RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 SIGLEC1Q9BZZ2 1709 aa10.52□□□□□ -0.73
C9orf72-206ENST00000619707 MAP2P11137 1827 aaKnown RBP10.52□□□□□ -0.73
C9orf72-206ENST00000619707 IDI1Q13907 227 aa10.51□□□□□ -0.73
C9orf72-206ENST00000619707 ESYT1Q9BSJ8 1104 aa10.51□□□□□ -0.73
C9orf72-206ENST00000619707 WDR33Q9C0J8 1336 aaKnown RBP10.51□□□□□ -0.73
C9orf72-206ENST00000619707 CPSF1Q10570 1443 aaKnown RBP10.51□□□□□ -0.73
C9orf72-206ENST00000619707 GADD45BO75293 160 aaPredicted RBP10.51□□□□□ -0.73
C9orf72-206ENST00000619707 ANAPC15P60006 121 aa10.51□□□□□ -0.73
C9orf72-206ENST00000619707 USP48Q86UV5 1035 aa10.51□□□□□ -0.73
C9orf72-206ENST00000619707 ANO2Q9NQ90 1003 aa10.51□□□□□ -0.73
C9orf72-206ENST00000619707 DLG5Q8TDM6 1919 aa10.51□□□□□ -0.73
C9orf72-206ENST00000619707 RGS12O14924 1447 aa10.51□□□□□ -0.73
C9orf72-206ENST00000619707 PTPRCP08575 1304 aa10.51□□□□□ -0.73
C9orf72-206ENST00000619707 DMTNQ08495 405 aa10.51□□□□□ -0.73
C9orf72-206ENST00000619707 UTP14CQ5TAP6 766 aaKnown RBP10.51□□□□□ -0.73
C9orf72-206ENST00000619707 ZHX1Q9UKY1 873 aaPredicted RBP10.51□□□□□ -0.73
C9orf72-206ENST00000619707 ADCY5O95622 1261 aa10.5□□□□□ -0.73
C9orf72-206ENST00000619707 GTF2F1P35269 517 aaKnown RBP eCLIP10.5□□□□□ -0.73
C9orf72-206ENST00000619707 KRT24Q2M2I5 525 aa10.5□□□□□ -0.73
C9orf72-206ENST00000619707 CCDC183Q5T5S1 534 aa10.5□□□□□ -0.73
C9orf72-206ENST00000619707 TTC12Q9H892 705 aaPredicted RBP10.5□□□□□ -0.73
C9orf72-206ENST00000619707 KIF3AQ9Y496 699 aa10.5□□□□□ -0.73
C9orf72-206ENST00000619707 CDK12Q9NYV4 1490 aaPredicted RBP10.5□□□□□ -0.73
C9orf72-206ENST00000619707 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.5□□□□□ -0.73
C9orf72-206ENST00000619707 TSC1Q92574 1164 aa10.5□□□□□ -0.73
C9orf72-206ENST00000619707 JARID2Q92833 1246 aaPredicted RBP10.5□□□□□ -0.73
C9orf72-206ENST00000619707 PALD1Q9ULE6 856 aa10.5□□□□□ -0.73
C9orf72-206ENST00000619707 POGZQ7Z3K3 1410 aa10.5□□□□□ -0.73
C9orf72-206ENST00000619707 MLH3Q9UHC1 1453 aa10.49□□□□□ -0.73
C9orf72-206ENST00000619707 LETM1O95202 739 aaPredicted RBP10.49□□□□□ -0.73
C9orf72-206ENST00000619707 PLCB2Q00722 1185 aa10.49□□□□□ -0.73
C9orf72-206ENST00000619707 ZNF710Q8N1W2 664 aa10.49□□□□□ -0.73
C9orf72-206ENST00000619707 SLC52A1Q9NWF4 448 aa10.49□□□□□ -0.73
C9orf72-206ENST00000619707 BCCIPQ9P287 314 aaKnown RBP eCLIP10.49□□□□□ -0.73
C9orf72-206ENST00000619707 ATP7BP35670 1465 aa10.49□□□□□ -0.73
C9orf72-206ENST00000619707 TRIM6-TRIM34B2RNG4 842 aa10.48□□□□□ -0.73
C9orf72-206ENST00000619707 TSHZ3Q63HK5 1081 aa10.48□□□□□ -0.73
C9orf72-206ENST00000619707 C17orf53Q8N3J3 647 aaPredicted RBP10.48□□□□□ -0.73
C9orf72-206ENST00000619707 RILPL2Q969X0 211 aa10.48□□□□□ -0.73
C9orf72-206ENST00000619707 UPF3BQ9BZI7 483 aaKnown RBP10.48□□□□□ -0.73
C9orf72-206ENST00000619707 CCDC9Q9Y3X0 531 aaKnown RBP10.48□□□□□ -0.73
C9orf72-206ENST00000619707 HCLS1P14317 486 aaPredicted RBP10.48□□□□□ -0.73
C9orf72-206ENST00000619707 ZSCAN20P17040 1043 aaPredicted RBP10.48□□□□□ -0.73
C9orf72-206ENST00000619707 CBX1P83916 185 aa10.48□□□□□ -0.73
C9orf72-206ENST00000619707 FKBP5Q13451 457 aaPredicted RBP10.48□□□□□ -0.73
C9orf72-206ENST00000619707 MX1P20591 662 aa10.48□□□□□ -0.73
C9orf72-206ENST00000619707 CHAF1AQ13111 956 aaPredicted RBP10.48□□□□□ -0.73
C9orf72-206ENST00000619707 PPP4R3BQ5MIZ7 849 aa10.48□□□□□ -0.73
C9orf72-206ENST00000619707 SLC4A10Q6U841 1118 aa10.48□□□□□ -0.73
C9orf72-206ENST00000619707 NME9Q86XW9 330 aa10.48□□□□□ -0.73
C9orf72-206ENST00000619707 SPTLC3Q9NUV7 552 aa10.48□□□□□ -0.73
C9orf72-206ENST00000619707 EXOC6BQ9Y2D4 811 aa10.48□□□□□ -0.73
C9orf72-206ENST00000619707 SSH2Q76I76 1423 aa10.47□□□□□ -0.73
C9orf72-206ENST00000619707 SECISBP2LQ93073 1101 aaKnown RBP10.47□□□□□ -0.73
C9orf72-206ENST00000619707 SLC4A2P04920 1241 aa10.47□□□□□ -0.73
C9orf72-206ENST00000619707 CHMLP26374 656 aa10.47□□□□□ -0.73
C9orf72-206ENST00000619707 TMEM87AQ8NBN3 555 aa10.47□□□□□ -0.73
C9orf72-206ENST00000619707 LRRCC1Q9C099 1032 aa10.47□□□□□ -0.73
C9orf72-206ENST00000619707 SRCIN1Q9C0H9 1055 aa10.47□□□□□ -0.73
C9orf72-206ENST00000619707 KIAA0232Q92628 1395 aa10.47□□□□□ -0.73
C9orf72-206ENST00000619707 RRS1Q15050 365 aaKnown RBP10.46□□□□□ -0.73
C9orf72-206ENST00000619707 COG3Q96JB2 828 aa10.46□□□□□ -0.73
C9orf72-206ENST00000619707 AATKQ6ZMQ8 1374 aa10.46□□□□□ -0.73
C9orf72-206ENST00000619707 CHL1O00533 1208 aa10.46□□□□□ -0.73
C9orf72-206ENST00000619707 KDM4AO75164 1064 aa10.46□□□□□ -0.73
C9orf72-206ENST00000619707 CCT4P50991 539 aaKnown RBP10.46□□□□□ -0.73
C9orf72-206ENST00000619707 GTPBP4Q9BZE4 634 aaKnown RBP10.46□□□□□ -0.73
C9orf72-206ENST00000619707 DIAPH3Q9NSV4 1193 aa10.46□□□□□ -0.73
C9orf72-206ENST00000619707 CNPY2Q9Y2B0 182 aa10.46□□□□□ -0.73
C9orf72-206ENST00000619707 EDC4Q6P2E9 1401 aaKnown RBP10.46□□□□□ -0.74
C9orf72-206ENST00000619707 FAM177BA6PVY3 158 aa10.46□□□□□ -0.74
C9orf72-206ENST00000619707 GNAI2P04899 355 aa10.46□□□□□ -0.74
C9orf72-206ENST00000619707 UBE2HP62256 183 aa10.46□□□□□ -0.74
C9orf72-206ENST00000619707 MYO5BQ9ULV0 1848 aa10.45□□□□□ -0.74
C9orf72-206ENST00000619707 PDCL2Q8N4E4 241 aa10.45□□□□□ -0.74
C9orf72-206ENST00000619707 BCL2L12Q9HB09 334 aa10.45□□□□□ -0.74
C9orf72-206ENST00000619707 ZRANB1Q9UGI0 708 aa10.45□□□□□ -0.74
C9orf72-206ENST00000619707 MCM10Q7L590 875 aa10.45□□□□□ -0.74
C9orf72-206ENST00000619707 SALL3Q9BXA9 1300 aa10.45□□□□□ -0.74
C9orf72-206ENST00000619707 TPM3P06753 285 aa10.45□□□□□ -0.74
C9orf72-206ENST00000619707 ZSCAN22P10073 491 aaPredicted RBP10.45□□□□□ -0.74
C9orf72-206ENST00000619707 RPAP1Q9BWH6 1393 aaPredicted RBP10.44□□□□□ -0.74
C9orf72-206ENST00000619707 F6X3S4 739 aa10.44□□□□□ -0.74
C9orf72-206ENST00000619707 ATP6V1DQ9Y5K8 247 aa10.44□□□□□ -0.74
C9orf72-206ENST00000619707 TCHHQ07283 1943 aa10.44□□□□□ -0.74
C9orf72-206ENST00000619707 ALKQ9UM73 1620 aa10.44□□□□□ -0.74
C9orf72-206ENST00000619707 GOLGA6L6A8MZA4 724 aa10.44□□□□□ -0.74
C9orf72-206ENST00000619707 ATP2B3Q16720 1220 aa10.44□□□□□ -0.74
C9orf72-206ENST00000619707 SULT6B1Q6IMI4 303 aa10.44□□□□□ -0.74
C9orf72-206ENST00000619707 WAPLQ7Z5K2 1190 aa10.44□□□□□ -0.74
C9orf72-206ENST00000619707 IL17RAQ96F46 866 aa10.44□□□□□ -0.74
C9orf72-206ENST00000619707 FIBPO43427 364 aa10.43□□□□□ -0.74
C9orf72-206ENST00000619707 AEBP1Q8IUX7 1158 aa10.43□□□□□ -0.74
C9orf72-206ENST00000619707 KIAA1524Q8TCG1 905 aa10.43□□□□□ -0.74
C9orf72-206ENST00000619707 TMEM131LA2VDJ0 1609 aa10.43□□□□□ -0.74
C9orf72-206ENST00000619707 EPB41L2O43491 1005 aaKnown RBP10.43□□□□□ -0.74
C9orf72-206ENST00000619707 STX6O43752 255 aa10.43□□□□□ -0.74
C9orf72-206ENST00000619707 HSPA4P34932 840 aa10.43□□□□□ -0.74
C9orf72-206ENST00000619707 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.43□□□□□ -0.74
C9orf72-206ENST00000619707 RIOK3O14730 519 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms