RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 CCDC173Q0VFZ6 552 aa13.85□□□□□ -0.19
ATF3-211ENST00000613954 BRINP3Q76B58 766 aa13.85□□□□□ -0.19
ATF3-211ENST00000613954 ANP32BQ92688 251 aaKnown RBP13.85□□□□□ -0.19
ATF3-211ENST00000613954 MED1Q15648 1581 aaPredicted RBP13.84□□□□□ -0.19
ATF3-211ENST00000613954 MTHFSDQ2M296 383 aaKnown RBP13.84□□□□□ -0.19
ATF3-211ENST00000613954 TBC1D9Q6ZT07 1266 aa13.84□□□□□ -0.19
ATF3-211ENST00000613954 CDC45O75419 566 aa13.83□□□□□ -0.2
ATF3-211ENST00000613954 DCTN1Q14203 1278 aa13.83□□□□□ -0.2
ATF3-211ENST00000613954 MBIPQ9NS73 344 aa13.83□□□□□ -0.2
ATF3-211ENST00000613954 SLAIN2Q9P270 581 aa13.83□□□□□ -0.2
ATF3-211ENST00000613954 HSP90AA2PQ14568 343 aaPredicted RBP13.83□□□□□ -0.2
ATF3-211ENST00000613954 KLHL40Q2TBA0 621 aa13.83□□□□□ -0.2
ATF3-211ENST00000613954 MRPL50Q8N5N7 158 aaKnown RBP13.83□□□□□ -0.2
ATF3-211ENST00000613954 SPATA31A3Q5VYP0 1347 aa13.83□□□□□ -0.2
ATF3-211ENST00000613954 PLEKHG5O94827 1062 aa13.82□□□□□ -0.2
ATF3-211ENST00000613954 GAS2L3Q86XJ1 694 aa13.82□□□□□ -0.2
ATF3-211ENST00000613954 HTATSF1O43719 755 aaKnown RBP13.81□□□□□ -0.2
ATF3-211ENST00000613954 VAMP4O75379 141 aa13.81□□□□□ -0.2
ATF3-211ENST00000613954 TPM2P07951 284 aa13.81□□□□□ -0.2
ATF3-211ENST00000613954 RABEP1Q15276 862 aa13.81□□□□□ -0.2
ATF3-211ENST00000613954 NBPF6Q5VWK0 638 aa13.81□□□□□ -0.2
ATF3-211ENST00000613954 MCM10Q7L590 875 aa13.81□□□□□ -0.2
ATF3-211ENST00000613954 RTF1Q92541 710 aaKnown RBP13.81□□□□□ -0.2
ATF3-211ENST00000613954 NBPF4Q96M43 638 aa13.81□□□□□ -0.2
ATF3-211ENST00000613954 PPP1R9BQ96SB3 815 aa13.81□□□□□ -0.2
ATF3-211ENST00000613954 ABCC4O15439 1325 aa13.81□□□□□ -0.2
ATF3-211ENST00000613954 NUCB2P80303 420 aa13.81□□□□□ -0.2
ATF3-211ENST00000613954 ERBB4Q15303 1308 aa13.8□□□□□ -0.2
ATF3-211ENST00000613954 USHBP1Q8N6Y0 703 aa13.8□□□□□ -0.2
ATF3-211ENST00000613954 API5Q9BZZ5 524 aaKnown RBP13.8□□□□□ -0.2
ATF3-211ENST00000613954 CRB1P82279 1406 aa13.8□□□□□ -0.2
ATF3-211ENST00000613954 NCAPD2Q15021 1401 aa13.8□□□□□ -0.2
ATF3-211ENST00000613954 CHL1O00533 1208 aa13.8□□□□□ -0.2
ATF3-211ENST00000613954 NASPP49321 788 aaPredicted RBP13.8□□□□□ -0.2
ATF3-211ENST00000613954 ANKRD24Q8TF21 1146 aa13.8□□□□□ -0.2
ATF3-211ENST00000613954 ZC3H6P61129 1189 aaKnown RBP13.79□□□□□ -0.2
ATF3-211ENST00000613954 ABCC6O95255 1503 aa13.79□□□□□ -0.2
ATF3-211ENST00000613954 CRYBG1Q9Y4K1 1723 aa13.78□□□□□ -0.2
ATF3-211ENST00000613954 MAP3K5Q99683 1374 aa13.78□□□□□ -0.2
ATF3-211ENST00000613954 CAMTA1Q9Y6Y1 1673 aa13.78□□□□□ -0.2
ATF3-211ENST00000613954 SOS2Q07890 1332 aaPredicted RBP13.78□□□□□ -0.2
ATF3-211ENST00000613954 GNAT3A8MTJ3 354 aa13.78□□□□□ -0.2
ATF3-211ENST00000613954 CD2BP2O95400 341 aaKnown RBP13.78□□□□□ -0.2
ATF3-211ENST00000613954 BAG4O95429 457 aaKnown RBP13.78□□□□□ -0.2
ATF3-211ENST00000613954 PKNOX2Q96KN3 472 aa13.78□□□□□ -0.2
ATF3-211ENST00000613954 DDX49Q9Y6V7 483 aaKnown RBP13.78□□□□□ -0.2
ATF3-211ENST00000613954 SSFA2P28290 1259 aa13.78□□□□□ -0.2
ATF3-211ENST00000613954 LRRC59Q96AG4 307 aaKnown RBP13.78□□□□□ -0.2
ATF3-211ENST00000613954 AXIN2Q9Y2T1 843 aa13.78□□□□□ -0.2
ATF3-211ENST00000613954 RGPD2P0DJD1 1756 aa13.78□□□□□ -0.2
ATF3-211ENST00000613954 LRRC37A3O60309 1634 aa13.77□□□□□ -0.2
ATF3-211ENST00000613954 TWISTNBQ3B726 338 aaPredicted RBP13.77□□□□□ -0.21
ATF3-211ENST00000613954 ZSCAN30Q86W11 494 aa13.77□□□□□ -0.21
ATF3-211ENST00000613954 TSPYL6Q8N831 410 aa13.77□□□□□ -0.21
ATF3-211ENST00000613954 CWC22Q9HCG8 908 aaKnown RBP13.77□□□□□ -0.21
ATF3-211ENST00000613954 ZNF445P59923 1031 aa13.76□□□□□ -0.21
ATF3-211ENST00000613954 HS1BP3Q53T59 392 aa13.76□□□□□ -0.21
ATF3-211ENST00000613954 SIRT2Q8IXJ6 389 aa13.76□□□□□ -0.21
ATF3-211ENST00000613954 C8orf58Q8NAV2 365 aa13.76□□□□□ -0.21
ATF3-211ENST00000613954 C1orf115Q9H7X2 142 aa13.76□□□□□ -0.21
ATF3-211ENST00000613954 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
ATF3-211ENST00000613954 KIAA0232Q92628 1395 aa13.76□□□□□ -0.21
ATF3-211ENST00000613954 ERBB3P21860 1342 aa13.76□□□□□ -0.21
ATF3-211ENST00000613954 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
ATF3-211ENST00000613954 CASC1Q6TDU7 716 aa13.76□□□□□ -0.21
ATF3-211ENST00000613954 CABLES1Q8TDN4 633 aa13.76□□□□□ -0.21
ATF3-211ENST00000613954 CPDO75976 1380 aa13.76□□□□□ -0.21
ATF3-211ENST00000613954 COL18A1P39060 1754 aa13.75□□□□□ -0.21
ATF3-211ENST00000613954 INTS3Q68E01 1043 aaKnown RBP13.75□□□□□ -0.21
ATF3-211ENST00000613954 RBM42Q9BTD8 480 aaKnown RBP13.75□□□□□ -0.21
ATF3-211ENST00000613954 DCTPP1Q9H773 170 aa13.75□□□□□ -0.21
ATF3-211ENST00000613954 RGPD5Q99666 1765 aa13.75□□□□□ -0.21
ATF3-211ENST00000613954 LMO7Q8WWI1 1683 aa13.75□□□□□ -0.21
ATF3-211ENST00000613954 MSNP26038 577 aaKnown RBP13.74□□□□□ -0.21
ATF3-211ENST00000613954 TERF1P54274 439 aa13.74□□□□□ -0.21
ATF3-211ENST00000613954 PLEKHO1Q53GL0 409 aaPredicted RBP13.74□□□□□ -0.21
ATF3-211ENST00000613954 PLEKHM2Q8IWE5 1019 aa13.74□□□□□ -0.21
ATF3-211ENST00000613954 NHSL1Q5SYE7 1610 aa13.74□□□□□ -0.21
ATF3-211ENST00000613954 ELL2O00472 640 aaPredicted RBP13.74□□□□□ -0.21
ATF3-211ENST00000613954 AMOTQ4VCS5 1084 aa13.74□□□□□ -0.21
ATF3-211ENST00000613954 TTC22Q5TAA0 569 aa13.74□□□□□ -0.21
ATF3-211ENST00000613954 ST18O60284 1047 aa13.73□□□□□ -0.21
ATF3-211ENST00000613954 CYP2E1P05181 493 aaPredicted RBP13.73□□□□□ -0.21
ATF3-211ENST00000613954 GSPT1P15170 499 aaKnown RBP13.73□□□□□ -0.21
ATF3-211ENST00000613954 TSPYL4Q9UJ04 414 aa13.73□□□□□ -0.21
ATF3-211ENST00000613954 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.73□□□□□ -0.21
ATF3-211ENST00000613954 IL17REQ8NFR9 667 aa13.73□□□□□ -0.21
ATF3-211ENST00000613954 USP26Q9BXU7 913 aa13.73□□□□□ -0.21
ATF3-211ENST00000613954 BABAM1Q9NWV8 329 aa13.73□□□□□ -0.21
ATF3-211ENST00000613954 FAM208AQ9UK61 1670 aaKnown RBP13.72□□□□□ -0.21
ATF3-211ENST00000613954 ZNF530Q6P9A1 599 aaPredicted RBP13.72□□□□□ -0.21
ATF3-211ENST00000613954 RPAP2Q8IXW5 612 aaPredicted RBP13.72□□□□□ -0.21
ATF3-211ENST00000613954 OFD1O75665 1012 aa13.71□□□□□ -0.21
ATF3-211ENST00000613954 AKAP4Q5JQC9 854 aa13.71□□□□□ -0.21
ATF3-211ENST00000613954 CEMIPQ8WUJ3 1361 aa13.71□□□□□ -0.21
ATF3-211ENST00000613954 TAF7Q15545 349 aaPredicted RBP13.71□□□□□ -0.22
ATF3-211ENST00000613954 CHRNA2Q15822 529 aa13.71□□□□□ -0.22
ATF3-211ENST00000613954 MCTP1Q6DN14 999 aa13.71□□□□□ -0.22
ATF3-211ENST00000613954 NLRP2Q9NX02 1062 aa13.71□□□□□ -0.22
ATF3-211ENST00000613954 MIS18AQ9NYP9 233 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 228.8 ms