RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 NOS1P29475 1434 aa12.96□□□□□ -0.33
HNF4A-209ENST00000619550 NUTM2BA6NNL0 878 aaPredicted RBP12.96□□□□□ -0.34
HNF4A-209ENST00000619550 NUTM2EB1AL46 878 aaPredicted RBP12.96□□□□□ -0.34
HNF4A-209ENST00000619550 MAPK8IP2Q13387 824 aaPredicted RBP12.96□□□□□ -0.34
HNF4A-209ENST00000619550 BMS1Q14692 1282 aaKnown RBP12.96□□□□□ -0.34
HNF4A-209ENST00000619550 NUTM2AQ8IVF1 878 aaPredicted RBP12.96□□□□□ -0.34
HNF4A-209ENST00000619550 SPATA32Q96LK8 384 aa12.96□□□□□ -0.34
HNF4A-209ENST00000619550 TNNT1P13805 278 aa12.96□□□□□ -0.34
HNF4A-209ENST00000619550 GABPB1Q06547 395 aaPredicted RBP12.96□□□□□ -0.34
HNF4A-209ENST00000619550 DDX54Q8TDD1 881 aaKnown RBP12.96□□□□□ -0.34
HNF4A-209ENST00000619550 NEUROD6Q96NK8 337 aa12.96□□□□□ -0.34
HNF4A-209ENST00000619550 PAXBP1Q9Y5B6 917 aa12.96□□□□□ -0.34
HNF4A-209ENST00000619550 FILIP1Q7Z7B0 1213 aa12.95□□□□□ -0.34
HNF4A-209ENST00000619550 PDILTQ8N807 584 aa12.95□□□□□ -0.34
HNF4A-209ENST00000619550 CCDC191Q8NCU4 936 aa12.95□□□□□ -0.34
HNF4A-209ENST00000619550 UBXN4Q92575 508 aa12.95□□□□□ -0.34
HNF4A-209ENST00000619550 OGFRQ9NZT2 677 aa12.95□□□□□ -0.34
HNF4A-209ENST00000619550 TCOF1Q13428 1488 aaKnown RBP12.95□□□□□ -0.34
HNF4A-209ENST00000619550 KIAA0754O94854 1291 aa12.95□□□□□ -0.34
HNF4A-209ENST00000619550 KIF18AQ8NI77 898 aa12.95□□□□□ -0.34
HNF4A-209ENST00000619550 NOL7Q9UMY1 257 aaKnown RBP12.95□□□□□ -0.34
HNF4A-209ENST00000619550 ABCC2Q92887 1545 aa12.95□□□□□ -0.34
HNF4A-209ENST00000619550 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
HNF4A-209ENST00000619550 SLC4A2P04920 1241 aa12.94□□□□□ -0.34
HNF4A-209ENST00000619550 ZC3H6P61129 1189 aaKnown RBP12.94□□□□□ -0.34
HNF4A-209ENST00000619550 DCTN1Q14203 1278 aa12.94□□□□□ -0.34
HNF4A-209ENST00000619550 AXDND1Q5T1B0 1012 aaPredicted RBP12.94□□□□□ -0.34
HNF4A-209ENST00000619550 FMNL2Q96PY5 1086 aa12.94□□□□□ -0.34
HNF4A-209ENST00000619550 FOSBP53539 338 aa12.94□□□□□ -0.34
HNF4A-209ENST00000619550 RRS1Q15050 365 aaKnown RBP12.94□□□□□ -0.34
HNF4A-209ENST00000619550 ERICH2A1L162 156 aa12.94□□□□□ -0.34
HNF4A-209ENST00000619550 PRIM1P49642 420 aaKnown RBP12.94□□□□□ -0.34
HNF4A-209ENST00000619550 CEP57L1Q8IYX8 460 aa12.94□□□□□ -0.34
HNF4A-209ENST00000619550 TBC1D2BQ9UPU7 963 aa12.94□□□□□ -0.34
HNF4A-209ENST00000619550 GNAT3A8MTJ3 354 aa12.93□□□□□ -0.34
HNF4A-209ENST00000619550 INSRP06213 1382 aa12.93□□□□□ -0.34
HNF4A-209ENST00000619550 NEMFO60524 1076 aa12.93□□□□□ -0.34
HNF4A-209ENST00000619550 PDRG1Q9NUG6 133 aa12.93□□□□□ -0.34
HNF4A-209ENST00000619550 FSD1Q9BTV5 496 aa12.93□□□□□ -0.34
HNF4A-209ENST00000619550 UPF3BQ9BZI7 483 aaKnown RBP12.93□□□□□ -0.34
HNF4A-209ENST00000619550 CFAP45Q9UL16 551 aa12.93□□□□□ -0.34
HNF4A-209ENST00000619550 RALYLQ86SE5 291 aaKnown RBP12.92□□□□□ -0.34
HNF4A-209ENST00000619550 CTDP1Q9Y5B0 961 aaPredicted RBP12.92□□□□□ -0.34
HNF4A-209ENST00000619550 TTC21BQ7Z4L5 1316 aa12.92□□□□□ -0.34
HNF4A-209ENST00000619550 FOXO3O43524 673 aa12.92□□□□□ -0.34
HNF4A-209ENST00000619550 BRD2P25440 801 aaKnown RBP12.92□□□□□ -0.34
HNF4A-209ENST00000619550 IPO4Q8TEX9 1081 aaKnown RBP12.92□□□□□ -0.34
HNF4A-209ENST00000619550 C16orf45Q96MC5 204 aaPredicted RBP12.92□□□□□ -0.34
HNF4A-209ENST00000619550 SHANK2Q9UPX8 1470 aa12.92□□□□□ -0.34
HNF4A-209ENST00000619550 PIP4K2BP78356 416 aa12.92□□□□□ -0.34
HNF4A-209ENST00000619550 PUS7Q96PZ0 661 aaKnown RBP12.92□□□□□ -0.34
HNF4A-209ENST00000619550 GNL3LQ9NVN8 582 aaKnown RBP12.92□□□□□ -0.34
HNF4A-209ENST00000619550 SCAND2PQ9GZW5 306 aaPredicted RBP12.91□□□□□ -0.34
HNF4A-209ENST00000619550 STARD3NLO95772 234 aa12.91□□□□□ -0.34
HNF4A-209ENST00000619550 HOMEZQ8IX15 550 aa12.91□□□□□ -0.34
HNF4A-209ENST00000619550 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
HNF4A-209ENST00000619550 GBP3Q9H0R5 595 aa12.91□□□□□ -0.34
HNF4A-209ENST00000619550 UBE2HP62256 183 aa12.9□□□□□ -0.34
HNF4A-209ENST00000619550 CEBPZQ03701 1054 aaKnown RBP12.9□□□□□ -0.34
HNF4A-209ENST00000619550 STK38Q15208 465 aa12.9□□□□□ -0.34
HNF4A-209ENST00000619550 DDX11Q96FC9 970 aa12.9□□□□□ -0.34
HNF4A-209ENST00000619550 SYCP2Q9BX26 1530 aa12.9□□□□□ -0.34
HNF4A-209ENST00000619550 SERPINC1P01008 464 aa12.9□□□□□ -0.34
HNF4A-209ENST00000619550 JAKMIP1Q96N16 626 aaKnown RBP12.9□□□□□ -0.34
HNF4A-209ENST00000619550 CBFA2T2O43439 604 aa12.9□□□□□ -0.34
HNF4A-209ENST00000619550 GDPD2Q9HCC8 539 aa12.9□□□□□ -0.34
HNF4A-209ENST00000619550 CLIP2Q9UDT6 1046 aa12.9□□□□□ -0.34
HNF4A-209ENST00000619550 IL16Q14005 1332 aa12.9□□□□□ -0.34
HNF4A-209ENST00000619550 PER1O15534 1290 aaPredicted RBP12.9□□□□□ -0.34
HNF4A-209ENST00000619550 IVLP07476 585 aa12.9□□□□□ -0.34
HNF4A-209ENST00000619550 HCLS1P14317 486 aaPredicted RBP12.9□□□□□ -0.34
HNF4A-209ENST00000619550 DMTNQ08495 405 aa12.9□□□□□ -0.34
HNF4A-209ENST00000619550 WASHC4Q2M389 1173 aa12.9□□□□□ -0.34
HNF4A-209ENST00000619550 TTC22Q5TAA0 569 aa12.9□□□□□ -0.34
HNF4A-209ENST00000619550 BLOC1S2Q6QNY1 142 aa12.9□□□□□ -0.34
HNF4A-209ENST00000619550 MX1P20591 662 aa12.89□□□□□ -0.35
HNF4A-209ENST00000619550 ME1P48163 572 aa12.89□□□□□ -0.35
HNF4A-209ENST00000619550 CAMK4Q16566 473 aa12.89□□□□□ -0.35
HNF4A-209ENST00000619550 CLGNO14967 610 aa12.89□□□□□ -0.35
HNF4A-209ENST00000619550 GTF2F1P35269 517 aaKnown RBP eCLIP12.89□□□□□ -0.355e-7■■■■□ 21.5
HNF4A-209ENST00000619550 SH2B1Q9NRF2 756 aaPredicted RBP12.89□□□□□ -0.35
HNF4A-209ENST00000619550 SAFBQ15424 915 aaKnown RBP eCLIP12.89□□□□□ -0.352e-7■■■■□ 25.5
HNF4A-209ENST00000619550 TTC21AQ8NDW8 1320 aa12.89□□□□□ -0.35
HNF4A-209ENST00000619550 HSP90AB3PQ58FF7 597 aa12.88□□□□□ -0.35
HNF4A-209ENST00000619550 VPS53Q5VIR6 699 aa12.88□□□□□ -0.35
HNF4A-209ENST00000619550 KRT28Q7Z3Y7 464 aa12.88□□□□□ -0.35
HNF4A-209ENST00000619550 ZNF830Q96NB3 372 aaPredicted RBP12.88□□□□□ -0.35
HNF4A-209ENST00000619550 MSH6P52701 1360 aa12.88□□□□□ -0.35
HNF4A-209ENST00000619550 SMARCA5O60264 1052 aaPredicted RBP12.88□□□□□ -0.35
HNF4A-209ENST00000619550 CCDC158Q5M9N0 1113 aa12.88□□□□□ -0.35
HNF4A-209ENST00000619550 GPATCH11Q8N954 259 aa12.88□□□□□ -0.35
HNF4A-209ENST00000619550 LIMCH1Q9UPQ0 1083 aa12.88□□□□□ -0.35
HNF4A-209ENST00000619550 TRAPPC8Q9Y2L5 1435 aa12.88□□□□□ -0.35
HNF4A-209ENST00000619550 SFPQP23246 707 aaKnown RBP eCLIP12.88□□□□□ -0.359e-7■□□□□ 11.3
HNF4A-209ENST00000619550 ZNF445P59923 1031 aa12.88□□□□□ -0.35
HNF4A-209ENST00000619550 TMX3Q96JJ7 454 aa12.88□□□□□ -0.35
HNF4A-209ENST00000619550 DDX19AQ9NUU7 478 aaKnown RBP12.88□□□□□ -0.35
HNF4A-209ENST00000619550 NME9Q86XW9 330 aa12.88□□□□□ -0.35
HNF4A-209ENST00000619550 MYRIPQ8NFW9 859 aa12.88□□□□□ -0.35
HNF4A-209ENST00000619550 CNNM1Q9NRU3 951 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms