RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 KRT28Q7Z3Y7 464 aa14.24□□□□□ -0.13
PCDHGA9-202ENST00000616887 CHD1LQ86WJ1 897 aa14.24□□□□□ -0.13
PCDHGA9-202ENST00000616887 SLKQ9H2G2 1235 aaPredicted RBP14.24□□□□□ -0.13
PCDHGA9-202ENST00000616887 ZC3H6P61129 1189 aaKnown RBP14.23□□□□□ -0.13
PCDHGA9-202ENST00000616887 RGPD2P0DJD1 1756 aa14.22□□□□□ -0.13
PCDHGA9-202ENST00000616887 GOLGA6L3A6NEY3 463 aa14.22□□□□□ -0.13
PCDHGA9-202ENST00000616887 PIP4K2BP78356 416 aa14.22□□□□□ -0.13
PCDHGA9-202ENST00000616887 INTS3Q68E01 1043 aaKnown RBP14.22□□□□□ -0.13
PCDHGA9-202ENST00000616887 ARHGEF25Q86VW2 580 aa14.22□□□□□ -0.13
PCDHGA9-202ENST00000616887 KCNH5Q8NCM2 988 aa14.22□□□□□ -0.13
PCDHGA9-202ENST00000616887 LRRC37A3O60309 1634 aa14.22□□□□□ -0.13
PCDHGA9-202ENST00000616887 ATP10DQ9P241 1426 aa14.21□□□□□ -0.14
PCDHGA9-202ENST00000616887 KCNQ3O43525 872 aa14.21□□□□□ -0.14
PCDHGA9-202ENST00000616887 MFAP1P55081 439 aaKnown RBP14.21□□□□□ -0.14
PCDHGA9-202ENST00000616887 PXDNQ92626 1479 aa14.2□□□□□ -0.14
PCDHGA9-202ENST00000616887 APBB1O00213 710 aa14.2□□□□□ -0.14
PCDHGA9-202ENST00000616887 CABLES1Q8TDN4 633 aa14.2□□□□□ -0.14
PCDHGA9-202ENST00000616887 ANKRD24Q8TF21 1146 aa14.2□□□□□ -0.14
PCDHGA9-202ENST00000616887 GZF1Q9H116 711 aaPredicted RBP14.2□□□□□ -0.14
PCDHGA9-202ENST00000616887 MPRIPQ6WCQ1 1025 aa14.2□□□□□ -0.14
PCDHGA9-202ENST00000616887 PTPRCP08575 1304 aa14.19□□□□□ -0.14
PCDHGA9-202ENST00000616887 TAF7Q15545 349 aaPredicted RBP14.19□□□□□ -0.14
PCDHGA9-202ENST00000616887 ROBO1Q9Y6N7 1651 aa14.18□□□□□ -0.14
PCDHGA9-202ENST00000616887 HTATSF1O43719 755 aaKnown RBP14.18□□□□□ -0.14
PCDHGA9-202ENST00000616887 CEP85Q6P2H3 762 aa14.18□□□□□ -0.14
PCDHGA9-202ENST00000616887 ZNF530Q6P9A1 599 aaPredicted RBP14.18□□□□□ -0.14
PCDHGA9-202ENST00000616887 BRINP3Q76B58 766 aa14.18□□□□□ -0.14
PCDHGA9-202ENST00000616887 TBC1D32Q96NH3 1257 aa14.18□□□□□ -0.14
PCDHGA9-202ENST00000616887 HAP1P54257 671 aaPredicted RBP14.18□□□□□ -0.14
PCDHGA9-202ENST00000616887 FLIIQ13045 1269 aa14.18□□□□□ -0.14
PCDHGA9-202ENST00000616887 FKBP5Q13451 457 aaPredicted RBP14.18□□□□□ -0.14
PCDHGA9-202ENST00000616887 C16orf71Q8IYS4 520 aaPredicted RBP14.18□□□□□ -0.14
PCDHGA9-202ENST00000616887 GCC1Q96CN9 775 aa14.18□□□□□ -0.14
PCDHGA9-202ENST00000616887 SLIT3O75094 1523 aa14.17□□□□□ -0.14
PCDHGA9-202ENST00000616887 TRPM3Q9HCF6 1732 aaPredicted RBP14.17□□□□□ -0.14
PCDHGA9-202ENST00000616887 OTUD7AQ8TE49 926 aaPredicted RBP14.17□□□□□ -0.14
PCDHGA9-202ENST00000616887 PDCL3Q9H2J4 239 aa14.17□□□□□ -0.14
PCDHGA9-202ENST00000616887 ANXA1P04083 346 aa14.17□□□□□ -0.14
PCDHGA9-202ENST00000616887 EIF2S2P20042 333 aaKnown RBP14.17□□□□□ -0.14
PCDHGA9-202ENST00000616887 STK31Q9BXU1 1019 aa14.17□□□□□ -0.14
PCDHGA9-202ENST00000616887 PHAXQ9H814 394 aaKnown RBP14.17□□□□□ -0.14
PCDHGA9-202ENST00000616887 NPHP3Q7Z494 1330 aa14.17□□□□□ -0.14
PCDHGA9-202ENST00000616887 CEMIPQ8WUJ3 1361 aa14.16□□□□□ -0.14
PCDHGA9-202ENST00000616887 FSD2A1L4K1 749 aa14.16□□□□□ -0.14
PCDHGA9-202ENST00000616887 SMARCA5O60264 1052 aaPredicted RBP14.16□□□□□ -0.14
PCDHGA9-202ENST00000616887 CHMP4BQ9H444 224 aaKnown RBP14.16□□□□□ -0.14
PCDHGA9-202ENST00000616887 ANKRD44Q8N8A2 993 aa14.16□□□□□ -0.14
PCDHGA9-202ENST00000616887 MED1Q15648 1581 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA9-202ENST00000616887 HDGFL1Q5TGJ6 251 aa14.15□□□□□ -0.14
PCDHGA9-202ENST00000616887 PRDM4Q9UKN5 801 aa14.15□□□□□ -0.14
PCDHGA9-202ENST00000616887 ESPNB1AK53 854 aa14.15□□□□□ -0.14
PCDHGA9-202ENST00000616887 CHRNA2Q15822 529 aa14.15□□□□□ -0.14
PCDHGA9-202ENST00000616887 CCDC30Q5VVM6 783 aa14.14□□□□□ -0.15
PCDHGA9-202ENST00000616887 UPF2Q9HAU5 1272 aaKnown RBP14.14□□□□□ -0.15
PCDHGA9-202ENST00000616887 FAM208AQ9UK61 1670 aaKnown RBP14.14□□□□□ -0.15
PCDHGA9-202ENST00000616887 ERBB3P21860 1342 aa14.14□□□□□ -0.15
PCDHGA9-202ENST00000616887 ERBB4Q15303 1308 aa14.14□□□□□ -0.15
PCDHGA9-202ENST00000616887 PRAMEF22A3QJZ6 481 aa14.14□□□□□ -0.15
PCDHGA9-202ENST00000616887 BECN1Q14457 450 aa14.14□□□□□ -0.15
PCDHGA9-202ENST00000616887 DCTPP1Q9H773 170 aa14.14□□□□□ -0.15
PCDHGA9-202ENST00000616887 GSPT1P15170 499 aaKnown RBP14.13□□□□□ -0.15
PCDHGA9-202ENST00000616887 PHRF1Q9P1Y6 1649 aaKnown RBP14.13□□□□□ -0.15
PCDHGA9-202ENST00000616887 EIF4A1P60842 406 aaKnown RBP14.13□□□□□ -0.15
PCDHGA9-202ENST00000616887 PDE4CQ08493 712 aa14.13□□□□□ -0.15
PCDHGA9-202ENST00000616887 C22orf23Q9BZE7 217 aa14.13□□□□□ -0.15
PCDHGA9-202ENST00000616887 TEFQ10587 303 aa14.12□□□□□ -0.15
PCDHGA9-202ENST00000616887 AKAP4Q5JQC9 854 aa14.12□□□□□ -0.15
PCDHGA9-202ENST00000616887 FBXO41Q8TF61 875 aa14.12□□□□□ -0.15
PCDHGA9-202ENST00000616887 BTBD11A6QL63 1104 aa14.12□□□□□ -0.15
PCDHGA9-202ENST00000616887 PLEKHO1Q53GL0 409 aaPredicted RBP14.12□□□□□ -0.15
PCDHGA9-202ENST00000616887 BMP2KLQ5H9B9 411 aa14.12□□□□□ -0.15
PCDHGA9-202ENST00000616887 CHPF2Q9P2E5 772 aa14.12□□□□□ -0.15
PCDHGA9-202ENST00000616887 RGPD5Q99666 1765 aa14.12□□□□□ -0.15
PCDHGA9-202ENST00000616887 ALS2Q96Q42 1657 aa14.12□□□□□ -0.15
PCDHGA9-202ENST00000616887 TPM2P07951 284 aa14.11□□□□□ -0.15
PCDHGA9-202ENST00000616887 PLEKHM2Q8IWE5 1019 aa14.11□□□□□ -0.15
PCDHGA9-202ENST00000616887 SPRYD3Q8NCJ5 442 aa14.11□□□□□ -0.15
PCDHGA9-202ENST00000616887 RNMTO43148 476 aaKnown RBP14.11□□□□□ -0.15
PCDHGA9-202ENST00000616887 ANTXR1Q9H6X2 564 aa14.11□□□□□ -0.15
PCDHGA9-202ENST00000616887 NLRP2Q9NX02 1062 aa14.11□□□□□ -0.15
PCDHGA9-202ENST00000616887 NHSL1Q5SYE7 1610 aa14.11□□□□□ -0.15
PCDHGA9-202ENST00000616887 CCT4P50991 539 aaKnown RBP14.1□□□□□ -0.15
PCDHGA9-202ENST00000616887 C1orf141Q5JVX7 400 aa14.1□□□□□ -0.15
PCDHGA9-202ENST00000616887 RPAP2Q8IXW5 612 aaPredicted RBP14.1□□□□□ -0.15
PCDHGA9-202ENST00000616887 TBC1D2Q9BYX2 928 aa14.1□□□□□ -0.15
PCDHGA9-202ENST00000616887 EXOC6BQ9Y2D4 811 aa14.1□□□□□ -0.15
PCDHGA9-202ENST00000616887 NCAPD2Q15021 1401 aa14.1□□□□□ -0.15
PCDHGA9-202ENST00000616887 PNMA6EA0A0J9YXQ4 647 aa14.1□□□□□ -0.15
PCDHGA9-202ENST00000616887 TBC1D9Q6ZT07 1266 aa14.1□□□□□ -0.15
PCDHGA9-202ENST00000616887 TSHZ3Q63HK5 1081 aa14.09□□□□□ -0.15
PCDHGA9-202ENST00000616887 TNS3Q68CZ2 1445 aa14.09□□□□□ -0.15
PCDHGA9-202ENST00000616887 AHDC1Q5TGY3 1603 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA9-202ENST00000616887 MRE11P49959 708 aa14.09□□□□□ -0.15
PCDHGA9-202ENST00000616887 FGD1P98174 961 aa14.09□□□□□ -0.15
PCDHGA9-202ENST00000616887 PHLPP1O60346 1717 aa14.08□□□□□ -0.16
PCDHGA9-202ENST00000616887 PROSER3Q2NL68 480 aa14.08□□□□□ -0.16
PCDHGA9-202ENST00000616887 LRRFIP2Q9Y608 721 aaKnown RBP14.08□□□□□ -0.16
PCDHGA9-202ENST00000616887 AMOTQ4VCS5 1084 aa14.08□□□□□ -0.16
PCDHGA9-202ENST00000616887 GNAI2P04899 355 aa14.07□□□□□ -0.16
PCDHGA9-202ENST00000616887 SLC39A6Q13433 755 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms