RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 ZSCAN12O43309 604 aa15.57■□□□□ 0.08
NLRC3-204ENST00000615877 ZPR1O75312 459 aa15.57■□□□□ 0.08
NLRC3-204ENST00000615877 SFPQP23246 707 aaKnown RBP eCLIP15.57■□□□□ 0.08
NLRC3-204ENST00000615877 SSFA2P28290 1259 aa15.57■□□□□ 0.08
NLRC3-204ENST00000615877 TNPO1Q92973 898 aaKnown RBP15.57■□□□□ 0.08
NLRC3-204ENST00000615877 RAD54L2Q9Y4B4 1467 aa15.57■□□□□ 0.08
NLRC3-204ENST00000615877 CCDC83Q8IWF9 413 aa15.57■□□□□ 0.08
NLRC3-204ENST00000615877 PTCD1O75127 700 aaKnown RBP15.56■□□□□ 0.08
NLRC3-204ENST00000615877 POLR3DP05423 398 aaPredicted RBP15.56■□□□□ 0.08
NLRC3-204ENST00000615877 PLCD3Q8N3E9 789 aa15.56■□□□□ 0.08
NLRC3-204ENST00000615877 SHTN1A0MZ66 631 aa15.56■□□□□ 0.08
NLRC3-204ENST00000615877 CA8P35219 290 aa15.56■□□□□ 0.08
NLRC3-204ENST00000615877 SLC4A8Q2Y0W8 1093 aa15.56■□□□□ 0.08
NLRC3-204ENST00000615877 DDX11Q96FC9 970 aa15.56■□□□□ 0.08
NLRC3-204ENST00000615877 CRACR2AQ9BSW2 395 aa15.56■□□□□ 0.08
NLRC3-204ENST00000615877 TBC1D2Q9BYX2 928 aa15.56■□□□□ 0.08
NLRC3-204ENST00000615877 ZSCAN25Q6NSZ9 544 aa15.56■□□□□ 0.08
NLRC3-204ENST00000615877 CLIP2Q9UDT6 1046 aa15.56■□□□□ 0.08
NLRC3-204ENST00000615877 ERICH3Q5RHP9 1530 aa15.56■□□□□ 0.08
NLRC3-204ENST00000615877 THEMISQ8N1K5 641 aaPredicted RBP15.56■□□□□ 0.08
NLRC3-204ENST00000615877 C20orf194Q5TEA3 1177 aa15.55■□□□□ 0.08
NLRC3-204ENST00000615877 NUTM1Q86Y26 1132 aa15.55■□□□□ 0.08
NLRC3-204ENST00000615877 GIMAP7Q8NHV1 300 aa15.55■□□□□ 0.08
NLRC3-204ENST00000615877 ANO10Q9NW15 660 aa15.55■□□□□ 0.08
NLRC3-204ENST00000615877 PLEKHH1Q9ULM0 1364 aa15.55■□□□□ 0.08
NLRC3-204ENST00000615877 EHBP1L1Q8N3D4 1523 aa15.55■□□□□ 0.08
NLRC3-204ENST00000615877 EIF5P55010 431 aaKnown RBP15.55■□□□□ 0.08
NLRC3-204ENST00000615877 FERMT3Q86UX7 667 aa15.55■□□□□ 0.08
NLRC3-204ENST00000615877 CTNNA3Q9UI47 895 aa15.55■□□□□ 0.08
NLRC3-204ENST00000615877 MINDY4BA8MYZ0 360 aa15.54■□□□□ 0.08
NLRC3-204ENST00000615877 INCENPQ9NQS7 918 aa15.54■□□□□ 0.08
NLRC3-204ENST00000615877 CALCOCO1Q9P1Z2 691 aa15.54■□□□□ 0.08
NLRC3-204ENST00000615877 TAF4BQ92750 862 aa15.54■□□□□ 0.08
NLRC3-204ENST00000615877 PSMD1Q99460 953 aa15.54■□□□□ 0.08
NLRC3-204ENST00000615877 ANKRD30BQ9BXX2 1392 aa15.54■□□□□ 0.08
NLRC3-204ENST00000615877 ECM2O94769 699 aaPredicted RBP15.54■□□□□ 0.08
NLRC3-204ENST00000615877 TNNT1P13805 278 aa15.54■□□□□ 0.08
NLRC3-204ENST00000615877 PLEKHH2Q8IVE3 1493 aa15.54■□□□□ 0.08
NLRC3-204ENST00000615877 URI1O94763 535 aaPredicted RBP15.54■□□□□ 0.08
NLRC3-204ENST00000615877 USP25Q9UHP3 1055 aa15.53■□□□□ 0.08
NLRC3-204ENST00000615877 UBA5Q9GZZ9 404 aa15.53■□□□□ 0.08
NLRC3-204ENST00000615877 METTL24Q5JXM2 366 aa15.53■□□□□ 0.08
NLRC3-204ENST00000615877 ANKLE2Q86XL3 938 aa15.53■□□□□ 0.08
NLRC3-204ENST00000615877 WASF1Q92558 559 aa15.53■□□□□ 0.08
NLRC3-204ENST00000615877 DESP17661 470 aa15.53■□□□□ 0.08
NLRC3-204ENST00000615877 TTC16Q8NEE8 873 aa15.53■□□□□ 0.08
NLRC3-204ENST00000615877 BMP2KQ9NSY1 1161 aaPredicted RBP15.53■□□□□ 0.08
NLRC3-204ENST00000615877 PPP4R3BQ5MIZ7 849 aa15.53■□□□□ 0.08
NLRC3-204ENST00000615877 USHBP1Q8N6Y0 703 aa15.53■□□□□ 0.08
NLRC3-204ENST00000615877 KIF5CO60282 957 aa15.52■□□□□ 0.08
NLRC3-204ENST00000615877 GBP2P32456 591 aaPredicted RBP15.52■□□□□ 0.08
NLRC3-204ENST00000615877 MAP9Q49MG5 647 aa15.52■□□□□ 0.08
NLRC3-204ENST00000615877 AIDAQ96BJ3 306 aa15.52■□□□□ 0.08
NLRC3-204ENST00000615877 MX1P20591 662 aa15.52■□□□□ 0.08
NLRC3-204ENST00000615877 NKTRP30414 1462 aaKnown RBP15.52■□□□□ 0.08
NLRC3-204ENST00000615877 SMARCA5O60264 1052 aaPredicted RBP15.52■□□□□ 0.07
NLRC3-204ENST00000615877 SCAND2PQ9GZW5 306 aaPredicted RBP15.52■□□□□ 0.07
NLRC3-204ENST00000615877 CEP131Q9UPN4 1083 aa15.52■□□□□ 0.07
NLRC3-204ENST00000615877 ZNF397Q8NF99 534 aaPredicted RBP15.52■□□□□ 0.07
NLRC3-204ENST00000615877 POLR3GO15318 223 aaPredicted RBP15.52■□□□□ 0.07
NLRC3-204ENST00000615877 MCM5P33992 734 aa15.51■□□□□ 0.07
NLRC3-204ENST00000615877 PRPF40BQ6NWY9 871 aaKnown RBP15.51■□□□□ 0.07
NLRC3-204ENST00000615877 EXOC6BQ9Y2D4 811 aa15.51■□□□□ 0.07
NLRC3-204ENST00000615877 JAKMIP3Q5VZ66 844 aa15.51■□□□□ 0.07
NLRC3-204ENST00000615877 TMPOP42166 694 aaKnown RBP15.51■□□□□ 0.07
NLRC3-204ENST00000615877 CCDC96Q2M329 555 aa15.51■□□□□ 0.07
NLRC3-204ENST00000615877 MPRIPQ6WCQ1 1025 aa15.51■□□□□ 0.07
NLRC3-204ENST00000615877 C16orf45Q96MC5 204 aaPredicted RBP15.51■□□□□ 0.07
NLRC3-204ENST00000615877 AQRO60306 1485 aaKnown RBP eCLIP15.51■□□□□ 0.07
NLRC3-204ENST00000615877 C9orf84Q5VXU9 1444 aa15.51■□□□□ 0.07
NLRC3-204ENST00000615877 MKNK2Q9HBH9 465 aa15.51■□□□□ 0.07
NLRC3-204ENST00000615877 CEP126Q9P2H0 1117 aa15.51■□□□□ 0.07
NLRC3-204ENST00000615877 SEC63Q9UGP8 760 aaKnown RBP15.51■□□□□ 0.07
NLRC3-204ENST00000615877 FCHSD2O94868 740 aa15.5■□□□□ 0.07
NLRC3-204ENST00000615877 MCM3P25205 808 aa15.5■□□□□ 0.07
NLRC3-204ENST00000615877 TOP1P11387 765 aaKnown RBP15.5■□□□□ 0.07
NLRC3-204ENST00000615877 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
NLRC3-204ENST00000615877 STARD3NLO95772 234 aa15.5■□□□□ 0.07
NLRC3-204ENST00000615877 TRIM21P19474 475 aaKnown RBP15.5■□□□□ 0.07
NLRC3-204ENST00000615877 RARSP54136 660 aaKnown RBP15.5■□□□□ 0.07
NLRC3-204ENST00000615877 TMOD3Q9NYL9 352 aa15.5■□□□□ 0.07
NLRC3-204ENST00000615877 NFE2L2Q16236 605 aa15.49■□□□□ 0.07
NLRC3-204ENST00000615877 KIF4BQ2VIQ3 1234 aa15.49■□□□□ 0.07
NLRC3-204ENST00000615877 SH2B1Q9NRF2 756 aaPredicted RBP15.49■□□□□ 0.07
NLRC3-204ENST00000615877 TRMT1Q9NXH9 659 aaKnown RBP15.49■□□□□ 0.07
NLRC3-204ENST00000615877 RTEL1-TNFRSF6BF6WH68 1400 aa15.49■□□□□ 0.07
NLRC3-204ENST00000615877 TNIP1Q15025 636 aa15.49■□□□□ 0.07
NLRC3-204ENST00000615877 IMMTQ16891 758 aaKnown RBP15.49■□□□□ 0.07
NLRC3-204ENST00000615877 SPA17Q15506 151 aa15.49■□□□□ 0.07
NLRC3-204ENST00000615877 NEMFO60524 1076 aa15.49■□□□□ 0.07
NLRC3-204ENST00000615877 PPP4R3AQ6IN85 833 aa15.49■□□□□ 0.07
NLRC3-204ENST00000615877 DYNC1I1O14576 645 aa15.48■□□□□ 0.07
NLRC3-204ENST00000615877 ADCY5O95622 1261 aa15.48■□□□□ 0.07
NLRC3-204ENST00000615877 EZRP15311 586 aaKnown RBP15.48■□□□□ 0.07
NLRC3-204ENST00000615877 DZIP1Q86YF9 867 aaKnown RBP15.48■□□□□ 0.07
NLRC3-204ENST00000615877 RPGRQ92834 1020 aaKnown RBP15.48■□□□□ 0.07
NLRC3-204ENST00000615877 CCDC82Q8N4S0 544 aa15.48■□□□□ 0.07
NLRC3-204ENST00000615877 TRERF1Q96PN7 1200 aa15.48■□□□□ 0.07
NLRC3-204ENST00000615877 MYD88Q99836 296 aa15.48■□□□□ 0.07
NLRC3-204ENST00000615877 ZHX1Q9UKY1 873 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms