RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 PIP4P2Q8N4L2 257 aa5.16□□□□□ -1.58
UBE2D3-233ENST00000618836 KLHL42Q9P2K6 505 aa5.16□□□□□ -1.58
UBE2D3-233ENST00000618836 SUPT16HQ9Y5B9 1047 aaKnown RBP5.16□□□□□ -1.58
UBE2D3-233ENST00000618836 GLI3P10071 1580 aa5.16□□□□□ -1.58
UBE2D3-233ENST00000618836 THSD7BQ9C0I4 1608 aa5.16□□□□□ -1.58
UBE2D3-233ENST00000618836 TMEM92Q6UXU6 159 aa5.16□□□□□ -1.58
UBE2D3-233ENST00000618836 PDCL3Q9H2J4 239 aa5.16□□□□□ -1.58
UBE2D3-233ENST00000618836 NRBP1Q9UHY1 535 aa5.16□□□□□ -1.58
UBE2D3-233ENST00000618836 THSD7AQ9UPZ6 1657 aa5.16□□□□□ -1.58
UBE2D3-233ENST00000618836 ERBB3P21860 1342 aa5.16□□□□□ -1.58
UBE2D3-233ENST00000618836 DDX27Q96GQ7 796 aaKnown RBP5.16□□□□□ -1.58
UBE2D3-233ENST00000618836 PARD3Q8TEW0 1356 aa5.15□□□□□ -1.58
UBE2D3-233ENST00000618836 PTCH1Q13635 1447 aa5.15□□□□□ -1.58
UBE2D3-233ENST00000618836 SH3BP5O60239 455 aa5.15□□□□□ -1.58
UBE2D3-233ENST00000618836 TAF3Q5VWG9 929 aa5.15□□□□□ -1.58
UBE2D3-233ENST00000618836 PNISRQ8TF01 805 aaKnown RBP5.15□□□□□ -1.58
UBE2D3-233ENST00000618836 QTRT2Q9H974 415 aaKnown RBP5.15□□□□□ -1.58
UBE2D3-233ENST00000618836 PSME1Q06323 249 aa5.15□□□□□ -1.59
UBE2D3-233ENST00000618836 SF3B2Q13435 895 aaKnown RBP5.15□□□□□ -1.59
UBE2D3-233ENST00000618836 FAM161AQ3B820 660 aa5.15□□□□□ -1.59
UBE2D3-233ENST00000618836 SND1Q7KZF4 910 aaKnown RBP eCLIP5.15□□□□□ -1.59
UBE2D3-233ENST00000618836 TXNDC2Q86VQ3 553 aa5.15□□□□□ -1.59
UBE2D3-233ENST00000618836 ADCY9O60503 1353 aa5.14□□□□□ -1.59
UBE2D3-233ENST00000618836 WASHC2AQ641Q2 1341 aa5.14□□□□□ -1.59
UBE2D3-233ENST00000618836 NGEFQ8N5V2 710 aa5.14□□□□□ -1.59
UBE2D3-233ENST00000618836 RGL3Q3MIN7 710 aa5.14□□□□□ -1.59
UBE2D3-233ENST00000618836 ZNF513Q8N8E2 541 aaPredicted RBP5.14□□□□□ -1.59
UBE2D3-233ENST00000618836 ZNF579Q8NAF0 562 aaKnown RBP5.14□□□□□ -1.59
UBE2D3-233ENST00000618836 PHOX2BQ99453 314 aa5.14□□□□□ -1.59
UBE2D3-233ENST00000618836 SSR1P43307 286 aaKnown RBP5.14□□□□□ -1.59
UBE2D3-233ENST00000618836 SATB1Q01826 763 aa5.14□□□□□ -1.59
UBE2D3-233ENST00000618836 CAMK2BQ13554 666 aa5.14□□□□□ -1.59
UBE2D3-233ENST00000618836 MFSD10Q14728 455 aa5.14□□□□□ -1.59
UBE2D3-233ENST00000618836 LARGE2Q8N3Y3 721 aa5.14□□□□□ -1.59
UBE2D3-233ENST00000618836 DNAJC5GQ8N7S2 189 aa5.14□□□□□ -1.59
UBE2D3-233ENST00000618836 MRRFQ96E11 262 aaKnown RBP5.14□□□□□ -1.59
UBE2D3-233ENST00000618836 GOLGA3Q08378 1498 aa5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 SPOCK3Q9BQ16 436 aa5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 ZNF777Q9ULD5 760 aaPredicted RBP5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 FAN1Q9Y2M0 1017 aa5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 ABCC5O15440 1437 aa5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 FXR2P51116 673 aaKnown RBP eCLIP5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 RBM6P78332 1123 aaKnown RBP5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 CCDC184Q52MB2 194 aa5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 C11orf96Q7Z7L8 435 aa5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 ITFG2Q969R8 447 aa5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 RBM42Q9BTD8 480 aaKnown RBP5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 RYDENQ9NUL5 291 aaKnown RBP5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 ADGRB3O60242 1522 aa5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 PZPP20742 1482 aa5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 NRAPQ86VF7 1730 aa5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 C10orf71Q711Q0 1435 aa5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 NRXN3Q9Y4C0 1643 aa5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 TRIM66O15016 1216 aa5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 GALR2O43603 387 aaPredicted RBP5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 FOSBP53539 338 aa5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 ABCF2Q9UG63 623 aa5.13□□□□□ -1.59
UBE2D3-233ENST00000618836 COQ9O75208 318 aa5.12□□□□□ -1.59
UBE2D3-233ENST00000618836 TDO2P48775 406 aa5.12□□□□□ -1.59
UBE2D3-233ENST00000618836 CDC37Q16543 378 aaPredicted RBP5.12□□□□□ -1.59
UBE2D3-233ENST00000618836 CCDC97Q96F63 343 aaPredicted RBP5.12□□□□□ -1.59
UBE2D3-233ENST00000618836 SCYL1Q96KG9 808 aa5.12□□□□□ -1.59
UBE2D3-233ENST00000618836 TMEM106CQ9BVX2 250 aa5.12□□□□□ -1.59
UBE2D3-233ENST00000618836 PARP9Q8IXQ6 854 aa5.12□□□□□ -1.59
UBE2D3-233ENST00000618836 SWAP70Q9UH65 585 aa5.12□□□□□ -1.59
UBE2D3-233ENST00000618836 TPX2Q9ULW0 747 aaKnown RBP5.12□□□□□ -1.59
UBE2D3-233ENST00000618836 VIRMAQ69YN4 1812 aaKnown RBP5.12□□□□□ -1.59
UBE2D3-233ENST00000618836 PDE4DQ08499 809 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 NEXNQ0ZGT2 675 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 ZRSR2Q15696 482 aaKnown RBP5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 C1QTNF12Q5T7M4 302 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 NRKQ7Z2Y5 1582 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 PCGF5Q86SE9 256 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 PDCD7Q8N8D1 485 aaKnown RBP5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 RNF217Q8TC41 542 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 PDZRN3Q9UPQ7 1066 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 SMC3Q9UQE7 1217 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 SBNO2Q9Y2G9 1366 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 VGLL3A8MV65 326 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 HSP90AA1P07900 732 aaKnown RBP5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 CD151P48509 253 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 TBC1D10BQ4KMP7 808 aaPredicted RBP5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 VTI1AQ96AJ9 217 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 FBXO9Q9UK97 447 aaPredicted RBP5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 PEX19P40855 299 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 PPP4R3BQ5MIZ7 849 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 GPIHBP1Q8IV16 184 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 PLSCR2Q9NRY7 297 aa5.11□□□□□ -1.59
UBE2D3-233ENST00000618836 DCCP43146 1447 aa5.1□□□□□ -1.59
UBE2D3-233ENST00000618836 YTHDC2Q9H6S0 1430 aaKnown RBP5.1□□□□□ -1.59
UBE2D3-233ENST00000618836 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.1□□□□□ -1.59
UBE2D3-233ENST00000618836 PROSER2Q86WR7 435 aaPredicted RBP5.1□□□□□ -1.59
UBE2D3-233ENST00000618836 CREBRFQ8IUR6 639 aa5.1□□□□□ -1.59
UBE2D3-233ENST00000618836 PROCA1Q8NCQ7 364 aaPredicted RBP5.1□□□□□ -1.59
UBE2D3-233ENST00000618836 ZCRB1Q8TBF4 217 aaKnown RBP5.1□□□□□ -1.59
UBE2D3-233ENST00000618836 MAST1Q9Y2H9 1570 aa5.1□□□□□ -1.59
UBE2D3-233ENST00000618836 TTLL13PA6NNM8 815 aa5.1□□□□□ -1.59
UBE2D3-233ENST00000618836 POU5F1Q01860 360 aaKnown RBP5.1□□□□□ -1.59
UBE2D3-233ENST00000618836 ICE2Q659A1 982 aa5.1□□□□□ -1.59
UBE2D3-233ENST00000618836 DDX12PQ92771 950 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 206.8 ms