RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352	FAM182B	Q5T319	152 aa		30.04	■■■□□ 2.4
ACACA-238	ENST00000616352	CDCA7L	Q96GN5	454 aa		30.04	■■■□□ 2.4
ACACA-238	ENST00000616352	IFT57	Q9NWB7	429 aa		30.04	■■■□□ 2.4
ACACA-238	ENST00000616352	CFAP44	Q96MT7	982 aa		30.03	■■■□□ 2.4
ACACA-238	ENST00000616352	SLFN5	Q08AF3	891 aa		30.02	■■■□□ 2.4
ACACA-238	ENST00000616352	TAF7	Q15545	349 aa	Predicted RBP	30.02	■■■□□ 2.4
ACACA-238	ENST00000616352	NFATC2IP	Q8NCF5	419 aa		30.01	■■■□□ 2.39
ACACA-238	ENST00000616352	UBR2	Q8IWV8	1755 aa		30.01	■■■□□ 2.39
ACACA-238	ENST00000616352		E9PSI1	815 aa		30	■■■□□ 2.39
ACACA-238	ENST00000616352	CABP4	P57796	275 aa		30	■■■□□ 2.39
ACACA-238	ENST00000616352	GNAI1	P63096	354 aa		30	■■■□□ 2.39
ACACA-238	ENST00000616352	BTAF1	O14981	1849 aa		30	■■■□□ 2.39
ACACA-238	ENST00000616352	CHL1	O00533	1208 aa		30	■■■□□ 2.39
ACACA-238	ENST00000616352	TRMT2A	Q8IZ69	625 aa	Known RBP	30	■■■□□ 2.39
ACACA-238	ENST00000616352	BABAM1	Q9NWV8	329 aa		29.99	■■■□□ 2.39
ACACA-238	ENST00000616352	PRIM1	P49642	420 aa	Known RBP	29.97	■■■□□ 2.39
ACACA-238	ENST00000616352	ACSBG1	Q96GR2	724 aa		29.97	■■■□□ 2.39
ACACA-238	ENST00000616352	LAS1L	Q9Y4W2	734 aa	Known RBP	29.97	■■■□□ 2.39
ACACA-238	ENST00000616352	TMOD3	Q9NYL9	352 aa		29.96	■■■□□ 2.39
ACACA-238	ENST00000616352	FAM196A	Q6ZSG2	479 aa		29.96	■■■□□ 2.39
ACACA-238	ENST00000616352	PIGB	Q92521	554 aa		29.96	■■■□□ 2.39
ACACA-238	ENST00000616352	MBIP	Q9NS73	344 aa		29.96	■■■□□ 2.39
ACACA-238	ENST00000616352	MIS18A	Q9NYP9	233 aa		29.96	■■■□□ 2.39
ACACA-238	ENST00000616352	FANCI	Q9NVI1	1328 aa		29.95	■■■□□ 2.39
ACACA-238	ENST00000616352	BTBD11	A6QL63	1104 aa		29.95	■■■□□ 2.38
ACACA-238	ENST00000616352	MYH16	Q9H6N6	1097 aa		29.95	■■■□□ 2.38
ACACA-238	ENST00000616352	DUSP27	Q5VZP5	1158 aa		29.94	■■■□□ 2.38
ACACA-238	ENST00000616352	TSR2	Q969E8	191 aa	Known RBP	29.94	■■■□□ 2.38
ACACA-238	ENST00000616352	TSPYL4	Q9UJ04	414 aa		29.94	■■■□□ 2.38
ACACA-238	ENST00000616352	KCNQ2	O43526	872 aa		29.93	■■■□□ 2.38
ACACA-238	ENST00000616352	SYTL4	Q96C24	671 aa	Predicted RBP	29.93	■■■□□ 2.38
ACACA-238	ENST00000616352	ZNF790	Q6PG37	636 aa		29.89	■■■□□ 2.38
ACACA-238	ENST00000616352	KCP	Q6ZWJ8	1503 aa		29.89	■■■□□ 2.37
ACACA-238	ENST00000616352	KCNQ3	O43525	872 aa		29.89	■■■□□ 2.37
ACACA-238	ENST00000616352	SLC39A6	Q13433	755 aa		29.89	■■■□□ 2.37
ACACA-238	ENST00000616352	PTF1A	Q7RTS3	328 aa		29.89	■■■□□ 2.37
ACACA-238	ENST00000616352	TNS1	Q9HBL0	1735 aa	Known RBP	29.88	■■■□□ 2.37
ACACA-238	ENST00000616352	C5	P01031	1676 aa		29.86	■■■□□ 2.37
ACACA-238	ENST00000616352	LY75	O60449	1722 aa		29.86	■■■□□ 2.37
ACACA-238	ENST00000616352	ATG3	Q9NT62	314 aa		29.85	■■■□□ 2.37
ACACA-238	ENST00000616352	ASAP1	Q9ULH1	1129 aa		29.85	■■■□□ 2.37
ACACA-238	ENST00000616352	BCL11B	Q9C0K0	894 aa	Predicted RBP	29.85	■■■□□ 2.37
ACACA-238	ENST00000616352	EIF4A1	P60842	406 aa	Known RBP	29.84	■■■□□ 2.37
ACACA-238	ENST00000616352	HEG1	Q9ULI3	1381 aa		29.84	■■■□□ 2.37
ACACA-238	ENST00000616352	ZNF831	Q5JPB2	1677 aa		29.83	■■■□□ 2.37
ACACA-238	ENST00000616352	EXOSC9	Q06265	439 aa	Known RBP	29.82	■■■□□ 2.36
ACACA-238	ENST00000616352	TTC5	Q8N0Z6	440 aa		29.82	■■■□□ 2.36
ACACA-238	ENST00000616352	LAMB4	A4D0S4	1761 aa		29.82	■■■□□ 2.36
ACACA-238	ENST00000616352	CIC	Q96RK0	1608 aa	Predicted RBP	29.81	■■■□□ 2.36
ACACA-238	ENST00000616352	TRIM37	O94972	964 aa		29.81	■■■□□ 2.36
ACACA-238	ENST00000616352	ZNF496	Q96IT1	587 aa	Predicted RBP	29.81	■■■□□ 2.36
ACACA-238	ENST00000616352	KRT24	Q2M2I5	525 aa		29.8	■■■□□ 2.36
ACACA-238	ENST00000616352	C8orf58	Q8NAV2	365 aa		29.79	■■■□□ 2.36
ACACA-238	ENST00000616352	TJP1	Q07157	1748 aa		29.79	■■■□□ 2.36
ACACA-238	ENST00000616352	TSPYL6	Q8N831	410 aa		29.78	■■■□□ 2.36
ACACA-238	ENST00000616352	FMNL2	Q96PY5	1086 aa		29.78	■■■□□ 2.36
ACACA-238	ENST00000616352	CACNA1F	O60840	1977 aa		29.77	■■■□□ 2.36
ACACA-238	ENST00000616352	PALLD	Q8WX93	1383 aa		29.77	■■■□□ 2.36
ACACA-238	ENST00000616352	RGPD3	A6NKT7	1758 aa	Predicted RBP	29.77	■■■□□ 2.36
ACACA-238	ENST00000616352	RGPD4	Q7Z3J3	1758 aa		29.77	■■■□□ 2.36
ACACA-238	ENST00000616352	SMARCC1	Q92922	1105 aa	Predicted RBP	29.77	■■■□□ 2.36
ACACA-238	ENST00000616352	TAF1L	Q8IZX4	1826 aa		29.75	■■■□□ 2.35
ACACA-238	ENST00000616352	PTCD1	O75127	700 aa	Known RBP	29.74	■■■□□ 2.35
ACACA-238	ENST00000616352	GIGYF1	O75420	1035 aa	Predicted RBP	29.74	■■■□□ 2.35
ACACA-238	ENST00000616352	COL5A3	P25940	1745 aa	Predicted RBP	29.74	■■■□□ 2.35
ACACA-238	ENST00000616352	TWISTNB	Q3B726	338 aa	Predicted RBP	29.74	■■■□□ 2.35
ACACA-238	ENST00000616352	SOS1	Q07889	1333 aa	Predicted RBP	29.73	■■■□□ 2.35
ACACA-238	ENST00000616352	ELL2	O00472	640 aa	Predicted RBP	29.73	■■■□□ 2.35
ACACA-238	ENST00000616352	VAMP4	O75379	141 aa		29.72	■■■□□ 2.35
ACACA-238	ENST00000616352	HOXB7	P09629	217 aa		29.72	■■■□□ 2.35
ACACA-238	ENST00000616352	CT47B1	P0C2W7	299 aa	Predicted RBP	29.72	■■■□□ 2.35
ACACA-238	ENST00000616352	VSIG10	Q8N0Z9	540 aa		29.72	■■■□□ 2.35
ACACA-238	ENST00000616352	SLC4A9	Q96Q91	983 aa		29.72	■■■□□ 2.35
ACACA-238	ENST00000616352	RBM42	Q9BTD8	480 aa	Known RBP	29.71	■■■□□ 2.35
ACACA-238	ENST00000616352	PRAMEF22	A3QJZ6	481 aa		29.7	■■■□□ 2.34
ACACA-238	ENST00000616352	SNRPA1	P09661	255 aa	Known RBP	29.7	■■■□□ 2.34
ACACA-238	ENST00000616352	LOC102724428	A0A0B4J2F2	783 aa		29.69	■■■□□ 2.34
ACACA-238	ENST00000616352	SIK1	P57059	783 aa		29.69	■■■□□ 2.34
ACACA-238	ENST00000616352	MYH14	Q7Z406	1995 aa	Known RBP	29.67	■■■□□ 2.34
ACACA-238	ENST00000616352	PLSCR1	O15162	318 aa		29.65	■■■□□ 2.34
ACACA-238	ENST00000616352	ZNF428	Q96B54	188 aa		29.65	■■■□□ 2.34
ACACA-238	ENST00000616352	APBA3	O96018	575 aa		29.64	■■■□□ 2.34
ACACA-238	ENST00000616352	USP16	Q9Y5T5	823 aa		29.64	■■■□□ 2.34
ACACA-238	ENST00000616352	RREB1	Q92766	1687 aa		29.64	■■■□□ 2.34
ACACA-238	ENST00000616352	CENPB	P07199	599 aa	Predicted RBP	29.63	■■■□□ 2.33
ACACA-238	ENST00000616352	ATP6V1A	P38606	617 aa		29.63	■■■□□ 2.33
ACACA-238	ENST00000616352	DNAJC10	Q8IXB1	793 aa		29.63	■■■□□ 2.33
ACACA-238	ENST00000616352	ITPK1	Q13572	414 aa		29.62	■■■□□ 2.33
ACACA-238	ENST00000616352	HDGFL1	Q5TGJ6	251 aa		29.62	■■■□□ 2.33
ACACA-238	ENST00000616352	TEX13A	Q9BXU3	409 aa	Predicted RBP	29.62	■■■□□ 2.33
ACACA-238	ENST00000616352	RARS	P54136	660 aa	Known RBP	29.61	■■■□□ 2.33
ACACA-238	ENST00000616352	RCAN3	Q9UKA8	241 aa		29.6	■■■□□ 2.33
ACACA-238	ENST00000616352	EIF2S2	P20042	333 aa	Known RBP	29.6	■■■□□ 2.33
ACACA-238	ENST00000616352	CCNL1	Q9UK58	526 aa	Predicted RBP	29.6	■■■□□ 2.33
ACACA-238	ENST00000616352	ALDH1L2	Q3SY69	923 aa		29.59	■■■□□ 2.33
ACACA-238	ENST00000616352	CCDC30	Q5VVM6	783 aa		29.59	■■■□□ 2.33
ACACA-238	ENST00000616352	SSH1	Q8WYL5	1049 aa		29.59	■■■□□ 2.33
ACACA-238	ENST00000616352	CHMP4A	Q9BY43	222 aa		29.59	■■■□□ 2.33
ACACA-238	ENST00000616352	CYP19A1	P11511	503 aa	Predicted RBP	29.58	■■■□□ 2.33
ACACA-238	ENST00000616352	PROM2	Q8N271	834 aa		29.58	■■■□□ 2.33

Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms