RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 PLPP6Q8IY26 295 aa7.91□□□□□ -1.14
CBWD3-215ENST00000619322 SLC16A10Q8TF71 515 aa7.91□□□□□ -1.14
CBWD3-215ENST00000619322 PPP1R15BQ5SWA1 713 aa7.91□□□□□ -1.14
CBWD3-215ENST00000619322 DDX27Q96GQ7 796 aaKnown RBP7.9□□□□□ -1.14
CBWD3-215ENST00000619322 AFDNP55196 1824 aaKnown RBP7.9□□□□□ -1.14
CBWD3-215ENST00000619322 EVC2Q86UK5 1308 aa7.9□□□□□ -1.14
CBWD3-215ENST00000619322 SCN4AP35499 1836 aa7.9□□□□□ -1.15
CBWD3-215ENST00000619322 SLC27A3Q5K4L6 730 aa7.9□□□□□ -1.15
CBWD3-215ENST00000619322 MARVELD3Q96A59 401 aa7.9□□□□□ -1.15
CBWD3-215ENST00000619322 L3MBTL3Q96JM7 780 aaPredicted RBP7.9□□□□□ -1.15
CBWD3-215ENST00000619322 CHIC2Q9UKJ5 165 aa7.9□□□□□ -1.15
CBWD3-215ENST00000619322 ZC3H4Q9UPT8 1303 aaKnown RBP7.89□□□□□ -1.15
CBWD3-215ENST00000619322 ARHGEF25Q86VW2 580 aa7.89□□□□□ -1.15
CBWD3-215ENST00000619322 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.89□□□□□ -1.15
CBWD3-215ENST00000619322 KRT27Q7Z3Y8 459 aa7.89□□□□□ -1.15
CBWD3-215ENST00000619322 ORAI2Q96SN7 254 aa7.89□□□□□ -1.15
CBWD3-215ENST00000619322 FOXK1P85037 733 aa7.88□□□□□ -1.15
CBWD3-215ENST00000619322 DPYSL4O14531 572 aa7.88□□□□□ -1.15
CBWD3-215ENST00000619322 LTBP1Q14766 1721 aa7.88□□□□□ -1.15
CBWD3-215ENST00000619322 ARAP2Q8WZ64 1704 aa7.88□□□□□ -1.15
CBWD3-215ENST00000619322 KCPQ6ZWJ8 1503 aa7.87□□□□□ -1.15
CBWD3-215ENST00000619322 TMC2Q8TDI7 906 aa7.87□□□□□ -1.15
CBWD3-215ENST00000619322 RANGAP1P46060 587 aaPredicted RBP7.87□□□□□ -1.15
CBWD3-215ENST00000619322 ERBB3P21860 1342 aa7.87□□□□□ -1.15
CBWD3-215ENST00000619322 G3V3G9 751 aa7.86□□□□□ -1.15
CBWD3-215ENST00000619322 MEX3CQ5U5Q3 659 aaKnown RBP7.86□□□□□ -1.15
CBWD3-215ENST00000619322 NUDT16Q96DE0 195 aaKnown RBP7.86□□□□□ -1.15
CBWD3-215ENST00000619322 ANKRD31Q8N7Z5 1873 aa7.86□□□□□ -1.15
CBWD3-215ENST00000619322 FAM83GA6ND36 823 aa7.86□□□□□ -1.15
CBWD3-215ENST00000619322 BAG6P46379 1132 aa7.86□□□□□ -1.15
CBWD3-215ENST00000619322 TCP11L2Q8N4U5 519 aa7.86□□□□□ -1.15
CBWD3-215ENST00000619322 PRAM1Q96QH2 718 aa7.86□□□□□ -1.15
CBWD3-215ENST00000619322 RYDENQ9NUL5 291 aaKnown RBP7.86□□□□□ -1.15
CBWD3-215ENST00000619322 PRKCSHP14314 528 aaPredicted RBP7.86□□□□□ -1.15
CBWD3-215ENST00000619322 MFSD10Q14728 455 aa7.86□□□□□ -1.15
CBWD3-215ENST00000619322 NLRP13Q86W25 1043 aa7.86□□□□□ -1.15
CBWD3-215ENST00000619322 NBPF8Q3BBV2 869 aa7.85□□□□□ -1.15
CBWD3-215ENST00000619322 A0A1B0GUL6 1792 aa7.85□□□□□ -1.15
CBWD3-215ENST00000619322 SCUBE2Q9NQ36 999 aa7.85□□□□□ -1.15
CBWD3-215ENST00000619322 SEMA3EO15041 775 aa7.84□□□□□ -1.15
CBWD3-215ENST00000619322 ZNF326Q5BKZ1 582 aaKnown RBP7.84□□□□□ -1.15
CBWD3-215ENST00000619322 TTC21BQ7Z4L5 1316 aa7.84□□□□□ -1.15
CBWD3-215ENST00000619322 ARSIQ5FYB1 569 aa7.84□□□□□ -1.15
CBWD3-215ENST00000619322 ACEP12821 1306 aa7.84□□□□□ -1.15
CBWD3-215ENST00000619322 SEPT12Q8IYM1 358 aa7.83□□□□□ -1.16
CBWD3-215ENST00000619322 NUDT7P0C024 238 aa7.83□□□□□ -1.16
CBWD3-215ENST00000619322 CACNA1FO60840 1977 aa7.83□□□□□ -1.16
CBWD3-215ENST00000619322 COL11A2P13942 1736 aaPredicted RBP7.83□□□□□ -1.16
CBWD3-215ENST00000619322 POTEB3A0JP26 581 aa7.83□□□□□ -1.16
CBWD3-215ENST00000619322 CFAP70Q5T0N1 1121 aa7.83□□□□□ -1.16
CBWD3-215ENST00000619322 POTEBQ6S5H4 581 aa7.83□□□□□ -1.16
CBWD3-215ENST00000619322 MLLT3P42568 568 aaPredicted RBP7.82□□□□□ -1.16
CBWD3-215ENST00000619322 PRIM1P49642 420 aaKnown RBP7.82□□□□□ -1.16
CBWD3-215ENST00000619322 ST18O60284 1047 aa7.82□□□□□ -1.16
CBWD3-215ENST00000619322 PDE4AP27815 886 aa7.82□□□□□ -1.16
CBWD3-215ENST00000619322 TESK2Q96S53 571 aa7.82□□□□□ -1.16
CBWD3-215ENST00000619322 ECM29Q5VYK3 1845 aa7.81□□□□□ -1.16
CBWD3-215ENST00000619322 PAPPA2Q9BXP8 1791 aa7.81□□□□□ -1.16
CBWD3-215ENST00000619322 E2F4Q16254 413 aa7.81□□□□□ -1.16
CBWD3-215ENST00000619322 ESCO1Q5FWF5 840 aa7.81□□□□□ -1.16
CBWD3-215ENST00000619322 BCL11AQ9H165 835 aa7.81□□□□□ -1.16
CBWD3-215ENST00000619322 MEGF6O75095 1541 aa7.81□□□□□ -1.16
CBWD3-215ENST00000619322 FLT4P35916 1363 aa7.8□□□□□ -1.16
CBWD3-215ENST00000619322 VSIG10Q8N0Z9 540 aa7.8□□□□□ -1.16
CBWD3-215ENST00000619322 CDK19Q9BWU1 502 aa7.8□□□□□ -1.16
CBWD3-215ENST00000619322 GPR153Q6NV75 609 aa7.8□□□□□ -1.16
CBWD3-215ENST00000619322 FAM163AQ96GL9 167 aaPredicted RBP7.8□□□□□ -1.16
CBWD3-215ENST00000619322 DLG5Q8TDM6 1919 aa7.8□□□□□ -1.16
CBWD3-215ENST00000619322 CAMK2BQ13554 666 aa7.8□□□□□ -1.16
CBWD3-215ENST00000619322 FLAD1Q8NFF5 587 aa7.8□□□□□ -1.16
CBWD3-215ENST00000619322 CDCA8Q53HL2 280 aa7.79□□□□□ -1.16
CBWD3-215ENST00000619322 IP6K1Q92551 441 aa7.79□□□□□ -1.16
CBWD3-215ENST00000619322 DDX12PQ92771 950 aa7.78□□□□□ -1.16
CBWD3-215ENST00000619322 PDZRN3Q9UPQ7 1066 aa7.78□□□□□ -1.16
CBWD3-215ENST00000619322 ROCK2O75116 1388 aaKnown RBP7.78□□□□□ -1.16
CBWD3-215ENST00000619322 KTN1Q86UP2 1357 aaKnown RBP7.78□□□□□ -1.16
CBWD3-215ENST00000619322 CEMIPQ8WUJ3 1361 aa7.78□□□□□ -1.16
CBWD3-215ENST00000619322 WASHC2AQ641Q2 1341 aa7.77□□□□□ -1.16
CBWD3-215ENST00000619322 OXER1Q8TDS5 423 aa7.77□□□□□ -1.17
CBWD3-215ENST00000619322 WAPLQ7Z5K2 1190 aa7.77□□□□□ -1.17
CBWD3-215ENST00000619322 C8orf37Q96NL8 207 aa7.77□□□□□ -1.17
CBWD3-215ENST00000619322 GCP02774 474 aa7.76□□□□□ -1.17
CBWD3-215ENST00000619322 PTGER2P43116 358 aa7.76□□□□□ -1.17
CBWD3-215ENST00000619322 RC3H1Q5TC82 1133 aaKnown RBP7.76□□□□□ -1.17
CBWD3-215ENST00000619322 SNED1Q8TER0 1413 aa7.76□□□□□ -1.17
CBWD3-215ENST00000619322 TRPM7Q96QT4 1865 aa7.76□□□□□ -1.17
CBWD3-215ENST00000619322 PCDHGA4Q9Y5G9 962 aa7.76□□□□□ -1.17
CBWD3-215ENST00000619322 CNTNAP4Q9C0A0 1308 aa7.76□□□□□ -1.17
CBWD3-215ENST00000619322 WDR70Q9NW82 654 aa7.75□□□□□ -1.17
CBWD3-215ENST00000619322 KCNQ2O43526 872 aa7.75□□□□□ -1.17
CBWD3-215ENST00000619322 GTF3C3Q9Y5Q9 886 aa7.75□□□□□ -1.17
CBWD3-215ENST00000619322 ATP10DQ9P241 1426 aa7.75□□□□□ -1.17
CBWD3-215ENST00000619322 COL4A1P02462 1669 aa7.75□□□□□ -1.17
CBWD3-215ENST00000619322 MTFR1LQ9H019 292 aa7.74□□□□□ -1.17
CBWD3-215ENST00000619322 ZEB1P37275 1124 aaPredicted RBP7.73□□□□□ -1.17
CBWD3-215ENST00000619322 NEUROD1Q13562 356 aa7.73□□□□□ -1.17
CBWD3-215ENST00000619322 POTEEQ6S8J3 1075 aa7.73□□□□□ -1.17
CBWD3-215ENST00000619322 MYH14Q7Z406 1995 aaKnown RBP7.73□□□□□ -1.17
CBWD3-215ENST00000619322 NBPF14Q5TI25 921 aa7.73□□□□□ -1.17
CBWD3-215ENST00000619322 CD2APQ9Y5K6 639 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms