RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 UPF3BQ9BZI7 483 aaKnown RBP21.87■■□□□ 1.09
AC008878.3-201ENST00000617428 TSPY26PQ9H489 355 aa21.87■■□□□ 1.09
AC008878.3-201ENST00000617428 FAM83GA6ND36 823 aa21.87■■□□□ 1.09
AC008878.3-201ENST00000617428 CASTP20810 708 aaKnown RBP21.87■■□□□ 1.09
AC008878.3-201ENST00000617428 SCAF11Q99590 1463 aaKnown RBP21.87■■□□□ 1.09
AC008878.3-201ENST00000617428 MPHOSPH10O00566 681 aaKnown RBP21.86■■□□□ 1.09
AC008878.3-201ENST00000617428 POLR3DP05423 398 aaPredicted RBP21.86■■□□□ 1.09
AC008878.3-201ENST00000617428 FAM135AQ9P2D6 1515 aa21.86■■□□□ 1.09
AC008878.3-201ENST00000617428 U3KPZ7 1027 aaPredicted RBP21.86■■□□□ 1.09
AC008878.3-201ENST00000617428 PIP4K2AP48426 406 aaPredicted RBP21.86■■□□□ 1.09
AC008878.3-201ENST00000617428 ATP5J2-PTCD1G3V325 749 aa21.85■■□□□ 1.09
AC008878.3-201ENST00000617428 HSP90AA2PQ14568 343 aaPredicted RBP21.85■■□□□ 1.09
AC008878.3-201ENST00000617428 FAM13BQ9NYF5 915 aa21.85■■□□□ 1.09
AC008878.3-201ENST00000617428 DZIP1Q86YF9 867 aaKnown RBP21.85■■□□□ 1.09
AC008878.3-201ENST00000617428 CRACR2BQ8N4Y2 399 aaPredicted RBP21.85■■□□□ 1.09
AC008878.3-201ENST00000617428 MKNK2Q9HBH9 465 aa21.85■■□□□ 1.09
AC008878.3-201ENST00000617428 ANKRD18BA2A2Z9 1011 aa21.84■■□□□ 1.09
AC008878.3-201ENST00000617428 HSP90AB2PQ58FF8 381 aa21.84■■□□□ 1.09
AC008878.3-201ENST00000617428 NAPBQ9H115 298 aa21.84■■□□□ 1.09
AC008878.3-201ENST00000617428 TNMDQ9H2S6 317 aa21.84■■□□□ 1.09
AC008878.3-201ENST00000617428 PRPF40BQ6NWY9 871 aaKnown RBP21.84■■□□□ 1.09
AC008878.3-201ENST00000617428 RPGRQ92834 1020 aaKnown RBP21.84■■□□□ 1.09
AC008878.3-201ENST00000617428 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.84■■□□□ 1.094e-8■■■■■ 335.4
AC008878.3-201ENST00000617428 MAP3K12Q12852 859 aa21.84■■□□□ 1.09
AC008878.3-201ENST00000617428 CCDC173Q0VFZ6 552 aa21.83■■□□□ 1.09
AC008878.3-201ENST00000617428 KRI1Q8N9T8 703 aaKnown RBP21.83■■□□□ 1.09
AC008878.3-201ENST00000617428 FBXO3Q9UK99 471 aa21.83■■□□□ 1.09
AC008878.3-201ENST00000617428 SERPINC1P01008 464 aa21.83■■□□□ 1.08
AC008878.3-201ENST00000617428 ANXA1P04083 346 aa21.83■■□□□ 1.08
AC008878.3-201ENST00000617428 ZNF76P36508 570 aa21.83■■□□□ 1.08
AC008878.3-201ENST00000617428 SPATA32Q96LK8 384 aa21.82■■□□□ 1.08
AC008878.3-201ENST00000617428 ZNF287Q9HBT7 754 aa21.82■■□□□ 1.08
AC008878.3-201ENST00000617428 STIM1Q13586 685 aa21.82■■□□□ 1.08
AC008878.3-201ENST00000617428 CCDC39Q9UFE4 941 aa21.82■■□□□ 1.08
AC008878.3-201ENST00000617428 C6orf229H3BNL8 230 aa21.82■■□□□ 1.08
AC008878.3-201ENST00000617428 SYCP1Q15431 976 aa21.82■■□□□ 1.08
AC008878.3-201ENST00000617428 TEX13AQ9BXU3 409 aaPredicted RBP21.82■■□□□ 1.08
AC008878.3-201ENST00000617428 MAP3K2Q9Y2U5 619 aa21.82■■□□□ 1.08
AC008878.3-201ENST00000617428 SMARCE1Q969G3 411 aa21.82■■□□□ 1.08
AC008878.3-201ENST00000617428 PI4KAP2A4QPH2 592 aa21.81■■□□□ 1.08
AC008878.3-201ENST00000617428 TRIM27P14373 513 aa21.81■■□□□ 1.08
AC008878.3-201ENST00000617428 PI4KAP1Q8N8J0 262 aa21.81■■□□□ 1.08
AC008878.3-201ENST00000617428 CAGE1Q8TC20 777 aa21.81■■□□□ 1.08
AC008878.3-201ENST00000617428 CCDC192P0DO97 292 aa21.81■■□□□ 1.08
AC008878.3-201ENST00000617428 SLC5A1P13866 664 aa21.81■■□□□ 1.08
AC008878.3-201ENST00000617428 LDHAL6AQ6ZMR3 332 aa21.81■■□□□ 1.08
AC008878.3-201ENST00000617428 UBE3BQ7Z3V4 1068 aa21.81■■□□□ 1.08
AC008878.3-201ENST00000617428 RUFY1Q96T51 708 aa21.81■■□□□ 1.08
AC008878.3-201ENST00000617428 PDCL3Q9H2J4 239 aa21.81■■□□□ 1.08
AC008878.3-201ENST00000617428 UBAP1LF5GYI3 381 aa21.81■■□□□ 1.08
AC008878.3-201ENST00000617428 BMP2KQ9NSY1 1161 aaPredicted RBP21.81■■□□□ 1.08
AC008878.3-201ENST00000617428 FERMT3Q86UX7 667 aa21.81■■□□□ 1.08
AC008878.3-201ENST00000617428 CFAP45Q9UL16 551 aa21.81■■□□□ 1.08
AC008878.3-201ENST00000617428 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.8■■□□□ 1.08
AC008878.3-201ENST00000617428 AK7Q96M32 723 aa21.8■■□□□ 1.08
AC008878.3-201ENST00000617428 MSH6P52701 1360 aa21.8■■□□□ 1.08
AC008878.3-201ENST00000617428 KDM5BQ9UGL1 1544 aa21.8■■□□□ 1.08
AC008878.3-201ENST00000617428 GPATCH8Q9UKJ3 1502 aaKnown RBP21.8■■□□□ 1.08
AC008878.3-201ENST00000617428 PAF1Q8N7H5 531 aa21.79■■□□□ 1.08
AC008878.3-201ENST00000617428 WASF1Q92558 559 aa21.79■■□□□ 1.08
AC008878.3-201ENST00000617428 RSPH6AQ9H0K4 717 aa21.79■■□□□ 1.08
AC008878.3-201ENST00000617428 TANGO6Q9C0B7 1094 aa21.79■■□□□ 1.08
AC008878.3-201ENST00000617428 DISP3Q9P2K9 1392 aa21.79■■□□□ 1.08
AC008878.3-201ENST00000617428 SPC24Q8NBT2 197 aa21.79■■□□□ 1.08
AC008878.3-201ENST00000617428 MBIPQ9NS73 344 aa21.79■■□□□ 1.08
AC008878.3-201ENST00000617428 CCDC82Q8N4S0 544 aa21.78■■□□□ 1.08
AC008878.3-201ENST00000617428 RPRD2Q5VT52 1461 aaKnown RBP21.78■■□□□ 1.08
AC008878.3-201ENST00000617428 ZNHIT6Q9NWK9 470 aaKnown RBP21.78■■□□□ 1.08
AC008878.3-201ENST00000617428 NSD2O96028 1365 aa21.78■■□□□ 1.08
AC008878.3-201ENST00000617428 SNRPA1P09661 255 aaKnown RBP21.78■■□□□ 1.08
AC008878.3-201ENST00000617428 ARGLU1Q9NWB6 273 aaPredicted RBP21.78■■□□□ 1.08
AC008878.3-201ENST00000617428 ASXL2Q76L83 1435 aa21.78■■□□□ 1.08
AC008878.3-201ENST00000617428 RANBP6O60518 1105 aaKnown RBP21.78■■□□□ 1.08
AC008878.3-201ENST00000617428 JARID2Q92833 1246 aaPredicted RBP21.77■■□□□ 1.08
AC008878.3-201ENST00000617428 MAP3K1Q13233 1512 aa21.77■■□□□ 1.08
AC008878.3-201ENST00000617428 TOM1O60784 492 aa21.77■■□□□ 1.08
AC008878.3-201ENST00000617428 NKTRP30414 1462 aaKnown RBP21.77■■□□□ 1.08
AC008878.3-201ENST00000617428 CCDC83Q8IWF9 413 aa21.77■■□□□ 1.08
AC008878.3-201ENST00000617428 SNRKQ9NRH2 765 aa21.77■■□□□ 1.08
AC008878.3-201ENST00000617428 CWC25Q9NXE8 425 aaPredicted RBP21.77■■□□□ 1.08
AC008878.3-201ENST00000617428 NPHP3Q7Z494 1330 aa21.77■■□□□ 1.08
AC008878.3-201ENST00000617428 SKAP1Q86WV1 359 aa21.77■■□□□ 1.07
AC008878.3-201ENST00000617428 PTPRCP08575 1304 aa21.77■■□□□ 1.07
AC008878.3-201ENST00000617428 DACH1Q9UI36 760 aa21.76■■□□□ 1.07
AC008878.3-201ENST00000617428 MPNDQ8N594 471 aa21.76■■□□□ 1.07
AC008878.3-201ENST00000617428 UHRF1BP1LA0JNW5 1464 aa21.75■■□□□ 1.07
AC008878.3-201ENST00000617428 ZNF444Q8N0Y2 327 aaPredicted RBP21.75■■□□□ 1.07
AC008878.3-201ENST00000617428 PLCH2O75038 1416 aa21.75■■□□□ 1.07
AC008878.3-201ENST00000617428 CDC5LQ99459 802 aaKnown RBP21.75■■□□□ 1.07
AC008878.3-201ENST00000617428 RFC4P35249 363 aa21.74■■□□□ 1.07
AC008878.3-201ENST00000617428 ATP10BO94823 1461 aa21.74■■□□□ 1.07
AC008878.3-201ENST00000617428 ZCRB1Q8TBF4 217 aaKnown RBP21.74■■□□□ 1.07
AC008878.3-201ENST00000617428 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
AC008878.3-201ENST00000617428 ZNF213O14771 459 aa21.74■■□□□ 1.07
AC008878.3-201ENST00000617428 ANKRD13DQ6ZTN6 518 aa21.74■■□□□ 1.07
AC008878.3-201ENST00000617428 DDX46Q7L014 1031 aaKnown RBP21.74■■□□□ 1.07
AC008878.3-201ENST00000617428 PPFIBP1Q86W92 1011 aa21.74■■□□□ 1.07
AC008878.3-201ENST00000617428 IQCA1Q86XH1 822 aa21.74■■□□□ 1.07
AC008878.3-201ENST00000617428 CTCFLQ8NI51 663 aaPredicted RBP21.74■■□□□ 1.07
AC008878.3-201ENST00000617428 SEC63Q9UGP8 760 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms