RNA–Protein interactions for RNA: ENST00000619009.4

BARD1-213, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 1 (best) BASIC

Gene BARD1, Length 3,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-213ENST00000619009 BCL11BQ9C0K0 894 aaPredicted RBP11.77□□□□□ -0.53
BARD1-213ENST00000619009 TTC12Q9H892 705 aaPredicted RBP11.77□□□□□ -0.53
BARD1-213ENST00000619009 IBTKQ9P2D0 1353 aaPredicted RBP11.77□□□□□ -0.53
BARD1-213ENST00000619009 EYA1Q99502 592 aa11.77□□□□□ -0.53
BARD1-213ENST00000619009 GDPD2Q9HCC8 539 aa11.77□□□□□ -0.53
BARD1-213ENST00000619009 GCP02774 474 aa11.76□□□□□ -0.53
BARD1-213ENST00000619009 PPP4R3BQ5MIZ7 849 aa11.76□□□□□ -0.53
BARD1-213ENST00000619009 OTUD7AQ8TE49 926 aaPredicted RBP11.76□□□□□ -0.53
BARD1-213ENST00000619009 LMTK2Q8IWU2 1503 aa11.76□□□□□ -0.53
BARD1-213ENST00000619009 ANXA1P04083 346 aa11.76□□□□□ -0.53
BARD1-213ENST00000619009 GNAI1P63096 354 aa11.76□□□□□ -0.53
BARD1-213ENST00000619009 RABEP1Q15276 862 aa11.76□□□□□ -0.53
BARD1-213ENST00000619009 CFAP44Q96MT7 982 aa11.76□□□□□ -0.53
BARD1-213ENST00000619009 PLEKHG1Q9ULL1 1385 aa11.76□□□□□ -0.53
BARD1-213ENST00000619009 CCDC27Q2M243 656 aa11.76□□□□□ -0.53
BARD1-213ENST00000619009 TSPYL6Q8N831 410 aa11.76□□□□□ -0.53
BARD1-213ENST00000619009 ALKQ9UM73 1620 aa11.76□□□□□ -0.53
BARD1-213ENST00000619009 MROH2AA6NES4 1674 aa11.75□□□□□ -0.53
BARD1-213ENST00000619009 CADPS2Q86UW7 1296 aa11.75□□□□□ -0.53
BARD1-213ENST00000619009 TRIM35Q9UPQ4 493 aa11.75□□□□□ -0.53
BARD1-213ENST00000619009 PIK3C2BO00750 1634 aa11.75□□□□□ -0.53
BARD1-213ENST00000619009 FKBP5Q13451 457 aaPredicted RBP11.75□□□□□ -0.53
BARD1-213ENST00000619009 SETD1BQ9UPS6 1966 aaKnown RBP11.74□□□□□ -0.53
BARD1-213ENST00000619009 INTS3Q68E01 1043 aaKnown RBP11.74□□□□□ -0.53
BARD1-213ENST00000619009 CCDC39Q9UFE4 941 aa11.74□□□□□ -0.53
BARD1-213ENST00000619009 TMEM94Q12767 1356 aa11.74□□□□□ -0.53
BARD1-213ENST00000619009 NEXMIFQ5QGS0 1516 aa11.74□□□□□ -0.53
BARD1-213ENST00000619009 VWDEQ8N2E2 1590 aa11.74□□□□□ -0.53
BARD1-213ENST00000619009 SLC4A2P04920 1241 aa11.74□□□□□ -0.53
BARD1-213ENST00000619009 SBNO2Q9Y2G9 1366 aa11.73□□□□□ -0.53
BARD1-213ENST00000619009 U2AF2P26368 475 aaKnown RBP eCLIP11.73□□□□□ -0.53
BARD1-213ENST00000619009 MTHFSDQ2M296 383 aaKnown RBP11.73□□□□□ -0.53
BARD1-213ENST00000619009 HS1BP3Q53T59 392 aa11.73□□□□□ -0.53
BARD1-213ENST00000619009 SYAP1Q96A49 352 aaPredicted RBP11.73□□□□□ -0.53
BARD1-213ENST00000619009 MYRIPQ8NFW9 859 aa11.73□□□□□ -0.53
BARD1-213ENST00000619009 ANKRD24Q8TF21 1146 aa11.73□□□□□ -0.53
BARD1-213ENST00000619009 ARHGEF40Q8TER5 1519 aa11.72□□□□□ -0.53
BARD1-213ENST00000619009 IL13P35225 146 aa11.72□□□□□ -0.53
BARD1-213ENST00000619009 PIP4K2AP48426 406 aaPredicted RBP11.72□□□□□ -0.53
BARD1-213ENST00000619009 LRSAM1Q6UWE0 723 aa11.72□□□□□ -0.53
BARD1-213ENST00000619009 TMEM51Q9NW97 253 aa11.72□□□□□ -0.53
BARD1-213ENST00000619009 PLEKHG3A1L390 1219 aa11.72□□□□□ -0.53
BARD1-213ENST00000619009 F6X3S4 739 aa11.72□□□□□ -0.53
BARD1-213ENST00000619009 SMARCA5O60264 1052 aaPredicted RBP11.72□□□□□ -0.53
BARD1-213ENST00000619009 MBIPQ9NS73 344 aa11.72□□□□□ -0.53
BARD1-213ENST00000619009 GADD45BO75293 160 aaPredicted RBP11.72□□□□□ -0.53
BARD1-213ENST00000619009 PTCD1O75127 700 aaKnown RBP11.71□□□□□ -0.53
BARD1-213ENST00000619009 UTP14CQ5TAP6 766 aaKnown RBP11.71□□□□□ -0.53
BARD1-213ENST00000619009 C8orf58Q8NAV2 365 aa11.71□□□□□ -0.53
BARD1-213ENST00000619009 BCL2L12Q9HB09 334 aa11.71□□□□□ -0.53
BARD1-213ENST00000619009 REC8O95072 547 aa11.71□□□□□ -0.53
BARD1-213ENST00000619009 PDE4CQ08493 712 aa11.71□□□□□ -0.53
BARD1-213ENST00000619009 PUS7Q96PZ0 661 aaKnown RBP11.71□□□□□ -0.53
BARD1-213ENST00000619009 HOXC9P31274 260 aa11.71□□□□□ -0.54
BARD1-213ENST00000619009 NEK4P51957 841 aa11.71□□□□□ -0.54
BARD1-213ENST00000619009 OS9Q13438 667 aaPredicted RBP11.71□□□□□ -0.54
BARD1-213ENST00000619009 MTERF4Q7Z6M4 381 aaKnown RBP11.71□□□□□ -0.54
BARD1-213ENST00000619009 MSH6P52701 1360 aa11.71□□□□□ -0.54
BARD1-213ENST00000619009 DEPDC5O75140 1603 aa11.71□□□□□ -0.54
BARD1-213ENST00000619009 NAA30Q147X3 362 aaPredicted RBP11.7□□□□□ -0.54
BARD1-213ENST00000619009 USP25Q9UHP3 1055 aa11.7□□□□□ -0.54
BARD1-213ENST00000619009 MCCP23508 829 aa11.7□□□□□ -0.54
BARD1-213ENST00000619009 CHAF1AQ13111 956 aaPredicted RBP11.7□□□□□ -0.54
BARD1-213ENST00000619009 SLC39A6Q13433 755 aa11.7□□□□□ -0.54
BARD1-213ENST00000619009 CWC22Q9HCG8 908 aaKnown RBP11.7□□□□□ -0.54
BARD1-213ENST00000619009 KDM5AP29375 1690 aaKnown RBP11.7□□□□□ -0.54
BARD1-213ENST00000619009 ZBTB7BO15156 539 aaPredicted RBP11.7□□□□□ -0.54
BARD1-213ENST00000619009 NBPF6Q5VWK0 638 aa11.7□□□□□ -0.54
BARD1-213ENST00000619009 KCNH5Q8NCM2 988 aa11.7□□□□□ -0.54
BARD1-213ENST00000619009 NBPF4Q96M43 638 aa11.7□□□□□ -0.54
BARD1-213ENST00000619009 NPHP4O75161 1426 aaPredicted RBP11.7□□□□□ -0.54
BARD1-213ENST00000619009 SIGLEC1Q9BZZ2 1709 aa11.7□□□□□ -0.54
BARD1-213ENST00000619009 PREX1Q8TCU6 1659 aa11.7□□□□□ -0.54
BARD1-213ENST00000619009 ADAMTS13Q76LX8 1427 aa11.69□□□□□ -0.54
BARD1-213ENST00000619009 NSD2O96028 1365 aa11.69□□□□□ -0.54
BARD1-213ENST00000619009 TRIM6-TRIM34B2RNG4 842 aa11.69□□□□□ -0.54
BARD1-213ENST00000619009 MYL6BP14649 208 aa11.69□□□□□ -0.54
BARD1-213ENST00000619009 SLAIN2Q9P270 581 aa11.69□□□□□ -0.54
BARD1-213ENST00000619009 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
BARD1-213ENST00000619009 AP5Z1O43299 807 aa11.69□□□□□ -0.54
BARD1-213ENST00000619009 PLEKHO1Q53GL0 409 aaPredicted RBP11.69□□□□□ -0.54
BARD1-213ENST00000619009 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
BARD1-213ENST00000619009 CHMP3Q9Y3E7 222 aa11.69□□□□□ -0.54
BARD1-213ENST00000619009 TULP4Q9NRJ4 1543 aa11.69□□□□□ -0.54
BARD1-213ENST00000619009 AGLP35573 1532 aa11.69□□□□□ -0.54
BARD1-213ENST00000619009 ZFYVE9O95405 1425 aa11.69□□□□□ -0.54
BARD1-213ENST00000619009 GNAT3A8MTJ3 354 aa11.69□□□□□ -0.54
BARD1-213ENST00000619009 PLEKHF1Q96S99 279 aa11.69□□□□□ -0.54
BARD1-213ENST00000619009 USP26Q9BXU7 913 aa11.69□□□□□ -0.54
BARD1-213ENST00000619009 TATP17735 454 aaPredicted RBP11.68□□□□□ -0.54
BARD1-213ENST00000619009 NOLC1Q14978 699 aaKnown RBP eCLIP11.68□□□□□ -0.54
BARD1-213ENST00000619009 TTC5Q8N0Z6 440 aa11.68□□□□□ -0.54
BARD1-213ENST00000619009 API5Q9BZZ5 524 aaKnown RBP11.68□□□□□ -0.54
BARD1-213ENST00000619009 EDC4Q6P2E9 1401 aaKnown RBP11.68□□□□□ -0.54
BARD1-213ENST00000619009 PHF14O94880 888 aa11.68□□□□□ -0.54
BARD1-213ENST00000619009 ALDH1L2Q3SY69 923 aa11.68□□□□□ -0.54
BARD1-213ENST00000619009 HDGFL1Q5TGJ6 251 aa11.68□□□□□ -0.54
BARD1-213ENST00000619009 TSPY26PQ9H489 355 aa11.68□□□□□ -0.54
BARD1-213ENST00000619009 PTPRMP28827 1452 aa11.68□□□□□ -0.54
BARD1-213ENST00000619009 KDM4FA0A1W2PPD8 638 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms