□□□ -0.39
SYNRG-228ENST00000620424 ZNF831Q5JPB2 1677 aa12.58□□□□□ -0.4
SYNRG-228ENST00000620424 PPP1R1BQ9UD71 204 aaPredicted RBP12.58□□□□□ -0.4
SYNRG-228ENST00000620424 MYH14Q7Z406 1995 aaKnown RBP12.58□□□□□ -0.4
SYNRG-228ENST00000620424 UBR2Q8IWV8 1755 aa12.57□□□□□ -0.4
SYNRG-228ENST00000620424 CRKLP46109 303 aaKnown RBP12.57□□□□□ -0.4
SYNRG-228ENST00000620424 C1QBPQ07021 282 aaKnown RBP12.57□□□□□ -0.4
SYNRG-228ENST00000620424 NFE2L2Q16236 605 aa12.57□□□□□ -0.4
SYNRG-228ENST00000620424 ZNF496Q96IT1 587 aaPredicted RBP12.57□□□□□ -0.4
SYNRG-228ENST00000620424 U3KPZ7 1027 aaPredicted RBP12.57□□□□□ -0.4
SYNRG-228ENST00000620424 CNTNAP4Q9C0A0 1308 aa12.57□□□□□ -0.4
SYNRG-228ENST00000620424 COL24A1Q17RW2 1714 aa12.57□□□□□ -0.4
SYNRG-228ENST00000620424 DLG5Q8TDM6 1919 aa12.56□□□□□ -0.4
SYNRG-228ENST00000620424 CICQ96RK0 1608 aaPredicted RBP12.56□□□□□ -0.4
SYNRG-228ENST00000620424 SSFA2P28290 1259 aa12.56□□□□□ -0.4
SYNRG-228ENST00000620424 INTS5Q6P9B9 1019 aaKnown RBP12.56□□□□□ -0.4
SYNRG-228ENST00000620424 ZNF790Q6PG37 636 aa12.56□□□□□ -0.4
SYNRG-228ENST00000620424 SLC16A10Q8TF71 515 aa12.56□□□□□ -0.4
SYNRG-228ENST00000620424 RTF1Q92541 710 aaKnown RBP12.56□□□□□ -0.4
SYNRG-228ENST00000620424 MIS18AQ9NYP9 233 aa12.56□□□□□ -0.4
SYNRG-228ENST00000620424 ADAMTS8Q9UP79 889 aa12.56□□□□□ -0.4
SYNRG-228ENST00000620424 RRP7AQ9Y3A4 280 aaKnown RBP12.56□□□□□ -0.4
SYNRG-228ENST00000620424 BTBD11A6QL63 1104 aa12.55□□□□□ -0.4
SYNRG-228ENST00000620424 RPS6KA4O75676 772 aa12.55□□□□□ -0.4
SYNRG-228ENST00000620424 CYP19A1P11511 503 aaPredicted RBP12.55□□□□□ -0.4
SYNRG-228ENST00000620424 RC3H1Q5TC82 1133 aaKnown RBP12.55□□□□□ -0.4
SYNRG-228ENST00000620424 ARXQ96QS3 562 aa12.55□□□□□ -0.4
SYNRG-228ENST00000620424 FHDC1Q9C0D6 1143 aaPredicted RBP12.55□□□□□ -0.4
SYNRG-228ENST00000620424 MAPK8IP3Q9UPT6 1336 aa12.55□□□□□ -0.4
SYNRG-228ENST00000620424 PRAMEF22A3QJZ6 481 aa12.54□□□□□ -0.4
SYNRG-228ENST00000620424 HTATSF1O43719 755 aaKnown RBP12.54□□□□□ -0.4
SYNRG-228ENST00000620424 WDR43Q15061 677 aaKnown RBP eCLIP12.54□□□□□ -0.4
SYNRG-228ENST00000620424 TTC5Q8N0Z6 440 aa12.54□□□□□ -0.4
SYNRG-228ENST00000620424 FLAD1Q8NFF5 587 aa12.54□□□□□ -0.4
SYNRG-228ENST00000620424 ARHGEF1Q92888 912 aaKnown RBP12.54□□□□□ -0.4
SYNRG-228ENST00000620424 CCDC87Q9NVE4 849 aa12.54□□□□□ -0.4
SYNRG-228ENST00000620424 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms