RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 NEFHP12036 1026 aa6.92□□□□□ -1.3
CCL16-206ENST00000613642 LIG1P18858 919 aa6.92□□□□□ -1.3
CCL16-206ENST00000613642 POLD1P28340 1107 aa6.92□□□□□ -1.3
CCL16-206ENST00000613642 CTHP32929 405 aa6.92□□□□□ -1.3
CCL16-206ENST00000613642 ZRSR2Q15696 482 aaKnown RBP6.92□□□□□ -1.3
CCL16-206ENST00000613642 PRPF38BQ5VTL8 546 aaKnown RBP6.92□□□□□ -1.3
CCL16-206ENST00000613642 KRBA2Q6ZNG9 492 aa6.92□□□□□ -1.3
CCL16-206ENST00000613642 NGEFQ8N5V2 710 aa6.92□□□□□ -1.3
CCL16-206ENST00000613642 FAM174AQ8TBP5 190 aa6.92□□□□□ -1.3
CCL16-206ENST00000613642 ITFG2Q969R8 447 aa6.92□□□□□ -1.3
CCL16-206ENST00000613642 MYCBPQ99417 103 aaPredicted RBP6.92□□□□□ -1.3
CCL16-206ENST00000613642 HIRIP3Q9BW71 556 aaPredicted RBP6.92□□□□□ -1.3
CCL16-206ENST00000613642 CCER2I3L3R5 266 aa6.91□□□□□ -1.3
CCL16-206ENST00000613642 APBB1O00213 710 aa6.91□□□□□ -1.3
CCL16-206ENST00000613642 TRIM66O15016 1216 aa6.91□□□□□ -1.3
CCL16-206ENST00000613642 ADH1CP00326 375 aa6.91□□□□□ -1.3
CCL16-206ENST00000613642 VEGFBP49765 207 aa6.91□□□□□ -1.3
CCL16-206ENST00000613642 WDR4P57081 412 aaKnown RBP6.91□□□□□ -1.3
CCL16-206ENST00000613642 CSPP1Q1MSJ5 1256 aa6.91□□□□□ -1.3
CCL16-206ENST00000613642 CXorf38Q8TB03 319 aa6.91□□□□□ -1.3
CCL16-206ENST00000613642 UBA5Q9GZZ9 404 aa6.91□□□□□ -1.3
CCL16-206ENST00000613642 CEP126Q9P2H0 1117 aa6.91□□□□□ -1.3
CCL16-206ENST00000613642 ERBB4Q15303 1308 aa6.91□□□□□ -1.3
CCL16-206ENST00000613642 GOLGA6CA6NDK9 693 aa6.9□□□□□ -1.3
CCL16-206ENST00000613642 GOLGA6BA6NDN3 693 aa6.9□□□□□ -1.3
CCL16-206ENST00000613642 ARID3CA6NKF2 412 aa6.9□□□□□ -1.3
CCL16-206ENST00000613642 KIF1CO43896 1103 aaKnown RBP6.9□□□□□ -1.3
CCL16-206ENST00000613642 GOLGA6DP0CG33 693 aa6.9□□□□□ -1.3
CCL16-206ENST00000613642 CTR9Q6PD62 1173 aa6.9□□□□□ -1.3
CCL16-206ENST00000613642 DDX46Q7L014 1031 aaKnown RBP6.9□□□□□ -1.3
CCL16-206ENST00000613642 APBB1IPQ7Z5R6 666 aaPredicted RBP6.9□□□□□ -1.3
CCL16-206ENST00000613642 ZNF513Q8N8E2 541 aaPredicted RBP6.9□□□□□ -1.3
CCL16-206ENST00000613642 FOXJ1Q92949 421 aa6.9□□□□□ -1.3
CCL16-206ENST00000613642 ZBTB3Q9H5J0 574 aa6.9□□□□□ -1.3
CCL16-206ENST00000613642 RRAGDQ9NQL2 400 aaPredicted RBP6.9□□□□□ -1.3
CCL16-206ENST00000613642 GOLGA6AQ9NYA3 693 aa6.9□□□□□ -1.3
CCL16-206ENST00000613642 MAP10Q9P2G4 905 aa6.9□□□□□ -1.3
CCL16-206ENST00000613642 ANAPC4Q9UJX5 808 aa6.9□□□□□ -1.3
CCL16-206ENST00000613642 FAM181BA6NEQ2 426 aa6.89□□□□□ -1.31
CCL16-206ENST00000613642 MCCD1P59942 119 aaPredicted RBP6.89□□□□□ -1.31
CCL16-206ENST00000613642 SCARF1Q14162 830 aa6.89□□□□□ -1.31
CCL16-206ENST00000613642 UVSSAQ2YD98 709 aa6.89□□□□□ -1.31
CCL16-206ENST00000613642 LONRF3Q496Y0 759 aa6.89□□□□□ -1.31
CCL16-206ENST00000613642 C4orf48Q5BLP8 95 aa6.89□□□□□ -1.31
CCL16-206ENST00000613642 RIC3Q7Z5B4 369 aa6.89□□□□□ -1.31
CCL16-206ENST00000613642 ZSCAN1Q8NBB4 408 aa6.89□□□□□ -1.31
CCL16-206ENST00000613642 MNS1Q8NEH6 495 aa6.89□□□□□ -1.31
CCL16-206ENST00000613642 GZF1Q9H116 711 aaPredicted RBP6.89□□□□□ -1.31
CCL16-206ENST00000613642 MARCH6O60337 910 aa6.88□□□□□ -1.31
CCL16-206ENST00000613642 CCDC172P0C7W6 258 aa6.88□□□□□ -1.31
CCL16-206ENST00000613642 SCP2P22307 547 aa6.88□□□□□ -1.31
CCL16-206ENST00000613642 GRM5P41594 1212 aa6.88□□□□□ -1.31
CCL16-206ENST00000613642 ZNF280DQ6N043 979 aa6.88□□□□□ -1.31
CCL16-206ENST00000613642 CACTIN-AS1Q8N1I8 211 aa6.88□□□□□ -1.31
CCL16-206ENST00000613642 HELBQ8NG08 1087 aaPredicted RBP6.88□□□□□ -1.31
CCL16-206ENST00000613642 PURBQ96QR8 312 aaKnown RBP6.88□□□□□ -1.31
CCL16-206ENST00000613642 FRMD4BQ9Y2L6 1034 aa6.88□□□□□ -1.31
CCL16-206ENST00000613642 PPME1Q9Y570 386 aa6.88□□□□□ -1.31
CCL16-206ENST00000613642 CCDC66A2RUB6 948 aa6.87□□□□□ -1.31
CCL16-206ENST00000613642 PER1O15534 1290 aaPredicted RBP6.87□□□□□ -1.31
CCL16-206ENST00000613642 NR3C2P08235 984 aa6.87□□□□□ -1.31
CCL16-206ENST00000613642 ZSCAN20P17040 1043 aaPredicted RBP6.87□□□□□ -1.31
CCL16-206ENST00000613642 SSFA2P28290 1259 aa6.87□□□□□ -1.31
CCL16-206ENST00000613642 NR5A1Q13285 461 aa6.87□□□□□ -1.31
CCL16-206ENST00000613642 NEUROD2Q15784 382 aa6.87□□□□□ -1.31
CCL16-206ENST00000613642 TUSC1Q2TAM9 212 aa6.87□□□□□ -1.31
CCL16-206ENST00000613642 RNF217Q8TC41 542 aa6.87□□□□□ -1.31
CCL16-206ENST00000613642 CABLES1Q8TDN4 633 aa6.87□□□□□ -1.31
CCL16-206ENST00000613642 AK7Q96M32 723 aa6.87□□□□□ -1.31
CCL16-206ENST00000613642 UNC13AQ9UPW8 1703 aa6.87□□□□□ -1.31
CCL16-206ENST00000613642 CFAP65Q6ZU64 1925 aaKnown RBP6.86□□□□□ -1.31
CCL16-206ENST00000613642 SOBPA7XYQ1 873 aa6.86□□□□□ -1.31
CCL16-206ENST00000613642 ESPNB1AK53 854 aa6.86□□□□□ -1.31
CCL16-206ENST00000613642 EXOC5O00471 708 aa6.86□□□□□ -1.31
CCL16-206ENST00000613642 DHX16O60231 1041 aaKnown RBP6.86□□□□□ -1.31
CCL16-206ENST00000613642 VSIG8P0DPA2 414 aa6.86□□□□□ -1.31
CCL16-206ENST00000613642 CDC37Q16543 378 aaPredicted RBP6.86□□□□□ -1.31
CCL16-206ENST00000613642 CCDC181Q5TID7 509 aa6.86□□□□□ -1.31
CCL16-206ENST00000613642 BPHLQ86WA6 291 aaPredicted RBP6.86□□□□□ -1.31
CCL16-206ENST00000613642 ITPKCQ96DU7 683 aa6.86□□□□□ -1.31
CCL16-206ENST00000613642 SPATA32Q96LK8 384 aa6.86□□□□□ -1.31
CCL16-206ENST00000613642 CCDC94Q9BW85 323 aaPredicted RBP6.86□□□□□ -1.31
CCL16-206ENST00000613642 SUDS3Q9H7L9 328 aaPredicted RBP6.86□□□□□ -1.31
CCL16-206ENST00000613642 ZFAND3Q9H8U3 227 aa6.86□□□□□ -1.31
CCL16-206ENST00000613642 MAGEC2Q9UBF1 373 aaPredicted RBP6.86□□□□□ -1.31
CCL16-206ENST00000613642 KIF16BQ96L93 1317 aa6.85□□□□□ -1.31
CCL16-206ENST00000613642 LILRB3O75022 631 aa6.85□□□□□ -1.31
CCL16-206ENST00000613642 ZIC2O95409 532 aaPredicted RBP6.85□□□□□ -1.31
CCL16-206ENST00000613642 ZNF853P0CG23 659 aa6.85□□□□□ -1.31
CCL16-206ENST00000613642 ARID5BQ14865 1188 aa6.85□□□□□ -1.31
CCL16-206ENST00000613642 SH3RF1Q7Z6J0 888 aa6.85□□□□□ -1.31
CCL16-206ENST00000613642 CCDC97Q96F63 343 aaPredicted RBP6.85□□□□□ -1.31
CCL16-206ENST00000613642 NCAPGQ9BPX3 1015 aa6.85□□□□□ -1.31
CCL16-206ENST00000613642 BRMS1Q9HCU9 246 aa6.85□□□□□ -1.31
CCL16-206ENST00000613642 SMC4Q9NTJ3 1288 aa6.85□□□□□ -1.31
CCL16-206ENST00000613642 LIMD1Q9UGP4 676 aa6.85□□□□□ -1.31
CCL16-206ENST00000613642 KNSTRNQ9Y448 316 aa6.85□□□□□ -1.31
CCL16-206ENST00000613642 MPHOSPH10O00566 681 aaKnown RBP6.84□□□□□ -1.31
CCL16-206ENST00000613642 CTAGE5O15320 804 aa6.84□□□□□ -1.31
CCL16-206ENST00000613642 SMARCA5O60264 1052 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms