RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 MCCP23508 829 aa4.54□□□□□ -1.68
SMC5-204ENST00000618375 PTGIRP43119 386 aa4.54□□□□□ -1.68
SMC5-204ENST00000618375 IRX3P78415 501 aaPredicted RBP4.54□□□□□ -1.68
SMC5-204ENST00000618375 DMTNQ08495 405 aa4.54□□□□□ -1.68
SMC5-204ENST00000618375 RNF20Q5VTR2 975 aa4.54□□□□□ -1.68
SMC5-204ENST00000618375 LYSMD3Q7Z3D4 306 aa4.54□□□□□ -1.68
SMC5-204ENST00000618375 PRICKLE2Q7Z3G6 844 aa4.54□□□□□ -1.68
SMC5-204ENST00000618375 CNPY4Q8N129 248 aa4.54□□□□□ -1.68
SMC5-204ENST00000618375 VWA5B2Q8N398 1253 aa4.54□□□□□ -1.68
SMC5-204ENST00000618375 FRAT1Q92837 279 aaPredicted RBP4.54□□□□□ -1.68
SMC5-204ENST00000618375 ZCCHC6Q5VYS8 1495 aaKnown RBP4.54□□□□□ -1.68
SMC5-204ENST00000618375 GOLGA6L3A6NEY3 463 aa4.53□□□□□ -1.68
SMC5-204ENST00000618375 ADD1P35611 737 aaKnown RBP4.53□□□□□ -1.68
SMC5-204ENST00000618375 TNNT2P45379 298 aaPredicted RBP4.53□□□□□ -1.68
SMC5-204ENST00000618375 BRPF1P55201 1214 aaPredicted RBP4.53□□□□□ -1.68
SMC5-204ENST00000618375 SV2AQ7L0J3 742 aa4.53□□□□□ -1.68
SMC5-204ENST00000618375 RNF217Q8TC41 542 aa4.53□□□□□ -1.68
SMC5-204ENST00000618375 NLRP3Q96P20 1036 aa4.53□□□□□ -1.68
SMC5-204ENST00000618375 COL25A1Q9BXS0 654 aaPredicted RBP4.53□□□□□ -1.68
SMC5-204ENST00000618375 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.53□□□□□ -1.68
SMC5-204ENST00000618375 ESPNB1AK53 854 aa4.52□□□□□ -1.69
SMC5-204ENST00000618375 LILRA1O75019 489 aa4.52□□□□□ -1.69
SMC5-204ENST00000618375 SLC27A3Q5K4L6 730 aa4.52□□□□□ -1.69
SMC5-204ENST00000618375 SVOPQ8N4V2 548 aa4.52□□□□□ -1.69
SMC5-204ENST00000618375 CEP120Q8N960 986 aa4.52□□□□□ -1.69
SMC5-204ENST00000618375 TRIM44Q96DX7 344 aaPredicted RBP4.52□□□□□ -1.69
SMC5-204ENST00000618375 ZNF830Q96NB3 372 aaPredicted RBP4.52□□□□□ -1.69
SMC5-204ENST00000618375 GTPBP4Q9BZE4 634 aaKnown RBP4.52□□□□□ -1.69
SMC5-204ENST00000618375 YY1AP1Q9H869 796 aa4.52□□□□□ -1.69
SMC5-204ENST00000618375 PRM3Q9NNZ6 103 aa4.52□□□□□ -1.69
SMC5-204ENST00000618375 LAS1LQ9Y4W2 734 aaKnown RBP4.52□□□□□ -1.69
SMC5-204ENST00000618375 PCDHB11Q9Y5F2 797 aa4.52□□□□□ -1.69
SMC5-204ENST00000618375 NDUFB9Q9Y6M9 179 aa4.52□□□□□ -1.69
SMC5-204ENST00000618375 SLC35F4A4IF30 521 aa4.51□□□□□ -1.69
SMC5-204ENST00000618375 LETM1O95202 739 aaPredicted RBP4.51□□□□□ -1.69
SMC5-204ENST00000618375 RHOQP17081 205 aa4.51□□□□□ -1.69
SMC5-204ENST00000618375 MCCD1P59942 119 aaPredicted RBP4.51□□□□□ -1.69
SMC5-204ENST00000618375 NR1H3Q13133 447 aa4.51□□□□□ -1.69
SMC5-204ENST00000618375 CC2D2BQ6DHV5 1058 aa4.51□□□□□ -1.69
SMC5-204ENST00000618375 FOXR1Q6PIV2 292 aa4.51□□□□□ -1.69
SMC5-204ENST00000618375 RIPOR1Q6ZS17 1223 aa4.51□□□□□ -1.69
SMC5-204ENST00000618375 CCDC125Q86Z20 511 aa4.51□□□□□ -1.69
SMC5-204ENST00000618375 WWC1Q8IX03 1113 aa4.51□□□□□ -1.69
SMC5-204ENST00000618375 GPR161Q8N6U8 529 aaKnown RBP4.51□□□□□ -1.69
SMC5-204ENST00000618375 BANK1Q8NDB2 785 aa4.51□□□□□ -1.69
SMC5-204ENST00000618375 NANOS1Q8WY41 292 aaKnown RBP4.51□□□□□ -1.69
SMC5-204ENST00000618375 GJD4Q96KN9 370 aaPredicted RBP4.51□□□□□ -1.69
SMC5-204ENST00000618375 SMARCA2P51531 1590 aa4.5□□□□□ -1.69
SMC5-204ENST00000618375 LORP23490 312 aaPredicted RBP4.5□□□□□ -1.69
SMC5-204ENST00000618375 SETQ01105 290 aaPredicted RBP4.5□□□□□ -1.69
SMC5-204ENST00000618375 NFKBIBQ15653 356 aa4.5□□□□□ -1.69
SMC5-204ENST00000618375 TMEM132AQ24JP5 1023 aa4.5□□□□□ -1.69
SMC5-204ENST00000618375 FOXD4L5Q5VV16 416 aaPredicted RBP4.5□□□□□ -1.69
SMC5-204ENST00000618375 CYP2U1Q7Z449 544 aa4.5□□□□□ -1.69
SMC5-204ENST00000618375 PUS7Q96PZ0 661 aaKnown RBP4.5□□□□□ -1.69
SMC5-204ENST00000618375 GAS2L1Q99501 681 aaPredicted RBP4.5□□□□□ -1.69
SMC5-204ENST00000618375 PLCD4Q9BRC7 762 aa4.5□□□□□ -1.69
SMC5-204ENST00000618375 A0A1W2PRU2 124 aa4.49□□□□□ -1.69
SMC5-204ENST00000618375 RNF225M0QZC1 329 aaPredicted RBP4.49□□□□□ -1.69
SMC5-204ENST00000618375 MYCP01106 439 aaPredicted RBP4.49□□□□□ -1.69
SMC5-204ENST00000618375 RNF144AP50876 292 aaPredicted RBP4.49□□□□□ -1.69
SMC5-204ENST00000618375 FAM193AP78312 1265 aa4.49□□□□□ -1.69
SMC5-204ENST00000618375 DCAF11Q8TEB1 546 aa4.49□□□□□ -1.69
SMC5-204ENST00000618375 POLR3GLQ9BT43 218 aa4.49□□□□□ -1.69
SMC5-204ENST00000618375 MARSP56192 900 aaKnown RBP4.48□□□□□ -1.69
SMC5-204ENST00000618375 ERVK-9P63128 1117 aa4.48□□□□□ -1.69
SMC5-204ENST00000618375 KRT76Q01546 638 aa4.48□□□□□ -1.69
SMC5-204ENST00000618375 MAP3K10Q02779 954 aa4.48□□□□□ -1.69
SMC5-204ENST00000618375 RNFT1Q5M7Z0 435 aa4.48□□□□□ -1.69
SMC5-204ENST00000618375 MTMR14Q8NCE2 650 aa4.48□□□□□ -1.69
SMC5-204ENST00000618375 ARHGEF10LQ9HCE6 1279 aa4.48□□□□□ -1.69
SMC5-204ENST00000618375 SNRKQ9NRH2 765 aa4.48□□□□□ -1.69
SMC5-204ENST00000618375 RAB6BQ9NRW1 208 aa4.48□□□□□ -1.69
SMC5-204ENST00000618375 KCNG1Q9UIX4 513 aa4.48□□□□□ -1.69
SMC5-204ENST00000618375 ISY1Q9ULR0 285 aaKnown RBP4.48□□□□□ -1.69
SMC5-204ENST00000618375 CUX2O14529 1486 aa4.48□□□□□ -1.69
SMC5-204ENST00000618375 SENP3-EIF4A1A0A087X0R7 540 aa4.47□□□□□ -1.69
SMC5-204ENST00000618375 H7C1W4 665 aa4.47□□□□□ -1.69
SMC5-204ENST00000618375 TCERG1O14776 1098 aaKnown RBP4.47□□□□□ -1.69
SMC5-204ENST00000618375 GPC1P35052 558 aa4.47□□□□□ -1.69
SMC5-204ENST00000618375 EIF4G2P78344 907 aaKnown RBP eCLIP4.47□□□□□ -1.69
SMC5-204ENST00000618375 POU4F2Q12837 409 aa4.47□□□□□ -1.69
SMC5-204ENST00000618375 SLFNL1Q499Z3 407 aa4.47□□□□□ -1.69
SMC5-204ENST00000618375 KDF1Q8NAX2 398 aaPredicted RBP4.47□□□□□ -1.69
SMC5-204ENST00000618375 TRERF1Q96PN7 1200 aa4.47□□□□□ -1.69
SMC5-204ENST00000618375 DNAJC2Q99543 621 aaKnown RBP4.47□□□□□ -1.69
SMC5-204ENST00000618375 GEMIN8Q9NWZ8 242 aaKnown RBP4.47□□□□□ -1.69
SMC5-204ENST00000618375 ADAMTS8Q9UP79 889 aa4.47□□□□□ -1.69
SMC5-204ENST00000618375 DHX57Q6P158 1386 aaKnown RBP4.46□□□□□ -1.7
SMC5-204ENST00000618375 PHLDB1Q86UU1 1377 aa4.46□□□□□ -1.7
SMC5-204ENST00000618375 GPR25O00155 361 aa4.46□□□□□ -1.7
SMC5-204ENST00000618375 ADAMTS2O95450 1211 aa4.46□□□□□ -1.7
SMC5-204ENST00000618375 SCTRP47872 440 aa4.46□□□□□ -1.7
SMC5-204ENST00000618375 CLN3Q13286 438 aa4.46□□□□□ -1.7
SMC5-204ENST00000618375 RALBP1Q15311 655 aa4.46□□□□□ -1.7
SMC5-204ENST00000618375 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.46□□□□□ -1.7
SMC5-204ENST00000618375 TSPYL1Q9H0U9 437 aa4.46□□□□□ -1.7
SMC5-204ENST00000618375 TIMMDC1Q9NPL8 285 aa4.46□□□□□ -1.7
SMC5-204ENST00000618375 ENAMQ9NRM1 1142 aa4.46□□□□□ -1.7
SMC5-204ENST00000618375 TBC1D2BQ9UPU7 963 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms