RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 ABCA6Q8N139 1617 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 ANKRD1Q15327 319 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 CCDC158Q5M9N0 1113 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 RIMBP3CA6NJZ7 1639 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 RIMBP3BA6NNM3 1639 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 RIMBP3Q9UFD9 1639 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 C1orf115Q9H7X2 142 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 TBC1D2BQ9UPU7 963 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 A2ML1A8K2U0 1454 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 CLCN1P35523 988 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 FSD1Q9BTV5 496 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 UQCRHLA0A096LP55 91 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 UQCRHP07919 91 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 GPS2Q13227 327 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 HOMEZQ8IX15 550 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 DNAAF4Q8WXU2 420 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.44□□□□□ -0.74
PDE6A-204ENST00000613228 CCDC39Q9UFE4 941 aa10.44□□□□□ -0.74
PDE6A-204ENST00000613228 FOXO3O43524 673 aa10.43□□□□□ -0.74
PDE6A-204ENST00000613228 TMOD3Q9NYL9 352 aa10.43□□□□□ -0.74
PDE6A-204ENST00000613228 MED14O60244 1454 aa10.43□□□□□ -0.74
PDE6A-204ENST00000613228 LETM1O95202 739 aaPredicted RBP10.43□□□□□ -0.74
PDE6A-204ENST00000613228 ZC3H6P61129 1189 aaKnown RBP10.43□□□□□ -0.74
PDE6A-204ENST00000613228 POLR1AO95602 1720 aaPredicted RBP10.43□□□□□ -0.74
PDE6A-204ENST00000613228 ZHX1Q9UKY1 873 aaPredicted RBP10.43□□□□□ -0.74
PDE6A-204ENST00000613228 DEPDC5O75140 1603 aa10.43□□□□□ -0.74
PDE6A-204ENST00000613228 HOXB7P09629 217 aa10.43□□□□□ -0.74
PDE6A-204ENST00000613228 HOXC9P31274 260 aa10.43□□□□□ -0.74
PDE6A-204ENST00000613228 FLIIQ13045 1269 aa10.43□□□□□ -0.74
PDE6A-204ENST00000613228 DNAJC2Q99543 621 aaKnown RBP10.43□□□□□ -0.74
PDE6A-204ENST00000613228 RBM42Q9BTD8 480 aaKnown RBP10.43□□□□□ -0.74
PDE6A-204ENST00000613228 GNL3LQ9NVN8 582 aaKnown RBP10.43□□□□□ -0.74
PDE6A-204ENST00000613228 SMC3Q9UQE7 1217 aa10.43□□□□□ -0.74
PDE6A-204ENST00000613228 BRD2P25440 801 aaKnown RBP10.42□□□□□ -0.74
PDE6A-204ENST00000613228 TSPOAP1O95153 1857 aa10.42□□□□□ -0.74
PDE6A-204ENST00000613228 C20orf194Q5TEA3 1177 aa10.42□□□□□ -0.74
PDE6A-204ENST00000613228 DRC7Q8IY82 874 aa10.42□□□□□ -0.74
PDE6A-204ENST00000613228 VPS37DQ86XT2 251 aa10.42□□□□□ -0.74
PDE6A-204ENST00000613228 THUMPD2Q9BTF0 503 aaKnown RBP10.42□□□□□ -0.74
PDE6A-204ENST00000613228 ARHGEF40Q8TER5 1519 aa10.42□□□□□ -0.74
PDE6A-204ENST00000613228 ALKQ9UM73 1620 aa10.42□□□□□ -0.74
PDE6A-204ENST00000613228 SRGAP3O43295 1099 aa10.42□□□□□ -0.74
PDE6A-204ENST00000613228 ALDH1L1O75891 902 aa10.42□□□□□ -0.74
PDE6A-204ENST00000613228 XPCQ01831 940 aaPredicted RBP10.42□□□□□ -0.74
PDE6A-204ENST00000613228 AKAP17AQ02040 695 aaKnown RBP10.41□□□□□ -0.74
PDE6A-204ENST00000613228 AKAP2Q9Y2D5 859 aa10.41□□□□□ -0.74
PDE6A-204ENST00000613228 VWDEQ8N2E2 1590 aa10.41□□□□□ -0.74
PDE6A-204ENST00000613228 TTC39AQ5SRH9 613 aa10.41□□□□□ -0.74
PDE6A-204ENST00000613228 GTPBP4Q9BZE4 634 aaKnown RBP10.41□□□□□ -0.74
PDE6A-204ENST00000613228 ERICH2A1L162 156 aa10.41□□□□□ -0.74
PDE6A-204ENST00000613228 TRIM29Q14134 588 aa10.41□□□□□ -0.74
PDE6A-204ENST00000613228 ZSCAN31Q96LW9 406 aaPredicted RBP10.41□□□□□ -0.74
PDE6A-204ENST00000613228 NEUROD6Q96NK8 337 aa10.41□□□□□ -0.74
PDE6A-204ENST00000613228 KIAA0232Q92628 1395 aa10.41□□□□□ -0.74
PDE6A-204ENST00000613228 NPHP4O75161 1426 aaPredicted RBP10.41□□□□□ -0.74
PDE6A-204ENST00000613228 DCTN1Q14203 1278 aa10.41□□□□□ -0.74
PDE6A-204ENST00000613228 HSP90AB2PQ58FF8 381 aa10.41□□□□□ -0.74
PDE6A-204ENST00000613228 BMP2KLQ5H9B9 411 aa10.41□□□□□ -0.74
PDE6A-204ENST00000613228 AEBP1Q8IUX7 1158 aa10.41□□□□□ -0.74
PDE6A-204ENST00000613228 NRXN1Q9ULB1 1477 aa10.41□□□□□ -0.74
PDE6A-204ENST00000613228 GLRX3O76003 335 aaKnown RBP10.4□□□□□ -0.74
PDE6A-204ENST00000613228 KRT32Q14532 448 aa10.4□□□□□ -0.74
PDE6A-204ENST00000613228 QRICH2Q9H0J4 1663 aa10.4□□□□□ -0.74
PDE6A-204ENST00000613228 MX1P20591 662 aa10.4□□□□□ -0.74
PDE6A-204ENST00000613228 PDCP20941 246 aa10.4□□□□□ -0.74
PDE6A-204ENST00000613228 DDX54Q8TDD1 881 aaKnown RBP10.4□□□□□ -0.74
PDE6A-204ENST00000613228 IPO4Q8TEX9 1081 aaKnown RBP10.4□□□□□ -0.74
PDE6A-204ENST00000613228 ZNF652Q9Y2D9 606 aa10.4□□□□□ -0.74
PDE6A-204ENST00000613228 KIDINS220Q9ULH0 1771 aa10.4□□□□□ -0.74
PDE6A-204ENST00000613228 K7ELQ4 463 aaPredicted RBP10.4□□□□□ -0.74
PDE6A-204ENST00000613228 SNRPA1P09661 255 aaKnown RBP10.4□□□□□ -0.74
PDE6A-204ENST00000613228 NUCB1Q02818 461 aa10.4□□□□□ -0.74
PDE6A-204ENST00000613228 CCDC57Q2TAC2 916 aa10.4□□□□□ -0.74
PDE6A-204ENST00000613228 CDK12Q9NYV4 1490 aaPredicted RBP10.4□□□□□ -0.74
PDE6A-204ENST00000613228 DDX49Q9Y6V7 483 aaKnown RBP10.4□□□□□ -0.75
PDE6A-204ENST00000613228 FOXD4L1Q9NU39 408 aa10.39□□□□□ -0.75
PDE6A-204ENST00000613228 NOL8Q76FK4 1167 aaKnown RBP10.39□□□□□ -0.75
PDE6A-204ENST00000613228 NCKAP5LQ9HCH0 1330 aa10.39□□□□□ -0.75
PDE6A-204ENST00000613228 RALYLQ86SE5 291 aaKnown RBP10.39□□□□□ -0.75
PDE6A-204ENST00000613228 RBM33Q96EV2 1170 aaKnown RBP10.39□□□□□ -0.75
PDE6A-204ENST00000613228 MAP3K19Q56UN5 1328 aa10.39□□□□□ -0.75
PDE6A-204ENST00000613228 PRDM10Q9NQV6 1147 aa10.39□□□□□ -0.75
PDE6A-204ENST00000613228 METP08581 1390 aa10.39□□□□□ -0.75
PDE6A-204ENST00000613228 A0A087WZG4 1122 aa10.39□□□□□ -0.75
PDE6A-204ENST00000613228 DHX16O60231 1041 aaKnown RBP10.39□□□□□ -0.75
PDE6A-204ENST00000613228 MYL6BP14649 208 aa10.39□□□□□ -0.75
PDE6A-204ENST00000613228 NASPP49321 788 aaPredicted RBP10.39□□□□□ -0.75
PDE6A-204ENST00000613228 USHBP1Q8N6Y0 703 aa10.39□□□□□ -0.75
PDE6A-204ENST00000613228 TOMM22Q9NS69 142 aa10.39□□□□□ -0.75
PDE6A-204ENST00000613228 MTHFSDQ2M296 383 aaKnown RBP10.38□□□□□ -0.75
PDE6A-204ENST00000613228 AXDND1Q5T1B0 1012 aaPredicted RBP10.38□□□□□ -0.75
PDE6A-204ENST00000613228 AACSQ86V21 672 aa10.38□□□□□ -0.75
PDE6A-204ENST00000613228 CPLX1O14810 134 aa10.38□□□□□ -0.75
PDE6A-204ENST00000613228 VAMP4O75379 141 aa10.38□□□□□ -0.75
PDE6A-204ENST00000613228 SF3A1Q15459 793 aaKnown RBP10.38□□□□□ -0.75
PDE6A-204ENST00000613228 CTNNA3Q9UI47 895 aa10.38□□□□□ -0.75
PDE6A-204ENST00000613228 MPRIPQ6WCQ1 1025 aa10.38□□□□□ -0.75
PDE6A-204ENST00000613228 CNNM1Q9NRU3 951 aa10.38□□□□□ -0.75
PDE6A-204ENST00000613228 BCORL1Q5H9F3 1711 aa10.38□□□□□ -0.75
PDE6A-204ENST00000613228 GRPEL1Q9HAV7 217 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms