RNA–Protein interactions for RNA: ENST00000616833.5

CLN5-203, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-203ENST00000616833 CABLES1Q8TDN4 633 aa27.16■■□□□ 1.94
CLN5-203ENST00000616833 ANTXR1Q9H6X2 564 aa27.16■■□□□ 1.94
CLN5-203ENST00000616833 USP54Q70EL1 1684 aa27.15■■□□□ 1.94
CLN5-203ENST00000616833 PNMA6EA0A0J9YXQ4 647 aa27.15■■□□□ 1.94
CLN5-203ENST00000616833 HSPA2P54652 639 aa27.15■■□□□ 1.94
CLN5-203ENST00000616833 TEFQ10587 303 aa27.14■■□□□ 1.94
CLN5-203ENST00000616833 FOXD4L1Q9NU39 408 aa27.14■■□□□ 1.94
CLN5-203ENST00000616833 TTC22Q5TAA0 569 aa27.14■■□□□ 1.93
CLN5-203ENST00000616833 PXDNQ92626 1479 aa27.13■■□□□ 1.93
CLN5-203ENST00000616833 GNAI2P04899 355 aa27.13■■□□□ 1.93
CLN5-203ENST00000616833 CHPF2Q9P2E5 772 aa27.13■■□□□ 1.93
CLN5-203ENST00000616833 LRRFIP2Q9Y608 721 aaKnown RBP27.13■■□□□ 1.93
CLN5-203ENST00000616833 PRAMEF22A3QJZ6 481 aa27.13■■□□□ 1.93
CLN5-203ENST00000616833 BTBD11A6QL63 1104 aa27.13■■□□□ 1.93
CLN5-203ENST00000616833 FAM208AQ9UK61 1670 aaKnown RBP27.12■■□□□ 1.93
CLN5-203ENST00000616833 EIF4A1P60842 406 aaKnown RBP27.12■■□□□ 1.93
CLN5-203ENST00000616833 CDC45O75419 566 aa27.11■■□□□ 1.93
CLN5-203ENST00000616833 CD2BP2O95400 341 aaKnown RBP27.11■■□□□ 1.93
CLN5-203ENST00000616833 RBM25P49756 843 aaKnown RBP27.1■■□□□ 1.93
CLN5-203ENST00000616833 HSCBQ8IWL3 235 aa27.1■■□□□ 1.93
CLN5-203ENST00000616833 KIF2CQ99661 725 aa27.1■■□□□ 1.93
CLN5-203ENST00000616833 C19orf44Q9H6X5 657 aa27.1■■□□□ 1.93
CLN5-203ENST00000616833 CEMIPQ8WUJ3 1361 aa27.09■■□□□ 1.93
CLN5-203ENST00000616833 SDSP20132 328 aa27.09■■□□□ 1.93
CLN5-203ENST00000616833 PLEKHO1Q53GL0 409 aaPredicted RBP27.09■■□□□ 1.93
CLN5-203ENST00000616833 C1orf167Q5SNV9 1468 aa27.08■■□□□ 1.93
CLN5-203ENST00000616833 C1orf141Q5JVX7 400 aa27.08■■□□□ 1.93
CLN5-203ENST00000616833 HMMRO75330 724 aa27.08■■□□□ 1.92
CLN5-203ENST00000616833 AKAP4Q5JQC9 854 aa27.08■■□□□ 1.92
CLN5-203ENST00000616833 ATF3P18847 181 aa27.07■■□□□ 1.92
CLN5-203ENST00000616833 CHRNA2Q15822 529 aa27.07■■□□□ 1.92
CLN5-203ENST00000616833 USP44Q9H0E7 712 aa27.07■■□□□ 1.92
CLN5-203ENST00000616833 RGPD5Q99666 1765 aa27.06■■□□□ 1.92
CLN5-203ENST00000616833 TMEM94Q12767 1356 aa27.06■■□□□ 1.92
CLN5-203ENST00000616833 RNMTO43148 476 aaKnown RBP27.06■■□□□ 1.92
CLN5-203ENST00000616833 GSE1Q14687 1217 aa27.05■■□□□ 1.92
CLN5-203ENST00000616833 NLRP2Q9NX02 1062 aa27.05■■□□□ 1.92
CLN5-203ENST00000616833 PI4KAP2A4QPH2 592 aa27.04■■□□□ 1.92
CLN5-203ENST00000616833 PI4KAP1Q8N8J0 262 aa27.04■■□□□ 1.92
CLN5-203ENST00000616833 PROSER3Q2NL68 480 aa27.04■■□□□ 1.92
CLN5-203ENST00000616833 GNAI3P08754 354 aa27.03■■□□□ 1.92
CLN5-203ENST00000616833 UBTFL1P0CB47 393 aaPredicted RBP27.03■■□□□ 1.92
CLN5-203ENST00000616833 IL1RAPL2Q9NP60 686 aa27.03■■□□□ 1.92
CLN5-203ENST00000616833 NBPF7P0C2Y1 421 aaPredicted RBP27.02■■□□□ 1.92
CLN5-203ENST00000616833 SLC39A6Q13433 755 aa27.01■■□□□ 1.92
CLN5-203ENST00000616833 HSP90AB1P08238 724 aaKnown RBP27■■□□□ 1.91
CLN5-203ENST00000616833 ATP8B2P98198 1209 aa27■■□□□ 1.91
CLN5-203ENST00000616833 PDE1AP54750 535 aa26.99■■□□□ 1.91
CLN5-203ENST00000616833 CSB-PGBD3P0DP91 1061 aa26.99■■□□□ 1.91
CLN5-203ENST00000616833 SLIT3O75094 1523 aa26.99■■□□□ 1.91
CLN5-203ENST00000616833 SRCIN1Q9C0H9 1055 aa26.98■■□□□ 1.91
CLN5-203ENST00000616833 BABAM1Q9NWV8 329 aa26.98■■□□□ 1.91
CLN5-203ENST00000616833 TRPM3Q9HCF6 1732 aaPredicted RBP26.98■■□□□ 1.91
CLN5-203ENST00000616833 ERBB3P21860 1342 aa26.98■■□□□ 1.91
CLN5-203ENST00000616833 AMOTQ4VCS5 1084 aa26.98■■□□□ 1.91
CLN5-203ENST00000616833 LRRCC1Q9C099 1032 aa26.98■■□□□ 1.91
CLN5-203ENST00000616833 AIMP1Q12904 312 aaKnown RBP26.97■■□□□ 1.91
CLN5-203ENST00000616833 PPP1R42Q7Z4L9 355 aa26.96■■□□□ 1.91
CLN5-203ENST00000616833 NUTM1Q86Y26 1132 aa26.96■■□□□ 1.91
CLN5-203ENST00000616833 STRCP1A6NGW2 1772 aa26.96■■□□□ 1.91
CLN5-203ENST00000616833 MED1Q15648 1581 aaPredicted RBP26.95■■□□□ 1.9
CLN5-203ENST00000616833 MAP4K4O95819 1239 aaPredicted RBP26.95■■□□□ 1.9
CLN5-203ENST00000616833 DNAAF4Q8WXU2 420 aa26.95■■□□□ 1.9
CLN5-203ENST00000616833 RILPL2Q969X0 211 aa26.95■■□□□ 1.9
CLN5-203ENST00000616833 HSP90AA1P07900 732 aaKnown RBP26.94■■□□□ 1.9
CLN5-203ENST00000616833 PIP4K2AP48426 406 aaPredicted RBP26.94■■□□□ 1.9
CLN5-203ENST00000616833 ARXQ96QS3 562 aa26.94■■□□□ 1.9
CLN5-203ENST00000616833 MST1RQ04912 1400 aa26.94■■□□□ 1.9
CLN5-203ENST00000616833 KDM3BQ7LBC6 1761 aa26.93■■□□□ 1.9
CLN5-203ENST00000616833 TRIM6-TRIM34B2RNG4 842 aa26.93■■□□□ 1.9
CLN5-203ENST00000616833 SURF6O75683 361 aaKnown RBP26.93■■□□□ 1.9
CLN5-203ENST00000616833 RAPGEF4Q8WZA2 1011 aa26.93■■□□□ 1.9
CLN5-203ENST00000616833 USP26Q9BXU7 913 aa26.93■■□□□ 1.9
CLN5-203ENST00000616833 LMO7Q8WWI1 1683 aa26.92■■□□□ 1.9
CLN5-203ENST00000616833 SRGAP3O43295 1099 aa26.92■■□□□ 1.9
CLN5-203ENST00000616833 GIGYF1O75420 1035 aaPredicted RBP26.92■■□□□ 1.9
CLN5-203ENST00000616833 CWF19L2Q2TBE0 894 aaKnown RBP26.92■■□□□ 1.9
CLN5-203ENST00000616833 BEND3Q5T5X7 828 aa26.92■■□□□ 1.9
CLN5-203ENST00000616833 CHMP5Q9NZZ3 219 aa26.92■■□□□ 1.9
CLN5-203ENST00000616833 MAP3K2Q9Y2U5 619 aa26.92■■□□□ 1.9
CLN5-203ENST00000616833 ADCY9O60503 1353 aa26.91■■□□□ 1.9
CLN5-203ENST00000616833 MX1P20591 662 aa26.91■■□□□ 1.9
CLN5-203ENST00000616833 UNC5CLQ8IV45 518 aa26.91■■□□□ 1.9
CLN5-203ENST00000616833 NFATC2IPQ8NCF5 419 aa26.9■■□□□ 1.9
CLN5-203ENST00000616833 SNX21Q969T3 373 aa26.9■■□□□ 1.9
CLN5-203ENST00000616833 PHRF1Q9P1Y6 1649 aaKnown RBP26.9■■□□□ 1.9
CLN5-203ENST00000616833 IBTKQ9P2D0 1353 aaPredicted RBP26.9■■□□□ 1.9
CLN5-203ENST00000616833 CACNA1FO60840 1977 aa26.9■■□□□ 1.9
CLN5-203ENST00000616833 MYL6BP14649 208 aa26.89■■□□□ 1.9
CLN5-203ENST00000616833 GZF1Q9H116 711 aaPredicted RBP26.89■■□□□ 1.9
CLN5-203ENST00000616833 SOS1Q07889 1333 aaPredicted RBP26.88■■□□□ 1.89
CLN5-203ENST00000616833 DBF4Q9UBU7 674 aaPredicted RBP26.88■■□□□ 1.89
CLN5-203ENST00000616833 CASC1Q6TDU7 716 aa26.88■■□□□ 1.89
CLN5-203ENST00000616833 K7ELQ4 463 aaPredicted RBP26.86■■□□□ 1.89
CLN5-203ENST00000616833 SALL3Q9BXA9 1300 aa26.86■■□□□ 1.89
CLN5-203ENST00000616833 MCM4P33991 863 aa26.85■■□□□ 1.89
CLN5-203ENST00000616833 SSH3Q8TE77 659 aa26.85■■□□□ 1.89
CLN5-203ENST00000616833 TATP17735 454 aaPredicted RBP26.85■■□□□ 1.89
CLN5-203ENST00000616833 ALS2Q96Q42 1657 aa26.85■■□□□ 1.89
CLN5-203ENST00000616833 MEGF6O75095 1541 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms