RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 DNAJC2Q99543 621 aaKnown RBP7.54□□□□□ -1.2
RFC3-203ENST00000616236 TINF2Q9BSI4 451 aa7.54□□□□□ -1.2
RFC3-203ENST00000616236 PRKD2Q9BZL6 878 aa7.54□□□□□ -1.2
RFC3-203ENST00000616236 PCDH10Q9P2E7 1040 aa7.54□□□□□ -1.2
RFC3-203ENST00000616236 WWC3Q9ULE0 1092 aa7.54□□□□□ -1.2
RFC3-203ENST00000616236 ATAD2Q6PL18 1390 aa7.54□□□□□ -1.2
RFC3-203ENST00000616236 TLL1O43897 1013 aa7.53□□□□□ -1.2
RFC3-203ENST00000616236 FZD6O60353 706 aa7.53□□□□□ -1.2
RFC3-203ENST00000616236 SORBS3O60504 671 aa7.53□□□□□ -1.2
RFC3-203ENST00000616236 EIF1AXP47813 144 aaKnown RBP7.53□□□□□ -1.2
RFC3-203ENST00000616236 SCTRP47872 440 aa7.53□□□□□ -1.2
RFC3-203ENST00000616236 FGD1P98174 961 aa7.53□□□□□ -1.2
RFC3-203ENST00000616236 AAMPQ13685 434 aa7.53□□□□□ -1.2
RFC3-203ENST00000616236 C16orf46Q6P387 395 aa7.53□□□□□ -1.2
RFC3-203ENST00000616236 TMC4Q7Z404 712 aa7.53□□□□□ -1.2
RFC3-203ENST00000616236 ZNF511Q8NB15 262 aa7.53□□□□□ -1.2
RFC3-203ENST00000616236 CHMP7Q8WUX9 453 aaPredicted RBP7.53□□□□□ -1.2
RFC3-203ENST00000616236 RNF34Q969K3 372 aa7.53□□□□□ -1.2
RFC3-203ENST00000616236 VTI1BQ9UEU0 232 aa7.53□□□□□ -1.2
RFC3-203ENST00000616236 STAU1O95793 577 aaKnown RBP7.52□□□□□ -1.21
RFC3-203ENST00000616236 DAB2P98082 770 aa7.52□□□□□ -1.21
RFC3-203ENST00000616236 FANCCQ00597 558 aa7.52□□□□□ -1.21
RFC3-203ENST00000616236 PSMD2Q13200 908 aa7.52□□□□□ -1.21
RFC3-203ENST00000616236 ADGRD1Q6QNK2 874 aa7.52□□□□□ -1.21
RFC3-203ENST00000616236 DMRTB1Q96MA1 342 aa7.52□□□□□ -1.21
RFC3-203ENST00000616236 SETDB2Q96T68 719 aa7.52□□□□□ -1.21
RFC3-203ENST00000616236 C1QTNF2Q9BXJ5 285 aa7.52□□□□□ -1.21
RFC3-203ENST00000616236 TGIF2Q9GZN2 237 aa7.52□□□□□ -1.21
RFC3-203ENST00000616236 METTL5Q9NRN9 209 aaKnown RBP7.52□□□□□ -1.21
RFC3-203ENST00000616236 ADH1BP00325 375 aa7.51□□□□□ -1.21
RFC3-203ENST00000616236 IGHA2P01877 340 aa7.51□□□□□ -1.21
RFC3-203ENST00000616236 SLC43A3Q8NBI5 491 aa7.51□□□□□ -1.21
RFC3-203ENST00000616236 DHX38Q92620 1227 aaKnown RBP7.51□□□□□ -1.21
RFC3-203ENST00000616236 TSPAN10Q9H1Z9 355 aaPredicted RBP7.51□□□□□ -1.21
RFC3-203ENST00000616236 CCSER2Q9H7U1 834 aa7.51□□□□□ -1.21
RFC3-203ENST00000616236 CAPN10Q9HC96 672 aa7.51□□□□□ -1.21
RFC3-203ENST00000616236 PRKAG2Q9UGJ0 569 aa7.51□□□□□ -1.21
RFC3-203ENST00000616236 BACH1O14867 736 aa7.5□□□□□ -1.21
RFC3-203ENST00000616236 GPR182O15218 404 aa7.5□□□□□ -1.21
RFC3-203ENST00000616236 HRO43593 1189 aa7.5□□□□□ -1.21
RFC3-203ENST00000616236 NCLP19338 710 aaKnown RBP7.5□□□□□ -1.21
RFC3-203ENST00000616236 ITGAEP38570 1179 aa7.5□□□□□ -1.21
RFC3-203ENST00000616236 GDF10P55107 478 aa7.5□□□□□ -1.21
RFC3-203ENST00000616236 ALKBH2Q6NS38 261 aa7.5□□□□□ -1.21
RFC3-203ENST00000616236 FAM129BQ96TA1 746 aa7.5□□□□□ -1.21
RFC3-203ENST00000616236 LNPKQ9C0E8 428 aa7.5□□□□□ -1.21
RFC3-203ENST00000616236 ACBD3Q9H3P7 528 aa7.5□□□□□ -1.21
RFC3-203ENST00000616236 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.5□□□□□ -1.217e-6■■■■■ 74.5
RFC3-203ENST00000616236 WBP1LQ9NX94 342 aa7.5□□□□□ -1.21
RFC3-203ENST00000616236 STIM2Q9P246 746 aa7.5□□□□□ -1.21
RFC3-203ENST00000616236 SERTAD1Q9UHV2 236 aa7.5□□□□□ -1.21
RFC3-203ENST00000616236 CDV3Q9UKY7 258 aaKnown RBP7.5□□□□□ -1.21
RFC3-203ENST00000616236 A0A1W2PRU2 124 aa7.49□□□□□ -1.21
RFC3-203ENST00000616236 ANKRD62A6NC57 917 aa7.49□□□□□ -1.21
RFC3-203ENST00000616236 TNFRSF10BO14763 440 aa7.49□□□□□ -1.21
RFC3-203ENST00000616236 ATP2B1P20020 1258 aa7.49□□□□□ -1.21
RFC3-203ENST00000616236 ZNF76P36508 570 aa7.49□□□□□ -1.21
RFC3-203ENST00000616236 SCNN1DP51172 638 aa7.49□□□□□ -1.21
RFC3-203ENST00000616236 EPHA4P54764 986 aa7.49□□□□□ -1.21
RFC3-203ENST00000616236 ATP2B2Q01814 1243 aa7.49□□□□□ -1.21
RFC3-203ENST00000616236 TRMT44Q8IYL2 757 aaKnown RBP7.49□□□□□ -1.21
RFC3-203ENST00000616236 WNT2BQ93097 391 aa7.49□□□□□ -1.21
RFC3-203ENST00000616236 STAC3Q96MF2 364 aa7.49□□□□□ -1.21
RFC3-203ENST00000616236 KCTD15Q96SI1 283 aaPredicted RBP7.49□□□□□ -1.21
RFC3-203ENST00000616236 ESF1Q9H501 851 aaKnown RBP7.49□□□□□ -1.21
RFC3-203ENST00000616236 ERVH48-1M5A8F1 160 aa7.48□□□□□ -1.21
RFC3-203ENST00000616236 PPP1R12BO60237 982 aaPredicted RBP7.48□□□□□ -1.21
RFC3-203ENST00000616236 GTF2F1P35269 517 aaKnown RBP eCLIP7.48□□□□□ -1.21
RFC3-203ENST00000616236 PDE3BQ13370 1112 aa7.48□□□□□ -1.21
RFC3-203ENST00000616236 COX20Q5RI15 118 aa7.48□□□□□ -1.21
RFC3-203ENST00000616236 NIF3L1Q9GZT8 377 aa7.48□□□□□ -1.21
RFC3-203ENST00000616236 CUEDC1Q9NWM3 386 aaPredicted RBP7.48□□□□□ -1.21
RFC3-203ENST00000616236 ZPR1O75312 459 aa7.47□□□□□ -1.21
RFC3-203ENST00000616236 TNNI2P48788 182 aa7.47□□□□□ -1.21
RFC3-203ENST00000616236 EMP3P54852 163 aa7.47□□□□□ -1.21
RFC3-203ENST00000616236 LSM11P83369 360 aaKnown RBP eCLIP7.47□□□□□ -1.21
RFC3-203ENST00000616236 NOP9Q86U38 636 aaKnown RBP7.47□□□□□ -1.21
RFC3-203ENST00000616236 ANKRD13AQ8IZ07 590 aa7.47□□□□□ -1.21
RFC3-203ENST00000616236 ALKBH8Q96BT7 664 aaKnown RBP7.47□□□□□ -1.21
RFC3-203ENST00000616236 HIRIP3Q9BW71 556 aaPredicted RBP7.47□□□□□ -1.21
RFC3-203ENST00000616236 SLC6A16Q9GZN6 736 aa7.47□□□□□ -1.21
RFC3-203ENST00000616236 NLRP2Q9NX02 1062 aa7.47□□□□□ -1.21
RFC3-203ENST00000616236 IQSEC3Q9UPP2 1182 aaPredicted RBP7.47□□□□□ -1.21
RFC3-203ENST00000616236 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.47□□□□□ -1.21
RFC3-203ENST00000616236 PNMA6FA0A0J9YX94 578 aa7.46□□□□□ -1.22
RFC3-203ENST00000616236 WASLO00401 505 aaPredicted RBP7.46□□□□□ -1.22
RFC3-203ENST00000616236 INHAP05111 366 aa7.46□□□□□ -1.22
RFC3-203ENST00000616236 ERVK-9P63128 1117 aa7.46□□□□□ -1.22
RFC3-203ENST00000616236 SH3BP2P78314 561 aa7.46□□□□□ -1.22
RFC3-203ENST00000616236 ENOX2Q16206 610 aaKnown RBP7.46□□□□□ -1.22
RFC3-203ENST00000616236 INTS6LQ5JSJ4 861 aaKnown RBP7.46□□□□□ -1.22
RFC3-203ENST00000616236 TBCELQ5QJ74 424 aa7.46□□□□□ -1.22
RFC3-203ENST00000616236 ATCAYQ86WG3 371 aa7.46□□□□□ -1.22
RFC3-203ENST00000616236 CHMP4AQ9BY43 222 aa7.46□□□□□ -1.22
RFC3-203ENST00000616236 OSBPL3Q9H4L5 887 aa7.46□□□□□ -1.22
RFC3-203ENST00000616236 EMILIN1Q9Y6C2 1016 aa7.46□□□□□ -1.22
RFC3-203ENST00000616236 FAM205CA6NFA0 338 aa7.45□□□□□ -1.22
RFC3-203ENST00000616236 ZBTB39O15060 712 aa7.45□□□□□ -1.22
RFC3-203ENST00000616236 GNL2Q13823 731 aaKnown RBP7.45□□□□□ -1.22
RFC3-203ENST00000616236 CCDC144BQ3MJ40 725 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms