RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 HTRA3P83110 453 aa10.35□□□□□ -0.75
FAM228B-209ENST00000615135 EFCAB3Q8N7B9 438 aa10.35□□□□□ -0.75
FAM228B-209ENST00000615135 CABP2Q9NPB3 220 aa10.35□□□□□ -0.75
FAM228B-209ENST00000615135 TIMELESSQ9UNS1 1208 aa10.35□□□□□ -0.75
FAM228B-209ENST00000615135 LY75O60449 1722 aa10.34□□□□□ -0.75
FAM228B-209ENST00000615135 PPP1R37O75864 691 aa10.34□□□□□ -0.75
FAM228B-209ENST00000615135 CSB-PGBD3P0DP91 1061 aa10.34□□□□□ -0.75
FAM228B-209ENST00000615135 KCNH5Q8NCM2 988 aa10.33□□□□□ -0.76
FAM228B-209ENST00000615135 STAC3Q96MF2 364 aa10.33□□□□□ -0.76
FAM228B-209ENST00000615135 NMRK2Q9NPI5 230 aa10.33□□□□□ -0.76
FAM228B-209ENST00000615135 IGSF1Q8N6C5 1336 aa10.33□□□□□ -0.76
FAM228B-209ENST00000615135 IL2RBP14784 551 aa10.32□□□□□ -0.76
FAM228B-209ENST00000615135 KCNQ4P56696 695 aa10.32□□□□□ -0.76
FAM228B-209ENST00000615135 PCNTO95613 3336 aa10.32□□□□□ -0.76
FAM228B-209ENST00000615135 HSPA1AP0DMV8 641 aaKnown RBP10.31□□□□□ -0.76
FAM228B-209ENST00000615135 HSPA1BP0DMV9 641 aaKnown RBP10.31□□□□□ -0.76
FAM228B-209ENST00000615135 MSL1Q68DK7 614 aa10.31□□□□□ -0.76
FAM228B-209ENST00000615135 PIK3C2AO00443 1686 aa10.31□□□□□ -0.76
FAM228B-209ENST00000615135 FLAD1Q8NFF5 587 aa10.3□□□□□ -0.76
FAM228B-209ENST00000615135 MS4A3Q96HJ5 214 aa10.3□□□□□ -0.76
FAM228B-209ENST00000615135 C10orf71Q711Q0 1435 aa10.3□□□□□ -0.76
FAM228B-209ENST00000615135 NSD2O96028 1365 aa10.29□□□□□ -0.76
FAM228B-209ENST00000615135 HMGB2P26583 209 aaKnown RBP10.29□□□□□ -0.76
FAM228B-209ENST00000615135 ERBB3P21860 1342 aa10.29□□□□□ -0.76
FAM228B-209ENST00000615135 NFAT5O94916 1531 aa10.28□□□□□ -0.76
FAM228B-209ENST00000615135 ANKRD36BQ8N2N9 1353 aa10.28□□□□□ -0.76
FAM228B-209ENST00000615135 FBXO22Q8NEZ5 403 aa10.28□□□□□ -0.76
FAM228B-209ENST00000615135 YTHDC1Q96MU7 727 aaKnown RBP10.28□□□□□ -0.76
FAM228B-209ENST00000615135 CCNL1Q9UK58 526 aaPredicted RBP10.28□□□□□ -0.76
FAM228B-209ENST00000615135 PRIM1P49642 420 aaKnown RBP10.27□□□□□ -0.77
FAM228B-209ENST00000615135 C16orf71Q8IYS4 520 aaPredicted RBP10.27□□□□□ -0.77
FAM228B-209ENST00000615135 CABP1Q9NZU7 370 aa10.27□□□□□ -0.77
FAM228B-209ENST00000615135 TPRNQ4KMQ1 711 aa10.26□□□□□ -0.77
FAM228B-209ENST00000615135 RYDENQ9NUL5 291 aaKnown RBP10.26□□□□□ -0.77
FAM228B-209ENST00000615135 NLRP2Q9NX02 1062 aa10.26□□□□□ -0.77
FAM228B-209ENST00000615135 USP54Q70EL1 1684 aa10.25□□□□□ -0.77
FAM228B-209ENST00000615135 QRICH2Q9H0J4 1663 aa10.25□□□□□ -0.77
FAM228B-209ENST00000615135 GABBR2O75899 941 aa10.25□□□□□ -0.77
FAM228B-209ENST00000615135 SRPK2P78362 688 aaKnown RBP10.25□□□□□ -0.77
FAM228B-209ENST00000615135 DCAF11Q8TEB1 546 aa10.25□□□□□ -0.77
FAM228B-209ENST00000615135 TTC21BQ7Z4L5 1316 aa10.25□□□□□ -0.77
FAM228B-209ENST00000615135 SMC1BQ8NDV3 1235 aa10.24□□□□□ -0.77
FAM228B-209ENST00000615135 TMEM106CQ9BVX2 250 aa10.24□□□□□ -0.77
FAM228B-209ENST00000615135 TTC21AQ8NDW8 1320 aa10.24□□□□□ -0.77
FAM228B-209ENST00000615135 PLEKHG2Q9H7P9 1386 aa10.24□□□□□ -0.77
FAM228B-209ENST00000615135 KIF13BQ9NQT8 1826 aa10.23□□□□□ -0.77
FAM228B-209ENST00000615135 PXDNLA1KZ92 1463 aa10.23□□□□□ -0.77
FAM228B-209ENST00000615135 DDX54Q8TDD1 881 aaKnown RBP10.23□□□□□ -0.77
FAM228B-209ENST00000615135 MS4A4AQ96JQ5 239 aa10.23□□□□□ -0.77
FAM228B-209ENST00000615135 PRDM10Q9NQV6 1147 aa10.23□□□□□ -0.77
FAM228B-209ENST00000615135 KDM2BQ8NHM5 1336 aa10.23□□□□□ -0.77
FAM228B-209ENST00000615135 C5P01031 1676 aa10.22□□□□□ -0.77
FAM228B-209ENST00000615135 KIAA1551Q9HCM1 1747 aa10.22□□□□□ -0.77
FAM228B-209ENST00000615135 TAF1LQ8IZX4 1826 aa10.22□□□□□ -0.77
FAM228B-209ENST00000615135 TGFB2P61812 414 aa10.22□□□□□ -0.77
FAM228B-209ENST00000615135 SYTL4Q96C24 671 aaPredicted RBP10.22□□□□□ -0.77
FAM228B-209ENST00000615135 USP47Q96K76 1375 aa10.22□□□□□ -0.77
FAM228B-209ENST00000615135 DOT1LQ8TEK3 1739 aa10.21□□□□□ -0.77
FAM228B-209ENST00000615135 SOX12O15370 315 aa10.21□□□□□ -0.77
FAM228B-209ENST00000615135 C9orf131Q5VYM1 1079 aa10.21□□□□□ -0.77
FAM228B-209ENST00000615135 ARHGAP27Q6ZUM4 889 aa10.21□□□□□ -0.77
FAM228B-209ENST00000615135 RGS19P49795 217 aa10.2□□□□□ -0.78
FAM228B-209ENST00000615135 FAM161AQ3B820 660 aa10.2□□□□□ -0.78
FAM228B-209ENST00000615135 KCPQ6ZWJ8 1503 aa10.2□□□□□ -0.78
FAM228B-209ENST00000615135 USP31Q70CQ4 1352 aa10.2□□□□□ -0.78
FAM228B-209ENST00000615135 AMIGO3Q86WK7 504 aa10.2□□□□□ -0.78
FAM228B-209ENST00000615135 ANKRD24Q8TF21 1146 aa10.2□□□□□ -0.78
FAM228B-209ENST00000615135 RRAGCQ9HB90 399 aa10.2□□□□□ -0.78
FAM228B-209ENST00000615135 TNRC6CQ9HCJ0 1690 aaKnown RBP10.2□□□□□ -0.78
FAM228B-209ENST00000615135 TOGARAM1Q9Y4F4 1720 aa10.2□□□□□ -0.78
FAM228B-209ENST00000615135 UBR3Q6ZT12 1888 aa10.19□□□□□ -0.78
FAM228B-209ENST00000615135 NBR1Q14596 966 aa10.19□□□□□ -0.78
FAM228B-209ENST00000615135 BCS1LQ9Y276 419 aa10.19□□□□□ -0.78
FAM228B-209ENST00000615135 KIAA1210Q9ULL0 1709 aa10.19□□□□□ -0.78
FAM228B-209ENST00000615135 NSD3Q9BZ95 1437 aa10.18□□□□□ -0.78
FAM228B-209ENST00000615135 CENPJQ9HC77 1338 aaPredicted RBP10.18□□□□□ -0.78
FAM228B-209ENST00000615135 GALR2O43603 387 aaPredicted RBP10.18□□□□□ -0.78
FAM228B-209ENST00000615135 BRCA1P38398 1863 aaKnown RBP10.18□□□□□ -0.78
FAM228B-209ENST00000615135 C4BP0C0L5 1744 aa10.18□□□□□ -0.78
FAM228B-209ENST00000615135 PKD1L3Q7Z443 1732 aa10.18□□□□□ -0.78
FAM228B-209ENST00000615135 ARFGEF1Q9Y6D6 1849 aa10.17□□□□□ -0.78
FAM228B-209ENST00000615135 N4BP2Q86UW6 1770 aaPredicted RBP10.17□□□□□ -0.78
FAM228B-209ENST00000615135 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.17□□□□□ -0.78
FAM228B-209ENST00000615135 FOXN1O15353 648 aa10.17□□□□□ -0.78
FAM228B-209ENST00000615135 SSFA2P28290 1259 aa10.17□□□□□ -0.78
FAM228B-209ENST00000615135 ZCRB1Q8TBF4 217 aaKnown RBP10.17□□□□□ -0.78
FAM228B-209ENST00000615135 LTN1O94822 1766 aa10.16□□□□□ -0.78
FAM228B-209ENST00000615135 A0A0G2JLW4 131 aa10.16□□□□□ -0.78
FAM228B-209ENST00000615135 KCNA3P22001 575 aa10.16□□□□□ -0.78
FAM228B-209ENST00000615135 FAM208AQ9UK61 1670 aaKnown RBP10.15□□□□□ -0.78
FAM228B-209ENST00000615135 SBF1O95248 1867 aa10.15□□□□□ -0.78
FAM228B-209ENST00000615135 ZC3H4Q9UPT8 1303 aaKnown RBP10.15□□□□□ -0.78
FAM228B-209ENST00000615135 FCHSD2O94868 740 aa10.15□□□□□ -0.78
FAM228B-209ENST00000615135 DPEP1P16444 411 aa10.15□□□□□ -0.78
FAM228B-209ENST00000615135 EIF4G2P78344 907 aaKnown RBP eCLIP10.15□□□□□ -0.78
FAM228B-209ENST00000615135 MLLT1Q03111 559 aaPredicted RBP10.15□□□□□ -0.78
FAM228B-209ENST00000615135 NBPF1Q3BBV0 1214 aa10.15□□□□□ -0.78
FAM228B-209ENST00000615135 SMIM5Q71RC9 77 aa10.15□□□□□ -0.78
FAM228B-209ENST00000615135 IP6K1Q92551 441 aa10.15□□□□□ -0.78
FAM228B-209ENST00000615135 ABHD8Q96I13 439 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms