RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 RAI14Q9P0K7 980 aa11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 ANKRD18BA2A2Z9 1011 aa11.32□□□□□ -0.6
CLTCL1-208ENST00000615606 RFC4P35249 363 aa11.32□□□□□ -0.6
CLTCL1-208ENST00000615606 RBM5P52756 815 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLTCL1-208ENST00000615606 MAP3K19Q56UN5 1328 aa11.32□□□□□ -0.6
CLTCL1-208ENST00000615606 F6X3S4 739 aa11.32□□□□□ -0.6
CLTCL1-208ENST00000615606 CARD14Q9BXL6 1004 aa11.32□□□□□ -0.6
CLTCL1-208ENST00000615606 CWC25Q9NXE8 425 aaPredicted RBP11.32□□□□□ -0.6
CLTCL1-208ENST00000615606 CHMP5Q9NZZ3 219 aa11.32□□□□□ -0.6
CLTCL1-208ENST00000615606 LRP2BPQ9P2M1 347 aa11.32□□□□□ -0.6
CLTCL1-208ENST00000615606 RRP12Q5JTH9 1297 aaKnown RBP11.32□□□□□ -0.6
CLTCL1-208ENST00000615606 AEBP1Q8IUX7 1158 aa11.32□□□□□ -0.6
CLTCL1-208ENST00000615606 FOXD4L6Q3SYB3 417 aaPredicted RBP11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 NCBP3Q53F19 620 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 FOXD4L3Q6VB84 417 aaPredicted RBP11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 CTNNA3Q9UI47 895 aa11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 MAP3K2Q9Y2U5 619 aa11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 DDX49Q9Y6V7 483 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 PLEKHG1Q9ULL1 1385 aa11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 EXOC6BQ9Y2D4 811 aa11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 TPD52L1Q16890 204 aaPredicted RBP11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 BTG4Q9NY30 223 aa11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 GOLGA6L3A6NEY3 463 aa11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 GPTP24298 496 aa11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 SLC4A3P48751 1232 aa11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 RABEP1Q15276 862 aa11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 DCAF5Q96JK2 942 aa11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 EYA1Q99502 592 aa11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 DNAJC5Q9H3Z4 198 aa11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 HOOK1Q9UJC3 728 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 PCDH11XQ9BZA7 1347 aa11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 PCDH11YQ9BZA8 1340 aa11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 ARAP3Q8WWN8 1544 aa11.31□□□□□ -0.6
CLTCL1-208ENST00000615606 CREBRFQ8IUR6 639 aa11.3□□□□□ -0.6
CLTCL1-208ENST00000615606 ACSBG1Q96GR2 724 aa11.3□□□□□ -0.6
CLTCL1-208ENST00000615606 TMOD2Q9NZR1 351 aa11.3□□□□□ -0.6
CLTCL1-208ENST00000615606 NLRP1Q9C000 1473 aa11.3□□□□□ -0.6
CLTCL1-208ENST00000615606 SBNO1A3KN83 1393 aa11.3□□□□□ -0.6
CLTCL1-208ENST00000615606 PLEKHG3A1L390 1219 aa11.3□□□□□ -0.6
CLTCL1-208ENST00000615606 GLRX3O76003 335 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-208ENST00000615606 ATP6V1AP38606 617 aa11.3□□□□□ -0.6
CLTCL1-208ENST00000615606 MTHFSDQ2M296 383 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-208ENST00000615606 CDC5LQ99459 802 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-208ENST00000615606 ANKIB1Q9P2G1 1089 aa11.3□□□□□ -0.6
CLTCL1-208ENST00000615606 MTMR7Q9Y216 660 aa11.3□□□□□ -0.6
CLTCL1-208ENST00000615606 SLC5A1P13866 664 aa11.3□□□□□ -0.6
CLTCL1-208ENST00000615606 MAP3K5Q99683 1374 aa11.3□□□□□ -0.6
CLTCL1-208ENST00000615606 ANKRD13DQ6ZTN6 518 aa11.29□□□□□ -0.6
CLTCL1-208ENST00000615606 CCDC43Q96MW1 224 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-208ENST00000615606 NPHP4O75161 1426 aaPredicted RBP11.29□□□□□ -0.6
CLTCL1-208ENST00000615606 LRRFIP2Q9Y608 721 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-208ENST00000615606 PI4KAP2A4QPH2 592 aa11.29□□□□□ -0.6
CLTCL1-208ENST00000615606 IDH1O75874 414 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-208ENST00000615606 NEK4P51957 841 aa11.29□□□□□ -0.6
CLTCL1-208ENST00000615606 PI4KAP1Q8N8J0 262 aa11.29□□□□□ -0.6
CLTCL1-208ENST00000615606 UGGT1Q9NYU2 1555 aa11.29□□□□□ -0.6
CLTCL1-208ENST00000615606 NPC1L1Q9UHC9 1359 aa11.29□□□□□ -0.6
CLTCL1-208ENST00000615606 ANKRD1Q15327 319 aa11.29□□□□□ -0.6
CLTCL1-208ENST00000615606 BICD2Q8TD16 824 aa11.29□□□□□ -0.6
CLTCL1-208ENST00000615606 MAP4K4O95819 1239 aaPredicted RBP11.28□□□□□ -0.6
CLTCL1-208ENST00000615606 TRIM27P14373 513 aa11.28□□□□□ -0.6
CLTCL1-208ENST00000615606 CYP46A1Q9Y6A2 500 aa11.28□□□□□ -0.6
CLTCL1-208ENST00000615606 TPM2P07951 284 aa11.28□□□□□ -0.6
CLTCL1-208ENST00000615606 TDO2P48775 406 aa11.28□□□□□ -0.6
CLTCL1-208ENST00000615606 ARHGAP45Q92619 1136 aa11.28□□□□□ -0.6
CLTCL1-208ENST00000615606 ABCF2Q9UG63 623 aa11.28□□□□□ -0.6
CLTCL1-208ENST00000615606 PDCP20941 246 aa11.28□□□□□ -0.6
CLTCL1-208ENST00000615606 DDX46Q7L014 1031 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-208ENST00000615606 NUTM1Q86Y26 1132 aa11.28□□□□□ -0.6
CLTCL1-208ENST00000615606 MX1P20591 662 aa11.28□□□□□ -0.6
CLTCL1-208ENST00000615606 ST5P78524 1137 aa11.28□□□□□ -0.6
CLTCL1-208ENST00000615606 SLC39A6Q13433 755 aa11.27□□□□□ -0.6
CLTCL1-208ENST00000615606 AIDAQ96BJ3 306 aa11.27□□□□□ -0.6
CLTCL1-208ENST00000615606 ERVK-7P63135 1459 aa11.27□□□□□ -0.61
CLTCL1-208ENST00000615606 ZSCAN29Q8IWY8 852 aaPredicted RBP11.27□□□□□ -0.61
CLTCL1-208ENST00000615606 CFAP65Q6ZU64 1925 aaKnown RBP11.27□□□□□ -0.61
CLTCL1-208ENST00000615606 BECN2A8MW95 431 aa11.27□□□□□ -0.61
CLTCL1-208ENST00000615606 ATP5J2-PTCD1G3V325 749 aa11.27□□□□□ -0.61
CLTCL1-208ENST00000615606 GOLGA6L19H0YKK7 550 aa11.27□□□□□ -0.61
CLTCL1-208ENST00000615606 FOSBP53539 338 aa11.27□□□□□ -0.61
CLTCL1-208ENST00000615606 KRT32Q14532 448 aa11.27□□□□□ -0.61
CLTCL1-208ENST00000615606 NBPF6Q5VWK0 638 aa11.27□□□□□ -0.61
CLTCL1-208ENST00000615606 NBPF5PQ86XG9 351 aaPredicted RBP11.27□□□□□ -0.61
CLTCL1-208ENST00000615606 NBPF4Q96M43 638 aa11.27□□□□□ -0.61
CLTCL1-208ENST00000615606 ATP2B2Q01814 1243 aa11.26□□□□□ -0.61
CLTCL1-208ENST00000615606 UBE3BQ7Z3V4 1068 aa11.26□□□□□ -0.61
CLTCL1-208ENST00000615606 SPINK5Q9NQ38 1064 aaPredicted RBP11.26□□□□□ -0.61
CLTCL1-208ENST00000615606 CHPF2Q9P2E5 772 aa11.26□□□□□ -0.61
CLTCL1-208ENST00000615606 CCAR1Q8IX12 1150 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-208ENST00000615606 XAGE3Q8WTP9 111 aa11.26□□□□□ -0.61
CLTCL1-208ENST00000615606 PLXNC1O60486 1568 aa11.26□□□□□ -0.61
CLTCL1-208ENST00000615606 PES1O00541 588 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-208ENST00000615606 CCDC73Q6ZRK6 1079 aa11.26□□□□□ -0.61
CLTCL1-208ENST00000615606 NFATC2IPQ8NCF5 419 aa11.26□□□□□ -0.61
CLTCL1-208ENST00000615606 ALDH1L1O75891 902 aa11.25□□□□□ -0.61
CLTCL1-208ENST00000615606 MAP3K12Q12852 859 aa11.25□□□□□ -0.61
CLTCL1-208ENST00000615606 SOS1Q07889 1333 aaPredicted RBP11.25□□□□□ -0.61
CLTCL1-208ENST00000615606 CCDC69A6NI79 296 aa11.25□□□□□ -0.61
CLTCL1-208ENST00000615606 CCDC152Q4G0S7 254 aa11.25□□□□□ -0.61
CLTCL1-208ENST00000615606 CWC27Q6UX04 472 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms