RNA–Protein interactions for RNA: ENST00000616706.4

LINC00598-207, long intergenic non-protein coding RNA 598, humanhuman

TSL 1 (best) BASIC

Gene LINC00598, Length 2,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-207ENST00000616706 AMOTQ4VCS5 1084 aa13.07□□□□□ -0.32
LINC00598-207ENST00000616706 NGLY1Q96IV0 654 aa13.07□□□□□ -0.32
LINC00598-207ENST00000616706 C8orf37Q96NL8 207 aa13.07□□□□□ -0.32
LINC00598-207ENST00000616706 CARD10Q9BWT7 1032 aa13.07□□□□□ -0.32
LINC00598-207ENST00000616706 ABCC6O95255 1503 aa13.07□□□□□ -0.32
LINC00598-207ENST00000616706 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
LINC00598-207ENST00000616706 KRT24Q2M2I5 525 aa13.06□□□□□ -0.32
LINC00598-207ENST00000616706 ZNF530Q6P9A1 599 aaPredicted RBP13.06□□□□□ -0.32
LINC00598-207ENST00000616706 RGS12O14924 1447 aa13.06□□□□□ -0.32
LINC00598-207ENST00000616706 CHL1O00533 1208 aa13.06□□□□□ -0.32
LINC00598-207ENST00000616706 RTL5Q5HYW3 569 aaPredicted RBP13.06□□□□□ -0.32
LINC00598-207ENST00000616706 CACNA1FO60840 1977 aa13.05□□□□□ -0.32
LINC00598-207ENST00000616706 LMO7Q8WWI1 1683 aa13.05□□□□□ -0.32
LINC00598-207ENST00000616706 C1orf115Q9H7X2 142 aa13.05□□□□□ -0.32
LINC00598-207ENST00000616706 N4BP2Q86UW6 1770 aaPredicted RBP13.05□□□□□ -0.32
LINC00598-207ENST00000616706 NCAPD2Q15021 1401 aa13.05□□□□□ -0.32
LINC00598-207ENST00000616706 DEKP35659 375 aaKnown RBP13.04□□□□□ -0.32
LINC00598-207ENST00000616706 C1orf141Q5JVX7 400 aa13.04□□□□□ -0.32
LINC00598-207ENST00000616706 DAXXQ9UER7 740 aaPredicted RBP13.04□□□□□ -0.32
LINC00598-207ENST00000616706 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
LINC00598-207ENST00000616706 NUCB1Q02818 461 aa13.04□□□□□ -0.32
LINC00598-207ENST00000616706 MEX3CQ5U5Q3 659 aaKnown RBP13.04□□□□□ -0.32
LINC00598-207ENST00000616706 CCDC9Q9Y3X0 531 aaKnown RBP13.04□□□□□ -0.32
LINC00598-207ENST00000616706 AKAP4Q5JQC9 854 aa13.03□□□□□ -0.32
LINC00598-207ENST00000616706 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
LINC00598-207ENST00000616706 IL17REQ8NFR9 667 aa13.03□□□□□ -0.32
LINC00598-207ENST00000616706 TBC1D32Q96NH3 1257 aa13.03□□□□□ -0.32
LINC00598-207ENST00000616706 API5Q9BZZ5 524 aaKnown RBP13.03□□□□□ -0.32
LINC00598-207ENST00000616706 LGR6Q9HBX8 967 aa13.03□□□□□ -0.32
LINC00598-207ENST00000616706 SPG7Q9UQ90 795 aa13.03□□□□□ -0.32
LINC00598-207ENST00000616706 COL14A1Q05707 1796 aaKnown RBP13.03□□□□□ -0.32
LINC00598-207ENST00000616706 HTATSF1O43719 755 aaKnown RBP13.03□□□□□ -0.32
LINC00598-207ENST00000616706 IL2RBP14784 551 aa13.03□□□□□ -0.32
LINC00598-207ENST00000616706 CHMP4BQ9H444 224 aaKnown RBP13.03□□□□□ -0.32
LINC00598-207ENST00000616706 MIS18AQ9NYP9 233 aa13.03□□□□□ -0.32
LINC00598-207ENST00000616706 MAP3K5Q99683 1374 aa13.02□□□□□ -0.32
LINC00598-207ENST00000616706 SIRT2Q8IXJ6 389 aa13.02□□□□□ -0.33
LINC00598-207ENST00000616706 MEGF6O75095 1541 aa13.02□□□□□ -0.33
LINC00598-207ENST00000616706 CHD1LQ86WJ1 897 aa13.01□□□□□ -0.33
LINC00598-207ENST00000616706 ZCRB1Q8TBF4 217 aaKnown RBP13.01□□□□□ -0.33
LINC00598-207ENST00000616706 LNPKQ9C0E8 428 aa13.01□□□□□ -0.33
LINC00598-207ENST00000616706 UNC5CLQ8IV45 518 aa13.01□□□□□ -0.33
LINC00598-207ENST00000616706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.01□□□□□ -0.33
LINC00598-207ENST00000616706 IFNL2Q8IZJ0 200 aa13□□□□□ -0.33
LINC00598-207ENST00000616706 DDX54Q8TDD1 881 aaKnown RBP13□□□□□ -0.33
LINC00598-207ENST00000616706 GCC1Q96CN9 775 aa13□□□□□ -0.33
LINC00598-207ENST00000616706 UPF2Q9HAU5 1272 aaKnown RBP13□□□□□ -0.33
LINC00598-207ENST00000616706 ATP10DQ9P241 1426 aa13□□□□□ -0.33
LINC00598-207ENST00000616706 CYP27B1O15528 508 aa12.99□□□□□ -0.33
LINC00598-207ENST00000616706 RNMTO43148 476 aaKnown RBP12.99□□□□□ -0.33
LINC00598-207ENST00000616706 PHKG2P15735 406 aa12.99□□□□□ -0.33
LINC00598-207ENST00000616706 INTS3Q68E01 1043 aaKnown RBP12.99□□□□□ -0.33
LINC00598-207ENST00000616706 USP21Q9UK80 565 aa12.99□□□□□ -0.33
LINC00598-207ENST00000616706 LRP6O75581 1613 aa12.99□□□□□ -0.33
LINC00598-207ENST00000616706 KDM3BQ7LBC6 1761 aa12.99□□□□□ -0.33
LINC00598-207ENST00000616706 NFKBIBQ15653 356 aa12.98□□□□□ -0.33
LINC00598-207ENST00000616706 FNBP4Q8N3X1 1017 aaPredicted RBP12.98□□□□□ -0.33
LINC00598-207ENST00000616706 TSPYL4Q9UJ04 414 aa12.98□□□□□ -0.33
LINC00598-207ENST00000616706 SPATA31A1Q5TZJ5 1347 aa12.98□□□□□ -0.33
LINC00598-207ENST00000616706 TEFQ10587 303 aa12.98□□□□□ -0.33
LINC00598-207ENST00000616706 TAF7Q15545 349 aaPredicted RBP12.98□□□□□ -0.33
LINC00598-207ENST00000616706 SLIT2O94813 1529 aa12.98□□□□□ -0.33
LINC00598-207ENST00000616706 PTPRCP08575 1304 aa12.97□□□□□ -0.33
LINC00598-207ENST00000616706 MFAP1P55081 439 aaKnown RBP12.97□□□□□ -0.33
LINC00598-207ENST00000616706 ANKRD45Q5TZF3 282 aa12.97□□□□□ -0.33
LINC00598-207ENST00000616706 OVOS2A0A0G2JMS6 1433 aa12.97□□□□□ -0.33
LINC00598-207ENST00000616706 SPATA31A5Q5VU36 1347 aa12.97□□□□□ -0.33
LINC00598-207ENST00000616706 SPATA31A7Q8IWB4 1347 aa12.97□□□□□ -0.33
LINC00598-207ENST00000616706 PLCH1Q4KWH8 1693 aa12.96□□□□□ -0.33
LINC00598-207ENST00000616706 EXOC5O00471 708 aa12.96□□□□□ -0.33
LINC00598-207ENST00000616706 BECN1Q14457 450 aa12.96□□□□□ -0.33
LINC00598-207ENST00000616706 TUBGCP6Q96RT7 1819 aa12.96□□□□□ -0.34
LINC00598-207ENST00000616706 PCDH11XQ9BZA7 1347 aa12.95□□□□□ -0.34
LINC00598-207ENST00000616706 PCDH11YQ9BZA8 1340 aa12.95□□□□□ -0.34
LINC00598-207ENST00000616706 BCL9LQ86UU0 1499 aa12.95□□□□□ -0.34
LINC00598-207ENST00000616706 C22orf23Q9BZE7 217 aa12.95□□□□□ -0.34
LINC00598-207ENST00000616706 THRAP3Q9Y2W1 955 aaKnown RBP12.95□□□□□ -0.34
LINC00598-207ENST00000616706 CEMIPQ8WUJ3 1361 aa12.95□□□□□ -0.34
LINC00598-207ENST00000616706 AFF2P51816 1311 aa12.95□□□□□ -0.34
LINC00598-207ENST00000616706 SLC4A2P04920 1241 aa12.95□□□□□ -0.34
LINC00598-207ENST00000616706 HSP90AB1P08238 724 aaKnown RBP12.95□□□□□ -0.34
LINC00598-207ENST00000616706 VPS72Q15906 364 aa12.95□□□□□ -0.34
LINC00598-207ENST00000616706 BMP2KLQ5H9B9 411 aa12.95□□□□□ -0.34
LINC00598-207ENST00000616706 DCAF5Q96JK2 942 aa12.95□□□□□ -0.34
LINC00598-207ENST00000616706 BTBD11A6QL63 1104 aa12.94□□□□□ -0.34
LINC00598-207ENST00000616706 FAM98CQ17RN3 349 aaKnown RBP12.94□□□□□ -0.34
LINC00598-207ENST00000616706 G2E3Q7L622 706 aa12.94□□□□□ -0.34
LINC00598-207ENST00000616706 NFATC2IPQ8NCF5 419 aa12.94□□□□□ -0.34
LINC00598-207ENST00000616706 TBC1D2Q9BYX2 928 aa12.94□□□□□ -0.34
LINC00598-207ENST00000616706 ANKRD44Q8N8A2 993 aa12.93□□□□□ -0.34
LINC00598-207ENST00000616706 MEIS3Q99687 375 aa12.93□□□□□ -0.34
LINC00598-207ENST00000616706 CDCA7Q9BWT1 371 aaPredicted RBP12.93□□□□□ -0.34
LINC00598-207ENST00000616706 DCTPP1Q9H773 170 aa12.93□□□□□ -0.34
LINC00598-207ENST00000616706 A0A0G2JS52 829 aa12.92□□□□□ -0.34
LINC00598-207ENST00000616706 KCNQ3O43525 872 aa12.92□□□□□ -0.34
LINC00598-207ENST00000616706 CABP4P57796 275 aa12.92□□□□□ -0.34
LINC00598-207ENST00000616706 DDB1Q16531 1140 aa12.92□□□□□ -0.34
LINC00598-207ENST00000616706 CEP85Q6P2H3 762 aa12.92□□□□□ -0.34
LINC00598-207ENST00000616706 FBXO41Q8TF61 875 aa12.92□□□□□ -0.34
LINC00598-207ENST00000616706 PLEKHG2Q9H7P9 1386 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms