RNA–Protein interactions for RNA: ENST00000616821.4

HIP1-207, Transcript of huntingtin interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene HIP1, Length 3,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1-207ENST00000616821 RBM28Q9NW13 759 aaKnown RBP12.23□□□□□ -0.45
HIP1-207ENST00000616821 FYB1O15117 783 aa12.22□□□□□ -0.45
HIP1-207ENST00000616821 MBD3O95983 291 aa12.22□□□□□ -0.45
HIP1-207ENST00000616821 RNF217Q8TC41 542 aa12.22□□□□□ -0.45
HIP1-207ENST00000616821 DCTPP1Q9H773 170 aa12.22□□□□□ -0.45
HIP1-207ENST00000616821 RPGRIP1LQ68CZ1 1315 aa12.22□□□□□ -0.45
HIP1-207ENST00000616821 TSPYL6Q8N831 410 aa12.22□□□□□ -0.45
HIP1-207ENST00000616821 RNF214Q8ND24 703 aa12.22□□□□□ -0.45
HIP1-207ENST00000616821 TULP2O00295 520 aa12.21□□□□□ -0.45
HIP1-207ENST00000616821 ELL2O00472 640 aaPredicted RBP12.21□□□□□ -0.45
HIP1-207ENST00000616821 SAFB2Q14151 953 aaKnown RBP eCLIP12.21□□□□□ -0.45
HIP1-207ENST00000616821 CT47A1Q5JQC4 288 aaPredicted RBP12.21□□□□□ -0.45
HIP1-207ENST00000616821 C16orf71Q8IYS4 520 aaPredicted RBP12.21□□□□□ -0.45
HIP1-207ENST00000616821 API5Q9BZZ5 524 aaKnown RBP12.21□□□□□ -0.45
HIP1-207ENST00000616821 NSFL1CQ9UNZ2 370 aaKnown RBP12.21□□□□□ -0.45
HIP1-207ENST00000616821 ARID4AP29374 1257 aaPredicted RBP12.21□□□□□ -0.46
HIP1-207ENST00000616821 PRKAR2BP31323 418 aa12.21□□□□□ -0.46
HIP1-207ENST00000616821 SRPK2P78362 688 aaKnown RBP12.21□□□□□ -0.46
HIP1-207ENST00000616821 CTR9Q6PD62 1173 aa12.21□□□□□ -0.46
HIP1-207ENST00000616821 CHAMP1Q96JM3 812 aa12.21□□□□□ -0.46
HIP1-207ENST00000616821 KIAA2012Q0VF49 1180 aa12.2□□□□□ -0.46
HIP1-207ENST00000616821 OTUD6BQ8N6M0 293 aa12.2□□□□□ -0.46
HIP1-207ENST00000616821 SDSP20132 328 aa12.2□□□□□ -0.46
HIP1-207ENST00000616821 GNAI1P63096 354 aa12.2□□□□□ -0.46
HIP1-207ENST00000616821 FOXD4L5Q5VV16 416 aaPredicted RBP12.2□□□□□ -0.46
HIP1-207ENST00000616821 FOXD4L4Q8WXT5 416 aaPredicted RBP12.2□□□□□ -0.46
HIP1-207ENST00000616821 THUMPD2Q9BTF0 503 aaKnown RBP12.2□□□□□ -0.46
HIP1-207ENST00000616821 ZBTB12Q9Y330 459 aaPredicted RBP12.2□□□□□ -0.46
HIP1-207ENST00000616821 PNPLA6Q8IY17 1366 aa12.19□□□□□ -0.46
HIP1-207ENST00000616821 REC8O95072 547 aa12.19□□□□□ -0.46
HIP1-207ENST00000616821 NBPF6Q5VWK0 638 aa12.19□□□□□ -0.46
HIP1-207ENST00000616821 NBPF5PQ86XG9 351 aaPredicted RBP12.19□□□□□ -0.46
HIP1-207ENST00000616821 NBPF4Q96M43 638 aa12.19□□□□□ -0.46
HIP1-207ENST00000616821 TSPY26PQ9H489 355 aa12.19□□□□□ -0.46
HIP1-207ENST00000616821 NFE2L2Q16236 605 aa12.19□□□□□ -0.46
HIP1-207ENST00000616821 STK26Q9P289 416 aa12.19□□□□□ -0.46
HIP1-207ENST00000616821 PPLO60437 1756 aa12.19□□□□□ -0.46
HIP1-207ENST00000616821 IFT57Q9NWB7 429 aa12.18□□□□□ -0.46
HIP1-207ENST00000616821 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
HIP1-207ENST00000616821 GLI2P10070 1586 aa12.18□□□□□ -0.46
HIP1-207ENST00000616821 GABPB1Q06547 395 aaPredicted RBP12.18□□□□□ -0.46
HIP1-207ENST00000616821 TWISTNBQ3B726 338 aaPredicted RBP12.18□□□□□ -0.46
HIP1-207ENST00000616821 NBPF10Q6P3W6 841 aaKnown RBP12.18□□□□□ -0.46
HIP1-207ENST00000616821 MYRIPQ8NFW9 859 aa12.18□□□□□ -0.46
HIP1-207ENST00000616821 OTUD7AQ8TE49 926 aaPredicted RBP12.18□□□□□ -0.46
HIP1-207ENST00000616821 LMTK2Q8IWU2 1503 aa12.18□□□□□ -0.46
HIP1-207ENST00000616821 NUTM2DQ5VT03 806 aaPredicted RBP12.17□□□□□ -0.46
HIP1-207ENST00000616821 SIRT1Q96EB6 747 aa12.17□□□□□ -0.46
HIP1-207ENST00000616821 KIF24Q5T7B8 1368 aa12.17□□□□□ -0.46
HIP1-207ENST00000616821 ATAD2Q6PL18 1390 aa12.17□□□□□ -0.46
HIP1-207ENST00000616821 CAPN2P17655 700 aa12.17□□□□□ -0.46
HIP1-207ENST00000616821 MLECQ14165 292 aa12.17□□□□□ -0.46
HIP1-207ENST00000616821 SYAP1Q96A49 352 aaPredicted RBP12.17□□□□□ -0.46
HIP1-207ENST00000616821 MBIPQ9NS73 344 aa12.17□□□□□ -0.46
HIP1-207ENST00000616821 FAM135BQ49AJ0 1406 aa12.17□□□□□ -0.46
HIP1-207ENST00000616821 CALRP27797 417 aaKnown RBP12.17□□□□□ -0.46
HIP1-207ENST00000616821 PHACTR3Q96KR7 559 aa12.17□□□□□ -0.46
HIP1-207ENST00000616821 LRRC7Q96NW7 1537 aa12.16□□□□□ -0.46
HIP1-207ENST00000616821 ANKRD44Q8N8A2 993 aa12.16□□□□□ -0.46
HIP1-207ENST00000616821 ERC2O15083 957 aa12.16□□□□□ -0.46
HIP1-207ENST00000616821 BRD1O95696 1058 aa12.15□□□□□ -0.46
HIP1-207ENST00000616821 ZNF853P0CG23 659 aa12.15□□□□□ -0.46
HIP1-207ENST00000616821 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.15□□□□□ -0.46
HIP1-207ENST00000616821 TMX3Q96JJ7 454 aa12.15□□□□□ -0.46
HIP1-207ENST00000616821 PRIMPOLQ96LW4 560 aa12.15□□□□□ -0.46
HIP1-207ENST00000616821 TDO2P48775 406 aa12.15□□□□□ -0.46
HIP1-207ENST00000616821 NEK4P51957 841 aa12.15□□□□□ -0.46
HIP1-207ENST00000616821 C8orf58Q8NAV2 365 aa12.15□□□□□ -0.46
HIP1-207ENST00000616821 ARHGEF28Q8N1W1 1705 aaKnown RBP12.15□□□□□ -0.46
HIP1-207ENST00000616821 NPATQ14207 1427 aa12.15□□□□□ -0.46
HIP1-207ENST00000616821 SMARCA5O60264 1052 aaPredicted RBP12.15□□□□□ -0.47
HIP1-207ENST00000616821 HMOX1P09601 288 aa12.15□□□□□ -0.47
HIP1-207ENST00000616821 HMGN5P82970 282 aaKnown RBP12.15□□□□□ -0.47
HIP1-207ENST00000616821 ZKSCAN8Q15776 578 aaPredicted RBP12.15□□□□□ -0.47
HIP1-207ENST00000616821 ATP2B3Q16720 1220 aa12.15□□□□□ -0.47
HIP1-207ENST00000616821 HDGFL2Q7Z4V5 671 aaPredicted RBP12.15□□□□□ -0.47
HIP1-207ENST00000616821 RPAP2Q8IXW5 612 aaPredicted RBP12.15□□□□□ -0.47
HIP1-207ENST00000616821 MRVI1Q9Y6F6 885 aa12.15□□□□□ -0.47
HIP1-207ENST00000616821 ZFYVE9O95405 1425 aa12.15□□□□□ -0.47
HIP1-207ENST00000616821 ZBTB7CA1YPR0 619 aa12.14□□□□□ -0.47
HIP1-207ENST00000616821 APBB1O00213 710 aa12.14□□□□□ -0.47
HIP1-207ENST00000616821 MCM2P49736 904 aa12.14□□□□□ -0.47
HIP1-207ENST00000616821 BSDC1Q9NW68 430 aaPredicted RBP12.14□□□□□ -0.47
HIP1-207ENST00000616821 BRMS1Q9HCU9 246 aa12.14□□□□□ -0.47
HIP1-207ENST00000616821 PIBF1Q8WXW3 757 aa12.13□□□□□ -0.47
HIP1-207ENST00000616821 CDC42BPGQ6DT37 1551 aa12.13□□□□□ -0.47
HIP1-207ENST00000616821 NOLC1Q14978 699 aaKnown RBP eCLIP12.13□□□□□ -0.47
HIP1-207ENST00000616821 YEATS2Q9ULM3 1422 aa12.13□□□□□ -0.47
HIP1-207ENST00000616821 KIF1CO43896 1103 aaKnown RBP12.13□□□□□ -0.47
HIP1-207ENST00000616821 UVSSAQ2YD98 709 aa12.13□□□□□ -0.47
HIP1-207ENST00000616821 CEP85Q6P2H3 762 aa12.13□□□□□ -0.47
HIP1-207ENST00000616821 ZNF513Q8N8E2 541 aaPredicted RBP12.13□□□□□ -0.47
HIP1-207ENST00000616821 FAM184AQ8NB25 1140 aa12.13□□□□□ -0.47
HIP1-207ENST00000616821 MNS1Q8NEH6 495 aa12.13□□□□□ -0.47
HIP1-207ENST00000616821 MINK1Q8N4C8 1332 aaPredicted RBP12.12□□□□□ -0.47
HIP1-207ENST00000616821 CUL4AQ13619 759 aa12.12□□□□□ -0.47
HIP1-207ENST00000616821 POLKQ9UBT6 870 aa12.12□□□□□ -0.47
HIP1-207ENST00000616821 KNDC1Q76NI1 1749 aa12.12□□□□□ -0.47
HIP1-207ENST00000616821 GGT6Q6P531 493 aa12.12□□□□□ -0.47
HIP1-207ENST00000616821 TSC1Q92574 1164 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms