RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 HDGFP51858 240 aaKnown RBP24.92■■□□□ 1.58
NEK3-208ENST00000618534 ESYT1Q9BSJ8 1104 aa24.92■■□□□ 1.58
NEK3-208ENST00000618534 FMN2Q9NZ56 1722 aa24.91■■□□□ 1.58
NEK3-208ENST00000618534 TMEM63CQ9P1W3 806 aa24.91■■□□□ 1.58
NEK3-208ENST00000618534 HSP90AA2PQ14568 343 aaPredicted RBP24.9■■□□□ 1.58
NEK3-208ENST00000618534 LRRCC1Q9C099 1032 aa24.9■■□□□ 1.58
NEK3-208ENST00000618534 NSFL1CQ9UNZ2 370 aaKnown RBP24.9■■□□□ 1.58
NEK3-208ENST00000618534 MSNP26038 577 aaKnown RBP24.9■■□□□ 1.58
NEK3-208ENST00000618534 PALD1Q9ULE6 856 aa24.9■■□□□ 1.58
NEK3-208ENST00000618534 ADAMTS13Q76LX8 1427 aa24.89■■□□□ 1.58
NEK3-208ENST00000618534 MX1P20591 662 aa24.89■■□□□ 1.58
NEK3-208ENST00000618534 PNMA6EA0A0J9YXQ4 647 aa24.88■■□□□ 1.57
NEK3-208ENST00000618534 RRP9O43818 475 aaKnown RBP24.88■■□□□ 1.57
NEK3-208ENST00000618534 STK31Q9BXU1 1019 aa24.88■■□□□ 1.57
NEK3-208ENST00000618534 PDLIM2Q96JY6 352 aa24.88■■□□□ 1.57
NEK3-208ENST00000618534 ESF1Q9H501 851 aaKnown RBP24.88■■□□□ 1.57
NEK3-208ENST00000618534 TMEM2Q9UHN6 1383 aa24.88■■□□□ 1.57
NEK3-208ENST00000618534 TPM2P07951 284 aa24.87■■□□□ 1.57
NEK3-208ENST00000618534 KIAA1211Q6ZU35 1233 aa24.87■■□□□ 1.57
NEK3-208ENST00000618534 SSH2Q76I76 1423 aa24.87■■□□□ 1.57
NEK3-208ENST00000618534 CEP170BQ9Y4F5 1589 aaPredicted RBP24.87■■□□□ 1.57
NEK3-208ENST00000618534 SYCE3A1L190 88 aa24.86■■□□□ 1.57
NEK3-208ENST00000618534 FLIIQ13045 1269 aa24.86■■□□□ 1.57
NEK3-208ENST00000618534 KDRP35968 1356 aa24.86■■□□□ 1.57
NEK3-208ENST00000618534 CHMLP26374 656 aa24.86■■□□□ 1.57
NEK3-208ENST00000618534 MCM2P49736 904 aa24.86■■□□□ 1.57
NEK3-208ENST00000618534 FKBP5Q13451 457 aaPredicted RBP24.86■■□□□ 1.57
NEK3-208ENST00000618534 LRSAM1Q6UWE0 723 aa24.86■■□□□ 1.57
NEK3-208ENST00000618534 NOL8Q76FK4 1167 aaKnown RBP24.86■■□□□ 1.57
NEK3-208ENST00000618534 RILPL2Q969X0 211 aa24.86■■□□□ 1.57
NEK3-208ENST00000618534 ANO2Q9NQ90 1003 aa24.86■■□□□ 1.57
NEK3-208ENST00000618534 FAM208AQ9UK61 1670 aaKnown RBP24.86■■□□□ 1.57
NEK3-208ENST00000618534 TNRQ92752 1358 aa24.85■■□□□ 1.57
NEK3-208ENST00000618534 MCCP23508 829 aa24.85■■□□□ 1.57
NEK3-208ENST00000618534 CUL4AQ13619 759 aa24.85■■□□□ 1.57
NEK3-208ENST00000618534 XRN1Q8IZH2 1706 aaKnown RBP24.85■■□□□ 1.57
NEK3-208ENST00000618534 FLT4P35916 1363 aa24.85■■□□□ 1.57
NEK3-208ENST00000618534 TRIM6-TRIM34B2RNG4 842 aa24.85■■□□□ 1.57
NEK3-208ENST00000618534 BRD1O95696 1058 aa24.85■■□□□ 1.57
NEK3-208ENST00000618534 HS1BP3Q53T59 392 aa24.85■■□□□ 1.57
NEK3-208ENST00000618534 NECTIN2Q92692 538 aa24.85■■□□□ 1.57
NEK3-208ENST00000618534 SBNO1A3KN83 1393 aa24.84■■□□□ 1.57
NEK3-208ENST00000618534 OFD1O75665 1012 aa24.84■■□□□ 1.57
NEK3-208ENST00000618534 GNAI3P08754 354 aa24.84■■□□□ 1.57
NEK3-208ENST00000618534 EYA1Q99502 592 aa24.84■■□□□ 1.57
NEK3-208ENST00000618534 UBR1Q8IWV7 1749 aa24.84■■□□□ 1.57
NEK3-208ENST00000618534 ATP8B2P98198 1209 aa24.84■■□□□ 1.57
NEK3-208ENST00000618534 IGSF1Q8N6C5 1336 aa24.82■■□□□ 1.56
NEK3-208ENST00000618534 MBD3O95983 291 aa24.82■■□□□ 1.56
NEK3-208ENST00000618534 ANAPC15P60006 121 aa24.82■■□□□ 1.56
NEK3-208ENST00000618534 CCDC30Q5VVM6 783 aa24.82■■□□□ 1.56
NEK3-208ENST00000618534 UNC5CLQ8IV45 518 aa24.82■■□□□ 1.56
NEK3-208ENST00000618534 NOL7Q9UMY1 257 aaKnown RBP24.82■■□□□ 1.56
NEK3-208ENST00000618534 LRRFIP2Q9Y608 721 aaKnown RBP24.82■■□□□ 1.56
NEK3-208ENST00000618534 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.81■■□□□ 1.56
NEK3-208ENST00000618534 LRRC37A3O60309 1634 aa24.81■■□□□ 1.56
NEK3-208ENST00000618534 STAP2Q9UGK3 403 aa24.81■■□□□ 1.56
NEK3-208ENST00000618534 TTC21AQ8NDW8 1320 aa24.8■■□□□ 1.56
NEK3-208ENST00000618534 AMPHP49418 695 aa24.8■■□□□ 1.56
NEK3-208ENST00000618534 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.8■■□□□ 1.56
NEK3-208ENST00000618534 UPF3BQ9BZI7 483 aaKnown RBP24.8■■□□□ 1.56
NEK3-208ENST00000618534 INTS4Q96HW7 963 aaKnown RBP24.79■■□□□ 1.56
NEK3-208ENST00000618534 SRCIN1Q9C0H9 1055 aa24.77■■□□□ 1.56
NEK3-208ENST00000618534 IL25Q9H293 177 aa24.77■■□□□ 1.56
NEK3-208ENST00000618534 LTKP29376 864 aa24.77■■□□□ 1.56
NEK3-208ENST00000618534 PTPRUQ92729 1446 aa24.77■■□□□ 1.56
NEK3-208ENST00000618534 IL1RAPL2Q9NP60 686 aa24.76■■□□□ 1.55
NEK3-208ENST00000618534 GLIPR1L2Q4G1C9 344 aa24.76■■□□□ 1.55
NEK3-208ENST00000618534 RNF214Q8ND24 703 aa24.76■■□□□ 1.55
NEK3-208ENST00000618534 IL17RAQ96F46 866 aa24.76■■□□□ 1.55
NEK3-208ENST00000618534 GNAT3A8MTJ3 354 aa24.75■■□□□ 1.55
NEK3-208ENST00000618534 HTATSF1O43719 755 aaKnown RBP24.75■■□□□ 1.55
NEK3-208ENST00000618534 ZNF500O60304 480 aaPredicted RBP24.75■■□□□ 1.55
NEK3-208ENST00000618534 USP44Q9H0E7 712 aa24.75■■□□□ 1.55
NEK3-208ENST00000618534 N4BP2Q86UW6 1770 aaPredicted RBP24.75■■□□□ 1.55
NEK3-208ENST00000618534 PLEKHG1Q9ULL1 1385 aa24.75■■□□□ 1.55
NEK3-208ENST00000618534 SLC26A8Q96RN1 970 aa24.75■■□□□ 1.55
NEK3-208ENST00000618534 FOXD4L6Q3SYB3 417 aaPredicted RBP24.74■■□□□ 1.55
NEK3-208ENST00000618534 FOXD4L3Q6VB84 417 aaPredicted RBP24.74■■□□□ 1.55
NEK3-208ENST00000618534 XPCQ01831 940 aaPredicted RBP24.74■■□□□ 1.55
NEK3-208ENST00000618534 ZKSCAN5Q9Y2L8 839 aa24.74■■□□□ 1.55
NEK3-208ENST00000618534 UBTFL1P0CB47 393 aaPredicted RBP24.73■■□□□ 1.55
NEK3-208ENST00000618534 NUTM1Q86Y26 1132 aa24.73■■□□□ 1.55
NEK3-208ENST00000618534 AOX1Q06278 1338 aa24.73■■□□□ 1.55
NEK3-208ENST00000618534 PIK3C2AO00443 1686 aa24.73■■□□□ 1.55
NEK3-208ENST00000618534 PXDNLA1KZ92 1463 aa24.73■■□□□ 1.55
NEK3-208ENST00000618534 NGDNQ8NEJ9 315 aaKnown RBP24.73■■□□□ 1.55
NEK3-208ENST00000618534 SOS1Q07889 1333 aaPredicted RBP24.72■■□□□ 1.55
NEK3-208ENST00000618534 GDPD2Q9HCC8 539 aa24.72■■□□□ 1.55
NEK3-208ENST00000618534 CACNA1FO60840 1977 aa24.72■■□□□ 1.55
NEK3-208ENST00000618534 IL17REQ8NFR9 667 aa24.72■■□□□ 1.55
NEK3-208ENST00000618534 RGPD8O14715 1765 aaPredicted RBP24.71■■□□□ 1.55
NEK3-208ENST00000618534 GADD45BO75293 160 aaPredicted RBP24.71■■□□□ 1.55
NEK3-208ENST00000618534 MAP4K4O95819 1239 aaPredicted RBP24.71■■□□□ 1.55
NEK3-208ENST00000618534 HSPA4P34932 840 aa24.71■■□□□ 1.55
NEK3-208ENST00000618534 SSH3Q8TE77 659 aa24.71■■□□□ 1.55
NEK3-208ENST00000618534 TSPY26PQ9H489 355 aa24.71■■□□□ 1.55
NEK3-208ENST00000618534 R3HCC1Q9Y3T6 440 aaKnown RBP24.71■■□□□ 1.55
NEK3-208ENST00000618534 MAP3K5Q99683 1374 aa24.7■■□□□ 1.54
NEK3-208ENST00000618534 CCDC39Q9UFE4 941 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms